Displaying 20 results from an estimated 7000 matches similar to: "Sweave PDF files show plot symbols as "q""
2009 Aug 21
1
sessionInfo() fails to correctly detect locale settings
Dear R devels
Yesterday I was slightly surprised to notice that R incorrectly
detected some of the locale settings. I am not sure whether this is
important, but I preferred to drop a message. In the R output below,
some entries that should have been "en_GB.UTF-8" are presented as "C".
Regards
Liviu
> sessionInfo()
R version 2.9.1 (2009-06-26)
x86_64-pc-linux-gnu
locale:
2009 Dec 21
2
checking Rd cross-references ... WARNING
Dear all
I am getting this strange error when checking my package. Would you
have an idea what causes it?
Thank you
Liviu
* checking Rd cross-references ... WARNING
Error in .find.package(package, lib.loc) :
there is no package called 'KernSmooth'
Calls: <Anonymous> -> lapply -> FUN -> .find.package
Execution halted
> sessionInfo ()
R version 2.10.0 (2009-10-26)
2010 Jul 28
1
Reading timestamp column from MySQL
Hi,
I am reading a SQL (MySQL) table in R data frame.
When I read in the table that has a timestamp data-type field, R gives it
the following format:-
1.236887e+12
So when I want to manipulate a column with timestamp = 1236887146615
It returns me multiple rows, as many timestamps gets converted to same
value: 1.236887e+12
Any ideas of how this could be dealt with, so that I can get the
2009 Nov 09
1
trouble loading JGR on Debian
Dear developers
I am unable to (properly) load JGR on Debian testing. The JGR window
will pop out and R will start up, but it will not perform any of the
JGR specific library() calls (rJava, JavaGD, etc.) and will stuck at
100% CPU while the prompt will be non-responsive. The hack that helped
previously in such cases, accessing Help > About [1], works no more.
All R packages are installed via
2009 Oct 02
1
trouble with html() in Hmisc
Dear all
On my system html() conversion of a `latex()' object fails. Follows a
dummy example:
> require(Hmisc)
> data(Angell)
> .object <- cor(Angell[,1:2], use="complete.obs")
> tmp <- latex(.object, cdec=c(2,2), title="")
> class(tmp)
[1] "latex"
> html(tmp)
/tmp/RtmprfPwzw/file7e72f7a7.tex:9: Warning: Command not found: \tabularnewline
2010 Oct 08
2
font question on pdf device
Hi,
I wonder if this is something on my machine locally or R in general.
When I do the following:
> plot(c(0,1),c(0,1),main=expression(paste(symbol("D"),"D",sep="")))
I get a plot with a title having uppercase delta followed by "D". But in
the following
> pdf(file="deltaTest.pdf")
>
2010 Nov 11
4
Troubleshooting sweave
Hi All,
I've reproduced the example from Prof. Friedrich Leisch's webpage. When I
write sweave("Example-1.Snw") OR sweave("Example-1.Rnw"), (yes, I renamed
them). I get the following error:
Writing to file example-1.tex
Processing code chunks ...
1 : echo term verbatim
Error: chunk 1
Error in library(ctest) : there is no package called 'ctest'
Also while
2009 Aug 28
1
Plotmath, sweave and lattice graphics interaction problem
Dear List,
I have hit this problem with using a plotmath expression in an axis
label on a lattice plot I'm including in a Sweave document. The actual
document is far too long and boring (unless you are interested in the
hydrochemistry of upland lakes) to include here, but the following
minimal example reproduces the problem; basically, the PDF produced by
Sweave has missing characters in the
2010 Feb 04
1
plm issues: error for "within" or "random", but not for "pooling"
Dear all
I am working on unbalanced panel data and I can readily fit a
"pooling" model using plm(), but not a "within" or "random" model.
Reproducing the examples in vignette("plm") and in the AER package I
encountered no such issues.
##unfortunately I cannot disclose the data, and it is too big anyway
> dim(ibes.kld.exp.p[x.subs , ])
[1] 13189 34
2010 Feb 25
2
error using pvcm() on unbalanced panel data
Dear all
I am trying to fit Variable Coefficients Models on Unbalanced Panel
Data. I managed to fit such models on balanced panel data (the example
from the "plm" vignette), but I failed to do so on my real, unbalanced
panel data.
I can reproduce the error on a modified example from the vignette:
> require(plm)
> data("Hedonic")
> Hed <- pvcm(mv ~ crim + zn + indus
2010 Sep 09
1
Error in normalizePath(path) : with McAfee
Dear R People:
I keep getting the "Error in normalizePath(path) :" while trying to
obtain the necessary packages to use with the "Applied Spatial
Statistics with R" book.
I turned off the Firewall (from McAfee) but am still getting the same message.
Does anyone have any idea on a solution please?
> sessionInfo()
R version 2.11.1 (2010-05-31)
i386-pc-mingw32
locale:
[1]
2011 Jul 30
1
grImport symbols
Dear list,
I have two questions regarding grid.symbols() in the grImport package.
This package allows you to import a vector graphic in R, and
grid.symbols() can be used to plot the resulting glyph at arbitrary
locations in a grid viewport.
I have tried the code in the grImport vignette, which is most
interesting, however I am stuck with two problems:
1- Is there a possibility to create a
2016 May 18
3
[patch] Error in reg-tests-1c.R (R-devel)
I get an error when running "make check" after building R-devel r70629
on Ubuntu 14.04. Here are the relevant lines in the file
"reg-tests-1c.Rout.fail":
> ## m1z uses match(x, *) with length(x) == 1 and failed in R 3.3.0
> ## PR#16909 - a consequence of the match() bug; check here too:
> dv <- data.frame(var?1 = 1:3, var?2 = 3); dv[,"var?2"]
2002 Feb 26
1
Locale problems on Solaris
Hi there.
With OpenSSH 3.0.2p1 on Solaris, the locale does not appear to get set
correctly at login, as it does with, say telnet:
/etc/default/init:
TZ=GB
CMASK=022
LC_COLLATE=en_GB.ISO8859-1
LC_CTYPE=en_GB.ISO8859-1
LC_MESSAGES=C
LC_MONETARY=en_GB.ISO8859-1
LC_NUMERIC=en_GB.ISO8859-1
LC_TIME=en_GB.ISO8859-1
When logging in via SSH:
scot /home/scot > locale
LANG=
2016 May 18
2
[patch] Error in reg-tests-1c.R (R-devel)
On 18/05/16 13:50, Martin Maechler wrote:
>>>>>> Mikko Korpela <mikko.korpela at helsinki.fi>
>>>>>> on Wed, 18 May 2016 13:05:24 +0300 writes:
>
> > I get an error when running "make check" after building
> > R-devel r70629 on Ubuntu 14.04.
> > Here are the relevant
> > lines in the file
2013 Jan 16
1
R CMD check not reading R_LIBS from ~/.R/check.Renviron
Dear List,
Further to my earlier email, I note that, for me at least, R CMD check
is *not* reading R_LIBS from ~/.R/check.Renviron on R 2.15.2 patched
(r61228) and R Under Development (r61660). The only way I can get R CMD
check to look for packages in a user-supplied library is by explicitly
exporting R_LIBS set to the relevant directory.
R CMD build *does* read R_LIBS from ~/.R/build.Renviron
2016 Apr 19
3
Problem with X11
Dear All,
I have never had this problem before. I run debian testing on my box
and I have recently update my R environment.
Now, see what happens when I try the most trivial of all plots
> plot(seq(22))
Error in (function (display = "", width, height, pointsize, gamma, bg,
:
X11 module cannot be loaded
In addition: Warning message:
In (function (display = "", width,
2007 Oct 15
1
Fonts do not display properly in R 2.5.1 on Red Hat Enterprise Linux 4
Dear All
I posted a similar question quite some time ago, but that was on an old
OS and an old version of R. This time I have RHEL 4, which is still
supported as an OS, and R 2.5.1 which is not *that* old.
My sessionInfo() gives:
> sessionInfo()
R version 2.5.1 (2007-06-27)
i686-redhat-linux-gnu
locale:
LC_CTYPE=en_GB.UTF-8;LC_NUMERIC=C;LC_TIME=en_GB.UTF-8;LC_COLLATE=en_GB.U
2008 Apr 29
2
reproducible segmentation fault caused by textConnection()
Dear all,
It seems that textConnection() can trigger a segmentation fault. The
following script (using two large loops) makes this bug reproducible:
for (i in 1:10000) {
z=textConnection(NULL,open='w')
for (j in 1:100) {
write(runif(1)*1e6,file=z)
write('\n',file=z)
}
close(z)
}
The bug could be reproduced on R-2.6.1, R-2.7.0 and on the latest
R-devel
2018 Nov 15
2
'date' format differences between CentOS 6 and 7 using the en_GB locale ?
Just noticed that the output of 'date' is different between CentOS 6 and
7 when using the 'en_GB' locale - e.g.:
CentOS 6:
% LANG=en_GB date
Thu Nov 15 11:42:46 GMT 2018
% LANG=en_US date
Thu Nov 15 11:42:56 GMT 2018
CentOS 7:
% LANG=en_GB date
Thu 15 Nov 11:43:07 GMT 2018
% LANG=en_US date
Thu Nov 15 11:43:11 GMT 2018
i.e. with LANG=en_GB on CentOS 7, the day