similar to: Running gplots package with Windows 7

Dear R community, I am using R version 2.4.1 GUI 1.18 on an iBook G4 with OS 10.4.10. When I try to load package 'gplots' I get the following message: > library(gplots) Loading required package: gdata Attaching package: 'gdata' The following object(s) are masked _by_ .GlobalEnv : reorder.factor Loading required package: gtools Attaching package: 'gtools'

Hello all, I use R on both windows and a "mainframe" linux installation (RedHat enterprise 3.0, which they tell me is soon to be upgraded to 4.0). On windows I installed the package gplots without trouble, and it works fine. When I attempted to do the same on the unix computer, the following error message was forthcoming: downloaded 216Kb * Installing *source* package

Hello, I try to handle a simple bar-plot, but it turns out to be not as simple as I thought. 1) I have created a .dat-File, e.g. test.dat: DATA DATA-SEM 2.2 0.32 6.2 1.30 12.7 1.61 48.6 3.08 4.1 0.86 4.5 0.32 1.5 1.13 1.2 1.08 The first row is the data represented by bars. The second row deals with the Standard Error of Mean. The lines correspond to time-intervals of experiments. 2) I now

I am having difficulty installing packages. For example, here I have tried to install "gplots" but to no avail. I have tried multiple mirrors and different packages (errbar) but after installation I seem to be unable to access any of the commands or help pages. I am a little concerned about the 'lib' missing message but this has been present for previous successful package

Hello, We have submitted the updated version of gdata, gmodels, gplots and gtools to CRAN. Summary of the changes is attached at the end. Best, Nitin ______________________ Nitin Jain, PhD <nitin.jain at pfizer.com> Non Clinical Statistics Pfizer, Inc. (Groton, CT) Bldg: 260, # 1451 Ph: (860) 686-2526 (Office) Fax: (860) 686-6170 Brief description of changes: CHANGES IN GDATA 2.1.2

Hello, We have submitted the updated version of gdata, gmodels, gplots and gtools to CRAN. Summary of the changes is attached at the end. Best, Nitin ______________________ Nitin Jain, PhD <nitin.jain at pfizer.com> Non Clinical Statistics Pfizer, Inc. (Groton, CT) Bldg: 260, # 1451 Ph: (860) 686-2526 (Office) Fax: (860) 686-6170 Brief description of changes: CHANGES IN GDATA 2.1.2

Hi All, I'd like to see the function code behind the barplots2() function in the gplots package, however i come across a bit of a stumbling block of a hidden function, can anyone help? > library(gplots) > methods(barplot2) [1] barplot2.default* Non-visible functions are asterisked > barplot2 function (height, ...) UseMethod("barplot2") <environment:

Given the confusions that some users have regarding package bundles, I'd like to suggest some changes to how package bundles are handled. My understanding is that a package bundle is essentially a convenient way to distribute related packages, so that users can download/install them in one shot. However, some users apparently get confused that one can do install.packages("abundle")

Given the confusions that some users have regarding package bundles, I'd like to suggest some changes to how package bundles are handled. My understanding is that a package bundle is essentially a convenient way to distribute related packages, so that users can download/install them in one shot. However, some users apparently get confused that one can do install.packages("abundle")

I had installed de "gplots" package and then I loaded the library but the package did not work. I recieved a message like this: > install.packages("gplots", dependencies = TRUE) Installing package(s) into ‘/home/fpiston/R/x86_64-pc-linux-gnu-library/2.14’ (as ‘lib’ is unspecified) --- Please select a CRAN mirror for use in this session --- Loading Tcl/Tk interface ... done

Hi list, I'm using barplot2 form the gplots package to plot a few numbers (I want to add SD bars later). However, I would like the y-axis not to start from 0 but 500. When I add the parameters YLIM, something goes wrong. The graph is not 'cut off' at 500. Instead the bars seems to sink trough the bottom of the graph. Because its a little hard to explain, here is a self-containing

I have a revised version of the gregmisc package, which I've converted into a package bundle each of which has a namespace: gplots, gmodels, gdata, gtoools. Of course, there are interdependencies among these namespaces: gsun374: /tmp [11]> cd gregmisc/ gsun374: gregmisc [12]> grep import */NAMESPACE gdata/NAMESPACE:importFrom(gtools, odd, invalid, mixedsort)

Full_Name: Ebi Hal Version: R-2.7.2-1 OS: Fedora core 9 Submission from: (NULL) (129.215.170.238) I tried to install gplots by running R> install.packages("gplots") but the process failed while installing "gtools" with the following error message: * Installing to library '/usr/lib64/R/library' * Installing *source* package 'gtools' ... ** libs gcc -m64

The issue shows when installing some packages. I was interested in using "gplots" so i ran: install.packages("gplots", dependencies=TRUE) and the outcome was something like this: Aviso en install.packages("gplots", dependencies = TRUE) : argument 'lib' is missing: using '/home/buscoverdad/R/i686-pc-linux-gnu-library/2.11' ---

I am making a barplot using barplot2 from gplots and would like to format the names of my categorical variables (tree species) on the x- axis so that the genus name is above the species name (to save room). My code so far is: speciesnames<-c("Dialium guianensis", "Inga alba", "Tachigali versicolor", "Brosimum utile", "Caryocar

I am using R (version 2.13.0; 2011-04-13). Platform: x86_64-pc-mingw32/x64 (64-bit). The messages that I see is “This application has requested the Runtime to terminate it in an unusual way. Please contact the application's support team for more information” I am using the following libraries: > library(package="gmodels") > library(package="gtools")

I am making a barplot using barplot2 from gplots where each bar represents a specific tree species. I have formatted the species names on the x-axis so that the genus name is above the species name and have then rotated the labels 45 degrees to save room. This is my code: >columncolor<-c("grey20", "grey20", "grey20", "grey70",

Hello, I've recently transitioned to using R in Linux. My OS/installation versions are: $ Red Hat Enterprise Linux AS release 4 (Nahant Update 6) $ Linux lx-chgmqsd05 2.6.9-67.0.1.ELsmp #1 SMP Fri Nov 30 11:57:43 EST 2007 x86_64 x86_64 x86_64 GNU/Linux I am trying to create a repository of packages under ~/R/library which I've created since I do not have admin access on my system. From my

Hello, I've recently transitioned to using R in Linux. My OS/installation versions are: $ Red Hat Enterprise Linux AS release 4 (Nahant Update 6) $ Linux lx-chgmqsd05 2.6.9-67.0.1.ELsmp #1 SMP Fri Nov 30 11:57:43 EST 2007 x86_64 x86_64 x86_64 GNU/Linux I am trying to create a repository of packages under ~/R/library which I've created since I do not have admin access on my system. From my

Hi R-users, I inted to make multiple plots using for loop. The question is how can I adjust the left hand side margin of the plot according to the names.arg argument in barplot2. In every plot I have different annotations in the y axis and they vary in length. Now when I have fixed margins opar <- par(mar=c(3,15,0,2)... I get the same margins in all of the plots. That leaves lots of white