similar to: problem of R CMD check

Dear listers, I was used to package pgirmess under Windows with everything OK, but, for the first time, I had a trial this afternoon on Ubuntu 7.10 gutsy (I have a double boot computer and work more and more under unix) and R 2.7.0. Everything went OK except this: sudo R CMD check pgirmess ..... * checking examples ... ERROR Running examples in 'pgirmess-Ex.R' failed. The error most

Good morning, we recently observed a problem with importing S3 generics from a foreign package (without namespace), defining a S3 method in a package _with_ namespace and the `cleanEx()' function which is automatically generated and executed before examples are run by R CMD check. To be more precise. Package `strucchange' defines a S3 generic sctest <- function(x, ...)

On a SUN 280R running Solaris 9... The configure and make steps completed without errors. But when I try to perform the make check step, I get the following: $ make check FORCE=FORCE `Makedeps' is up to date. running code in 'base-Ex.R' ...*** Error code 1 make: Fatal error: Command failed for target `base-Ex.Rout' Current working directory /usr/local/R-2.0.0/tests/Examples ***

Hi all, Today, i just installed the newest R version 2.10.1 and other necessary tools for building R package under windows,e.g. Rtools, perl. All are the newest version. After the correct configuration under windows (configuration should be correct), i use it to re-check my old package. I found the following prolem when checking EXAMPLEs in each function, which did not exist before this

Full_Name: Madeleine Yeh Version: 1.9.1 OS: AIX 5.2 Submission from: (NULL) (151.121.225.1) After compiling R-1.9.1 on AIX 5.2 using the IBM cc compiler, I ran the checks. One of them failed. Here is the output from running the check solo. root@svweb:/fsapps/test/build/R/1.9.1/R-1.9.1/tests/Examples: ># ../../bin/R --vanilla < stats-Ex.R R : Copyright 2004, The R

Hi all, I'm preparing a package which uses .Fortran to interface a Fortran 95 function. This F95 function simply receives the name of a file from R, opens this file and forwards its content to a F95 module, which, in turn, makes the real computation. The F95 module is a pre-existing one and I'm trying to use it in its actual state. Thus, data transfer between R and this F95 module is

Dear all, I have a serious problem to solve my model. I study over exploitation of fish in the bay of biscay (france). I know only the level of catch and the fishing effort (see data below) by year. My model is composed by the following equations: * the growth function Gt(St) = r*St*(1-St/sbar) with Gt the growth of each period t r intrinsec growth of the stock sbar carriyng capacity of the

Hi r-users, I would like to draw line plots. However, the plot starts from 11121 data and plot data ENTRY last in the plot. Here is the code and data. datn <- read.table(header=TRUE, text=' LEVEL STATUS CGPA DIPLOMA ENTRY 3.32 DIPLOMA 11121 2.91 DIPLOMA 11122 2.90 DIPLOMA 12131 2.89 DIPLOMA 12132 2.89 DIPLOMA 13141 2.93 DIPLOMA 13142 2.96 DIPLOMA 14151 2.76 DIPLOMA 14152 2.73 STPM

Hi folks, I'm attempting to compile and install 2.5.0, and "make check" is failing one of the earlier sanity tests. I'll append the relevant portion of the Rout.fail file below, but I've narrowed it down manually to a single command: > sessionInfo() R version 2.5.0 (2007-04-23) x86_64-unknown-linux-gnu locale:

Hi, Thanks for the reproducible example. Looking at str(datn) would give you a clue. STATUS is a factor because it contains character values. Factor levels by default are alphabetical with numbers first, but you can change those. > str(datn) 'data.frame': 36 obs. of 3 variables: $ LEVEL : Factor w/ 4 levels "DIPLOMA","MATRIC",..: 1 1 1 1 1 1 1 1 1 4 ... $

Hi, I have installed the necessary tools for making a R package under windows and am sure these tool have been correctly configured. I am very new to try writing a package, so the error may be very obvious for you. Forgive me if it is too easy. My package name is *stam*, and i put it under the folder "D:/StatSoft/R/MyPackage/". I have two folders,*R* and *man*. Besides, i also have

I'm having a very hard time making R CMD check produce a clean check on examples because of the timings inserted into examples by R CMD check. I am getting a difference on every example output caused by timing information being inserted by 'R CMD check'. The current 'Writing R Extensions' manual[1] states on p. 14: If directory tests has a subdirectory Examples

In R version 2.6.1 (2007-11-26) and R version 2.6.1 Patched (2008-01-19 r44061) on openSUSE 10.2 (X86-64) > gctorture() > proc.time() Error: protect(): protection stack overflow The problem with this is that then R CMD check --use-gct foo ALWAYS FAILS with > cat("Time elapsed: ", proc.time() - get("ptime", pos = 'CheckExEnv'),"\n") Error in

This SO post: https://stackoverflow.com/q/76583828 describes a strange R CMD check error. Depending on the contents of a comment in one of the examples sections of a help page, an error like this could be triggered: > base::assign(".dptime", (proc.time() - get(".ptime", pos = "CheckExEnv")), pos = "CheckExEnv") >

Hi, Does anyboody have insight into what this error terminating "R CMD check" on an in-house package may imply? > ### > cat("Time elapsed: ", proc.time() - get("ptime", pos = 'CheckExEnv'),"\n") Error in get("ptime", pos = "CheckExEnv") : unused argument(s) (pos = "CheckExEnv") Calls: cat -> cat.default

Am 02.07.23 um 18:01 schrieb Duncan Murdoch: > This SO post: https://stackoverflow.com/q/76583828 describes a strange R > CMD check error. Depending on the contents of a comment in one of the > examples sections of a help page, an error like this could be triggered: > > > base::assign(".dptime", (proc.time() - get(".ptime", pos = >

I am developping a package (pgirmess) that since long does not go through CRAN MacOSX checks, just because I have this command in one of the examples. text(mydata[,3],mydata[,4],paste(round(dirs,0),"?"),cex=0.7) It makes: <ERROR: re-encoding failure from encoding 'latin1'> text(mydata[,3],mydata[,4],paste(round(dirs,0),"+ + + + cleanEx() +

Example run and stack trace: wazor /s/src/stat/R-1.8.0/tests/Examples $ ../../bin/R --no-save < base-Ex.R R : Copyright 2003, The R Development Core Team Version 1.8.0 (2003-10-08) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a

Add the following to example section of a dot-Rd manpage: ## :WHY: The following kills R CMD check but runs fine on console. foos <- c("aaa", "bbb", "ccc") cat(sapply(foos, function(foo) { sprintf("name: %-18s upper: %s\n", foo, toupper(foo)) }), sep="") R CMD

Hello everybody, I am just trying to put together my first own CRAN-able package. I have completed the programming and my code works OK. But now when I perform R CMD check agsemisc_1.0-2.tar.gz and R gets to the step * checking examples ... I receive the following error message: > print(bwplot(Species~Sepal.Length, data=iris, panel=panel.bwstrip)) Error in rep(T, length(x)) : T used