Displaying 20 results from an estimated 1000 matches similar to: "O/T good c/c++ code for LU decomposition"
2010 Jul 17
1
How to generate PDF help file for our internal R package?
Currently, we have developed an R package for our company's internal use (at
least for now). I have successfully built the package and generated zip
file which can be easily installed. However, I am not sure how to generate
the big HELP file in PDF.
Right now, I have about 30+ Rd files for this internal package. I can run 'R
CMD Rd2dvi' and WinEdt to create one pdf file
2010 Jul 26
1
problem with building package on CRAN
Dear friends,
I have just gotten a strange error message back from Uwe saying
that the most recent version of psych failed to pass R CMD check for
Windows.
The error message was less than helpful, in that it seems to have
failed when trying to include the Rcpp library, which I do not
directly call. (see below)
"* using log directory
2011 Apr 15
1
[Rcpp-devel] Find number of elements less than some number: Elegant/fastsolution needed
On Thu, Apr 14, 2011 at 7:02 PM,
<rcpp-devel-request at r-forge.wu-wien.ac.at> wrote:
> I was able to write a very short C++ function using the Rcpp package
> that provided about a 1000-fold increase in speed relative to the best
> I could do in R. ?I don't have the script on this computer so I will
> post it tomorrow when I am back on the computer at the office.
>
>
2013 Feb 01
2
Armadillo error in R extension
Is there anyway with some experience in using armadillo in R C++ extensions?
My problem is the following:
I programmed a function in a header looking like
#include <armadillo>
inline arma::vec foo(input) {
... do something
return an arma::vec object
}
compiling this via R CMD INSTALL packagename (PKG_CXXFLAGS = -I/folder/of/armadillo and armadillo_bits in my package)
I get the
2018 Mar 26
2
R Lapack – why a subset?
Hi,
Why doesn't R include a full Lapack but only a subset?
My cda package (now archived) relying on RcppArmadillo has broken multiple
times on CRAN over the past few years following updates in the underlying
Armadillo library, Every time it follows the same pattern: Armadillo adds a
function to solve a specialised linear system more efficiently, and the
corresponding Lapack routine is not
2014 Jan 15
1
rbinom in RcppArmadillo?
What is the RcppArmadillo way to make binomial draws from a vector of probs,
similar to what rbinom does in R?
Thanx!
--
View this message in context: http://r.789695.n4.nabble.com/rbinom-in-RcppArmadillo-tp4683593.html
Sent from the R devel mailing list archive at Nabble.com.
2016 Jan 10
3
coerce SEXP type to C++ matrix class and back
Dear all,
I am testing a simple C++ function that takes a double matrix as
argument and which uses routines provided by the C++ Armadillo
package. I am aware of the nice capabilities of Rcpp and RcppArmadillo
which helps simplifying a lot and that I have already successfully
tested. However, I had a hard time trying to figure out how the
coercion from a REALSPX matrix to an arma::mat =
2011 Dec 05
1
RcppArmadillo compilation error: R CMD SHLIB returns status 1
Dear all,
running the example by D. Eddebuettel (http://dirk.eddelbuettel.com/blog/2011/04/23/) I get an error message. Specifically, the R code I was taking from the above example is
### BEGIN EXAMPLE ###
suppressMessages(require(RcppArmadillo))
suppressMessages(require(Rcpp))
suppressMessages(require(inline))
code <- '
arma::mat coeff = Rcpp::as<arma::mat>(a);
arma::mat
2010 Jul 28
1
How get colnames and rownames in Rcpp method?
Hi all,
How get colnames and rownames in Rcpp method?
attecthed file : RGui.exe capture
my work environment :
R version : 2.11.1
OS : WinXP Pro sp3
Thanks and best regards.
Young-Ju, Park
from Korea
[1][rKWLzcpt.zNp8gmPEwGJCA00]
[@from=dllmain&rcpt=r%2Dhelp%40r%2Dproject%2Eorg&msgid=%3C20100728211143%2EH
2023 Jan 10
1
rhub vs. CRAN fedora-*-devel, using armadillo & slapack
Dear R-devel people,
We are working to submit a package which is mainly a binding over a C++ lib (https://github.com/libKriging) using armadillo.
It is _not_ a standard RcppArmadillo package, because we also had to provide a python binding... so there is a huge layer of cmake & scripting to make it work with a standard armadillo (but using same version that RcppArmadillo).
It seems now
2023 Jan 10
1
rhub vs. CRAN fedora-*-devel, using armadillo & slapack
Le 10/01/2023 ? 11:37, Serguei Sokol a ?crit?:
> Le 10/01/2023 ? 10:44, RICHET Yann a ?crit?:
>> Dear R-devel people,
>>
>> We are working to submit a package which is mainly a binding over a
>> C++ lib (https://github.com/libKriging) using armadillo.
>> It is _not_ a standard RcppArmadillo package, because we also had to
>> provide a python binding... so
2023 Jan 10
1
rhub vs. CRAN fedora-*-devel, using armadillo & slapack
Le 10/01/2023 ? 10:44, RICHET Yann a ?crit?:
> Dear R-devel people,
>
> We are working to submit a package which is mainly a binding over a C++ lib (https://github.com/libKriging) using armadillo.
> It is _not_ a standard RcppArmadillo package, because we also had to provide a python binding... so there is a huge layer of cmake & scripting to make it work with a standard armadillo
2011 Feb 20
2
Problem using F77_CALL(dgemm) in a package
Dear R-devel,
I've written a numerical solver for SOCPs (second order cone programs)
in R, and now I want to move most of the solver code into C for speed.
I've written combined R/C packages before, but in this case I need to
do matrix operations in my C code. As I have never done that before,
I'm trying to write some simple examples to make sure I understand the
basics. I am stuck
2020 Oct 08
3
Installing package fails at "testing if installed package can be loaded from temporary location"
Hi,
I can not install packages from source which links to RcppArmadillo on
Ubuntu 20.04 (after upgrading from 18.04). The following problem occurs:
** testing if installed package can be loaded from temporary location
Error: package or namespace load failed for 'myPackage' in
dyn.load(file, DLLpath = DLLpath, ...):
unable to load shared object
2023 Jan 10
2
rhub vs. CRAN fedora-*-devel, using armadillo & slapack
Thank you for your answer.
In facts, 10 threads are asked by armadillo for some LinAlg, which backs to two threads as warned. But I cannot imagine this costs so much time just for that...
A deeper analysis of time spent seems to point that a large time was mainly spent on testthat and Rcpp dependencies compilation... But other recent packages depending on these also are not spending so much time.
2004 Nov 02
2
Matrix decomposition: orthogonal complement
Hello,
How I can compute in R the orthogonal complement of one matrix?
If A (n x m ) matrix of full column rank (n>m), its orthogonal
complement is denoted by A_ .
A_ is n X (n-m) matrix of full column rank and such that A'A_=0.
I need to compute A_. How I can compute A_ in R?
Best Regards,
/Florin
--
Florin G. Maican
Ph.D. candidate, Department of Economics
School of
2011 Feb 06
5
Help with integrating R and c/c++
Hi,
I have been using R for close to two years now and have grown quite
comfortable with the language. I am presently trying to implement an
optimization routine in R (Newton Rhapson). I have some R functions that
calculate the gradient and hessian (pre requisite matrices) fairly
efficiently. Now, I have to call this function iteratively until some
convergance criterion is reached. I think the
2015 Nov 23
3
MKL Acceleration encouraging; need adjust package builds?
Dear R-devel:
The Cluster administrators at KU got enthusiastic about testing
R-3.2.2 with Intel MKL when I asked for some BLAS integration. Below
I forward a performance report, which is encouraging, and thought you
would like to know the numbers. Appears to my untrained eye there are
some extraordinary speedups on Cholesky decomposition, determinants,
and matrix inversion.
They had
2010 Jan 23
2
About LU decomposition in R
Hi,
How can I find and download a function in R to do the LU decompostion for finding the upper and lower triangular matrix. Thank you so much.
Joe
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2010 Sep 15
2
lapack in R 2.11.1 (Ubuntu 10.04.1)
Hi there,
I'm trying to install the package RcppArmadillo in my R 2.11.1 which I installed
and regularly update via Ubuntu's repositories.
When I try to install RcppArmadillo from CRAN I get:
> install.packages('RcppArmadillo', lib='~/myRlibs')
[...]
g++ -shared -o RcppArmadillo.so RcppArmadillo.o fastLm.o
-L/home/matias/myRlibs/Rcpp/lib -lRcpp