similar to: estimation of parameters with grofit

Hi Is it possible to use grofit to get the AIC of several (e.g. two) growth models and compare both these and model parameters? All I can get it to do so far is return parameters for a single model. Cheers Roland [[alternative HTML version deleted]]

Hi, When modeling with negbin from the aod package, parameters for a given count y | lambda~Poisson(lambda) with lambda following a Gamma distribution Gamma(r, theta) are estimated. The intercept is called phi. Some other parameters may be also be estimated from factors in the data: the estimates returned for all these would be in accordance with the Value listing in the negbin entry in the aod

Dear All, I want to use grofit package for biological growth curves. My dataset only includes "age" variable and "size" variable. I want to use logistic, gompertz and richards growth curves to predict age from size. How can I implement this data set to the function in grofit package? Best regards, Deniz [[alternative HTML version deleted]]

Hello, I would like to ask about the statistic used for initial values for models built with grofit. Is the mean (of the experiments or cases) at t1 used? Also at the other time points? regards, Russell [[alternative HTML version deleted]]

Does anyone know if it is possible to get the length of the log phase (the main growth phase) from a grofit logistic model? I can get the lag phase length, maximum growth and max rate of growth, but I also want to know the length of the log phase (ie, for how long do the bacteria grow exponentially?) Thank you for any help in advance [[alternative HTML version deleted]]

Hello, I'm hoping someone may know the most likely R package for a multivariate population model for comparing groups? That is, I'd like to estimate a (stochastic) model for one batch of experiments against a different batch growing under different conditions. I'm a bit familiar with grofit, but also reading about dse and dlm. Following Bolker's Ch. 11 it seems there are many paths

--- On Mon, 3/12/12, aleksandr shfets <a_shfets at mail.ru> wrote: > From: aleksandr shfets <a_shfets at mail.ru> > Subject: Fwd: Re[2]: [R] B-spline/smooth.basis derivative matrices > To: "Vassily Shvets" <shv736 at yahoo.com> > Received: Monday, March 12, 2012, 5:15 PM > > > > -------- ???????????? ????????? > -------- > ?? ????:

Hello, I would like to submit two papers that use LLVM to the Related Publications section. Both papers focus on code isolation applied to perform piecewise compiler optimizations. The code isolation process is performed by CERE, an open source tool based on LLVM. The second paper is an extended version of the first one. 1) Piecewise Holistic Autotuning of Compiler and Runtime Parameters

Dear Mihail, I've added these two publications to the publications page. Please review it and let me know if I need to make any changes. In particular, if you have URLs to use for the papers, having those would be greatly appreciated. Regards, John Criswell On 11/28/17 12:05 PM, Mihail Popov via llvm-dev wrote: > > Hello, > > I would like to submit two papers that use LLVM

To whom it may concern, 1. I would like to know if there is a command in R to choose a function for a given dataset. I am facing a difficult question about how to fit the data [ please attachment ] 2. Are there any function that will allow users to do the piecewise regression? If not, is it going to be provide in the new updated version? What I am using is the piecewise logistic regression,

Dear all, I'm attempting to use a piecewise regression to model the trajectory of reproductive traits with age in a longitudinal data set using a mixed model framework. The aim is to find three slopes and two points- the slope from low performance in early age to a point of high performance in middle age, the slope (may be 0) of the plateau from the start of high performance to the

I am a novice R user. I would like to be able to graph some simple piecewise functions/functions with domain restrictions in R, but I'm having trouble defining such functions. For example, I would like to define the following function: f(x)={x^2 if -1<x<x; 1 if 2<x<3} Notably, the function is undefined outside of domain (-1,1)U(2,3). My best attempt in R is something like

Hello, I'd like to say that it's clear when an independent variable can be ruled out generally speaking; on the other hand in R's AIC with bbmle, if one finds a better AIC value for a model without the given independent variable, versus the same model with, can we say that the independent variable is not likely to be significant(in the ordinary sense!)? That is, having made a lot of

I am looking into fitting a so-called double von Bertalanffy function to fish length-at-age data. Attempting to simplify the situation, the model looks like this ... Y ~ f(X; a,b,c) if x < Z Y ~ g(X; a,d,e) if x >= Z where * f and g are non-linear functions (the "traditional" "single" von Bertalanffy growth function), * Y (length) and X (age) are observed variables,

Hi, I am a biologist (relatively new to R) analyzing data which we predict to fit a power function. I was wondering if anyone knew a way to model piecewise functions in R, where across a range of values (0-x) the data is modeled as a power function, and across another range (x-inf) it is a linear function. This would be predicted by one of our hypotheses, and we would like to find the AICs

Dear list, Hi, I am trying to get the second derivative of a logistic formula, in R summary the model is given as : ### >$nls >Nonlinear regression model >model: data ~ logistic(time, A, mu, lambda, addpar) >data: parent.frame() > A mu lambda >0.53243 0.03741 6.94296 ### but I know the formula used is #

Dear all, I am just wondering if anybody has implemented a function that can give a piecewise linear interpolation in more than 2 dimensions? I have looked at the akima package, but I would rather like a piecewise linear interpolation rather than a spline and while it did the job quite satisfactory for 2 dimensions, I need to interpolate in at least three dimensions. If anybody has implemented

Which function implements the piecewise cubic Hermite interpolation? I am looking for equivalent of matlab's interp1 with the method = 'pchip' Here is the reference http://www.mathworks.com/access/helpdesk/help/techdoc/index.html?/access/helpdesk/help/techdoc/ref/interp1.html& -- View this message in context:

Hi All, I am trying to fit a piecewise lasso regression, but package Segmented does not work with Lars objects. Does any know of any package or implementation of piecewise lasso regression? Thanks, Lucas

Dear Forum, I have been wracking my head over this problem for the past few days. I have a dataset of (x,y). I have been able to obtain a nonlinear regression line using nls. However, we would like to do some statistical analysis. I would like to obtain a confidence interval for the curve. We thought we could divide up the curve into piecewise linear regressions and compute CIs from those