Displaying 20 results from an estimated 2000 matches similar to: "Trouble loading package"
2013 Feb 27
3
positioning of R windows
I have 2 (related, I think) questions about positioning of windows within R.
1. I often work with a second monitor and sometimes like to arrange 1
or more plot windows on the second monitor, while keeping the console on the
primary monitor (so I can see things better). I used to be able to do this
(when using Windows XP), but it seems that now (using Windows 7) I can't
even move the
2006 May 02
1
Tests just deleted my production Database!!!
Sorry, in my haste I forgot to modify the subject.
5/2/06, "Christian R. Garner" <olus@digitalapathy.net>wrote:
>
> All assumptions aside, "rectest" and "salt" are usernames not
> databases/schemas according to the pasted config. If they were in fact
> different databases/schemas, this problem could never have happened.
> While
>
2010 Nov 08
1
RMark error: only 0's may be mixed with negative subscripts
Hi all,
I have just started using RMark to analyse capture-recapture data. I am
trying to analyse a simulated data set using the Robust Design (two primary
periods with three secondary sessions in each) to estimate apparent
survival. On specifying the time intervals (that tell R about the primary
and secondary sampling sessions), this is the error I get:
> time.int <- c(0,0,1,0,0)
>
2008 Jun 13
2
Quartile regression question
I have data that looks like
lake,loglength,logweight
1,2.369215857,1.929418926
1,2.426511261,2.230448921
1,2.434568904,2.298853076
1,2.437750563,2.298853076
1,2.442479769,2.230448921
1,2.445604203,2.356025857
...
102,2.722633923,3.310268367
102,2.781755375,3.502153893
102,2.836324116,3.683407299
102,2.802773725,3.583312152
102,2.790285164,3.546419267
102,2.806179974,3.599118565
2008 Oct 24
4
gfortran optimization problems
Colleagues,
I have a routine in package labdsv that calls a FORTRAN subroutine.
Recently, I was informed that it sometimes gives different results on a
PC and Mac, and that the PC version is clearly wrong. I tested it on
linux (because I don't have a PC), and I get the same (incorrect)
behavior as the PC.
Simply by inserting debug WRITE statements in the FORTRAN I would get
different,
2009 May 20
2
round function seems to produce maximum 2 decimals
I am trying to use round()to force R to display a specific number of
decimals, but it seems to display <=2 decimals no matter what I specify in
the digits argument. As an alternative I tried signif(), but it also
produces unexpected results. See example code and results below. Format()
works, but then the result no longer is numeric. Am I missing something
simple?
I am using R 2.9.0 on Windows
2008 Aug 22
2
Newbie programming help
All -
Not sure if this is a real programming question, but here goes:
I have data that looks like
Lake Length Weight
1 158 45
1 179 70
1 200 125
1 202 150
1 206 145
1 209 165
1 210 140
1 215 175
1 216 152
1 220 150
1 221 165
...
where lake goes from 1 - 84 and the number of rows for each lake is variable (but > ~20).
I'm trying to do two things: 1) build a simple linear model of the
2008 Jun 10
3
newbie nls question
I'm tyring to fit a relatively simple nls model to some data, but keep coming up against the same error (code follows):
Oto=nls(Otolith ~ Linf*(1-exp(-k(AGE-to))),
data = ages,
start = list(Linf=1000, k=0.1, to=0.1),
trace = TRUE)
The error message I keep getting is "Error in eval(expr, envir, enclos) : could not find function "k"". I've used this
2005 Nov 30
8
Solving Systems of Non-linear equations
I am trying to write a function that will solve a simple system of
nonlinear equations for the parameters that describe the beta
distribution (a,b) given the mean and variance.
mean = a/(a+b)
variance = (a*b)/(((a+b)^2) * (a+b+1))
Any help as to where to start would be welcome.
--
Scott Story
Graduate Student
MSU Ecology Department
319 Lewis Hall
Bozeman, Mt 59717
406.994.2670
sstory at
2008 Aug 19
1
Histogram binning
I am trying to produce frequencies in defined intervals however I can't seem
to figure out how to get R to bin my data the way I want it to.
I have several thousand lengths of fish that I want to be binned as follows:
Ex.
Length Bin
209 200
219 210
431 430
727 720
That is, bins with any length equal to or greater than the lower
2007 Jun 11
1
Rearranging Capture History Data in R
What code can i use to convert a table like this:
Tag# Date
1 1
2 1
3 1
4 1
2 2
4 2
1 3
2 3
4 4
Into one like this:
Tag 1 2 3 4 #Date header
1 1 0 0 1
2 1 1 1 0
3 1 0 0 0
4 1 1 0 1
Thanks,
Ben Cox
Research Assistant (M.S.)
Montana Cooperative
2010 Aug 23
2
Quantile Regression and Goodness of Fit
All -
Does anyone know if there is a method to calculate a goodness-of-fit
statistic for quantile regressions with package quantreg?
Specifically, I'm wondering if anyone has implemented the
goodness-of-fit process developed by Koenker and Machado (1999) for R?
Though I have used package quantreg in the past, I may have overlooked
this function, if it is included.
Citation:
Koenker, R. and
2005 Nov 09
6
elements in a matrix to a vector
hi all,
i'm trying to get elements in a matrix into a vector. i need a
"streamlined" way to do it as the way i'm doing it is not very
serviceable. an example is a 3x3 matrix like
0 0 3
2 0 0
0 4 0
to a vector like
3 2 4
thanks...mj
[[alternative HTML version deleted]]
2008 Dec 18
2
Contextstack overlow
All -
I have a number of rows that I am assigning length classes to via
l.class<-with(wae,
ifelse((Length>=120)&(Length<130),"125",
ifelse((Length>=130)&(Length<140),"135",
ifelse((Length>=140)&(Length<150),"145",
ifelse((Length>=150)&(Length<160),"155",
2008 Jun 12
2
Predicting from an nls model
I keep running up against the same error when I try to plot a line from a nls model. The data is fisheries length/weight data. Code follows:
require(graphics)
pow = nls(Weight~alpha*Length^beta, data=wae,
start=list(alpha=0.0000001, beta=3.0), trace=TRUE)
predict(pow)
plot(Weight~Length,
2008 Jul 03
1
lm() question
I have data that looks like
YC Age Num
82 11 2
83 10 0
84 9 8
85 8 21
86 7 49
87 6 18
88 5 79
89 4 28
90 3 273
91 2 175
with a program
mod1=lm(log(Num+1)~YC, data=box44)
plot(log(Num+1)~YC, data=box44, pch=19, xlab="Year Class",
ylab="Loge Number at age", ylim=c(0,6), xlim=c(91,82))
abline(lm(log(Num+1)~YC), col="blue", lwd=2)
summary(mod1)
I need to
2005 Jul 19
1
deriv - accessing numeric output listed under gradient attribute
Hi,
I am interested in using the numeric output from the "gradient" attribute of
deriv's output in subsequent analyses.
But, I have so far been unable to determine how to do so.
I will use the example from the deriv help to illustrate.
> ## function with defaulted arguments:
> (fx <- deriv(y ~ b0 + b1 * 2^(-x/th), c("b0", "b1", "th"),
2008 Sep 02
2
nls.control()
All -
I have data:
TL age
388 4
418 4
438 4
428 5
539 10
432 4
444 7
421 4
438 4
419 4
463 6
423 4
...
[truncated]
and I'm trying to fit a simple Von Bertalanffy growth curve with program:
#Creates a Von Bertalanffy growth model
VonB=nls(TL~Linf*(1-exp(-k*(age-t0))), data=box5.4,
start=list(Linf=1000, k=0.1, t0=0.1), trace=TRUE)
#Scatterplot of the data
plot(TL~age, data=box5.4,
2003 Feb 07
2
Data manipulation
I am interested in building a model with a subset of data from a column.
The first 6 lines of my data look like this:
QUAD YEAR SITE TREAT HERB TILL PLANT SEED Kweed
1 A4 2002 s 1 N N N N 55.00
2 A10 2002 s 1 N N N N 60.00
3 B2 2002 s 1 N N N N 35.00
4 C2 2002 s 1 N N N N 23.00
5 C9
2005 Nov 04
1
Stress in multidimensional scaling
Hello,
We are trying to find a function to compute "stress" in our
multidimensional scaling analysis of a dissimilarity matrix. We've used
"dist()" to create the matrix and "cmdscale()" for the scaling. In order
to determine the number of dimensions we would like to plot stress vs.
dimensions. However, we cannot find a pre-made command. It seems that
other