similar to: Creating pdfs using qplot in qqplot2

Hello all, I've been using the following qplot command: qplot(pixX,pixY, data=som, geom="tile", fill=rgb) + scale_fill_identity() + opts(aspect.ratio = .75) + facet_grid(unitX ~ unitY) Now I would like to convert it into the explicit ggplot grammar, so I can remove the extras: axes, labels, background, borders, facet labels, and extra white-space around the plot. (If anyone has

Hi, ggplot/qplot is great - it has really helped me do some nice things. However, simple boxplot of different columns/variables is a bit tricky, because of (i think) qplot's generic Y conditional on X input form. Se below. # Some data: a <- rnorm(100) b <- rnorm(100,1,2) c <- rnorm(100,2,0.5) # normal boxplot of a,b,c boxplot(a,b,c) # Looks good library(ggplot2) # loads qqplot2 #

Hello, this following code give a nice png: /library(ggplot2) i <- 1 png(file=paste('test ',i,'.png',sep='')) qplot(carat, data=diamonds, fill=color,geom='histogram')+scale_y_continuous(i) dev.off() / I would like to get more files, but the following code doesn't make any file: /library(ggplot2) for (i in 1:2) { png(file=paste('test

Hello all, I'm stuck with a strange issue with writing jpegs of plots to a folder in a loop. This works: for (step in 1:length(steps)) { jpeg(filename=paste("frame_",sprintf("%05d",step),".jpg",sep="")) plot(steps[[step]]) dev.off() } But if I use qplot to generate the plot (which is my aim): for (step in 1:length(steps)) {

HI am plotting different density plots in one graph each with a different color. And i want to add labels to plot mentioning which color belongs to which data series. p2 <- qplot(corArms, data = data1, geom = "density", adjust=0.4, main="Arms Correlation All") + layer(data=data2, geom="density", adjust=0.4, color=I(2)) + layer(data=data3,

Dear colleagues, i am carrying out an ordinal regression model. I try it on SPSS but I "flirt" with R as well. I have a few questions. 1. What is the most reliable/tested/trusted package for ordinal regression in the R world? 2. Also, I have a statistical question. What is the danger of having to many 'empty cells' in ordinal regression? How many empty cells are too many? Do

I get the following error when I run qplot() qplot(grade, read,data = hhm.long.m, geom = c("point", "smooth")) Error in smooth.construct.cr.smooth.spec(object, data, knots) : x has insufficient unique values to support 10 knots: reduce k. I am not sure how to tackle this problem. When I take a subsample (< 1000) than I am able to run that function but with my sample

Dear list, I wish to plot chromatin precipitation data: I would like to have a rectangles (x:end-start, y:peak) but I do not have an idea how to define x (in terms of qplot syntax) and to choose the correct geom. mydata is a subset of a larger file. > mydata chrom start end peak 1 chr11 5291000 5291926 8 2 chr11 10988025 10988526 7 3 chr11 11767950 11768676 8 4

Hi, I've run into a difficulty with qplot function (in the ggplot2 package). I can facet histograms even when the faceting variable contains missing values, but only so long as the faceting variable is not a factor. Example: y1 <- rnorm(10) x1 <- c(rep(1,5), rep(2,4), NA) x2 <- factor(c(rep(1,5), rep(2,4), NA)) library(ggplot2) qplot(y1, geom = "histogram", facets =

Dataframe closed contains balances of closed accounts: each row has month of closure (Date-type column month) and latest balance. I would like to plot by-month distributions of balances. A qplot call below produces several warnings and no output. Can anyone help? Thank you. PS. A really basic task, very similar to the examples on p. 71 of the ggplot2 book, apart from a Date grouping column; I

Dear list, I would like to apply my own colours to a stacked area plot, done with qplot, but I have not succeeded... What do I have so far (I am dealing with the development of cover of specific groups of plants): library(ggplot2) library(RODBC) channel <- odbcConnect("myusername", case="tolower") sql <- "select trial, cover_of, dateofsurvey, cover from

Hello, I am trying to plot means and standard errors conditioned by a factor, using qplot. I am successful at getting the bar graph I want with a error bar, however I have tried many things and cannot get the bars to change colors. Currently showing as red and blue, but need it to be black and white for publication. Any suggestions please? Using a data set June, which is str:

Hello, I am a new r-user, and after a great effort I have made this fantastic figure with qplot: qplot(ROI, CBF, fill=factor(Carrier), data=combinedboxplot_dataset_se_1_CBF, geom="boxplot", position="dodge",xlab=NULL,ylab=("CBF,white matter-normalized"),main=("Differences between carriers and non-carriers on baseline"))+theme_bw() Can anyone help me

I'd like to generate a boxplot that has BOTH the overall distribution of a continuous variable (say age), and then a boxplot for each level of a stratifying variable (e.g. site). Does anyone have prototype code for this? Thanks, -- View this message in context: http://www.nabble.com/GGPLOT-QPLOT-Boxplot-with-summary-tp20095591p20095591.html Sent from the R help mailing list archive at

Dear List, yes, me again trying to work with qplot ;-) I would like to make several single plots within a loop, like this (simplified and so on...): trials <- c("A","B","C") mycolours <- ("wheat","darkolivegreen","lightgreen",

Hi all, whenever I try to plot a histogram using qplot() function of "ggplot2" library, I get error like this : > qplot(rnorm(1000), geom="histogram", binwidth=0.2, main = "", xlab="", > ylab="") Error in scale[[1]] : subscript out of bounds However if I remove ylab="" argument, then it is working fine. Am I missing something?

I took some data from an online poll about which R GUI people used most and I am messing around with it to learn how to use qplot. Specifically I am making a horizontal bar graph and I have two questions. 1. The categories are ordered in rather strange way at least to me. It is not alphabetical or ascending/descending order of votes cast so i had to manually state the order I wanted which is

Hi, I've used the following command in qplot qplot(a$V1,geom="histogram",binwidth=0.15,fill = factor(a$V2),ylab="Frequency",xlab="Rate"); but the title in the legend shows up as factor(a$V2)...how can i change this? -- Rajesh.J [[alternative HTML version deleted]]

Hi. first things first ... thanks for ggplot2. Now my question. I'm using qplot to generate a plot as follows where X,Y,Z, A are columns in a dataframe. qplot(X, Y, data=XYDATA, color=Z, geom=c("point"), size=A) This works as expected. Factor A has three levels so there are three sizes of the point plot symbol. I understand that the factor levels are mapped to symbol sizes.

Hello I simply want to plot two variables against one 'year' variable in qplot. Is any way of doing this without reshaping data in long format and using facet function afterwards? Thank you Denis