similar to: barplot with a probability density curve

Dear all, I am using gnome-terminal to run R, and I noticed that standard PageUp/Down do not work but they do work for other programs within the same terminal window (e.g. irssi). Scroll bar does not work either. I run R using GNU-screen, but it doesn't seem to make any difference. Many thanks Olga ------------------ R version 2.11.1 (2010-05-31) 2010 x86_64 GNU/Linux Ubuntu 10.04.1 LTS

Dear all, mydata<-data.frame(x1=c(1,4,6),x2=c(3,1,2),x3=c(2,1,3)) cor(mydata) x1 x2 x3 x1 1.0000000 -0.5960396 0.3973597 x2 -0.5960396 1.0000000 0.5000000 x3 0.3973597 0.5000000 1.0000000 I wonder if it is possible to fill only lower triangle of this correlation matrix? Using 'dist' doesn't seem to be useful as it doesnt allow to convert this table

Dear all, I am trying to import data with read.csv and my file is on remote machine. I believe that I need to open a connection, not sure about syntax though. I would appreciate any suggestions, Thanks! Olga

Dear all, I am using GNU screen to run multiple R sessions from one working directory in order to split task, however I noticed that dataset is not synchronized e.g. if I have two sessions R1 and R2, and I remove an object from R1, R2 doesn't change as expected or change at random. I have tried to save.image(), q() and then restart both sessions, but it does not help. Any suggestions?

Dear all, Using: library(vegan) data(BCI) mod <- radfit(BCI[1,]) mod RAD models, family poisson No. of species 93, total abundance 448 par1 par2 par3 Deviance AIC BIC Null 39.5261 315.4362 315.4362 Preemption 0.042797 21.8939 299.8041 302.3367 Lognormal 1.0687 1.0186 25.1528 305.0629 310.1281

Dear all, I have a dataframe: df<-dataframe(a=c(1,2,3),b=c(4,5,6),c=c(7,8,9),d=c(10,11,12)) I want to obtain a new dataframe with columns a and b being standardized ((x-mean(x))/sd(x)); the other two columns (c,d) I want to leave unchanged. What is the best way to achieve this? I have been trying to use subscripts but did not succeed so far. Any tips? Many thanks, Olga

Dear all, I was wondering if there is a way to explore a syntax of particular function without package installation? I am trying to write my own functions, and I would like to see how other people approached similar problems. If every time I have to install/load package to be able to explore function syntax I end up installing loads of packages I am never going to use. I have also tried

I''m using standard barplot (Windows version 1.6.2 of R) to represent a certain weekly metric "v" and I would like to properly overlay on top of it its moving average "mean.8" (window of 8 weeks). I must be doing something wrong since the moving average (using "lines") doesn''t overlay properly, i.e., both x-scales do not match! ...

Dear R People: I have a barplot created from a table. What is the best way to set up the barplot such that is shows probability rather totals, please? I've tried plot also but it shows horizontal bars rather than vertical bars. Thanks, Erin -- Erin Hodgess Associate Professor Department of Computer and Mathematical Sciences University of Houston - Downtown mailto: erinm.hodgess at

Hi I am using barplot() to draw some barplots, with a matrix as the data so that multiple bars are drawn for each data point. I want to use the argument "beside=TRUE" to juxtapose the bars instead of stacking them. If I execute: barplot(data,names.arg=names,density=c(20,10),beside=FALSE) I get the expected behaviour i.e. the bottom part of the column is shaded 20 lines per inch, the

Hello My dataset is as follows: jobno recruits 1100 18 1200 1 1850 5 2100 190 2789 25 3000 1 . . . . the dataset has 130 rows I want to plot barplot from left side and cumulative curve from right side in one graph itself using layers in ggplot2. I sorted the recruits 1st in decreasing order

Hello, I want to draw 3D cylinder objects in R. Given is the length and the diameter of the cylinder. Has anybody an example? Thank you very much! Best regards -- ---------------------- Dr. Hans-Joachim Klemmt Forstoberrat Organisationsprogrammierer IHK Bayerische Landesanstalt f?r Wald und Forstwirtschaft zugewiesen an Lehrstuhl f?r Waldwachstumskunde Technische Universit?t M?nchen

Am I wrong that barplot is supposed to just skip NAs, and continue with the rest of the data in a matrix column? That's how I read various posts on the subject. But that's not what happens for me with R64.app (on a Mac, obviously). For example: d0 <- as.matrix(c(2,3,4)) d1 <- as.matrix(c(2,3,NA)) d2 <- as.matrix(c(2,NA,4)) d3 <- as.matrix(c(NA,3,4)) barplot(d0) barplot(d1)

I need to increase the width of the border in a barplot, i checked both barplot, and barplot2, but cant find how to do it. how can I do? thank you john [[alternative HTML version deleted]]

I'm trying to create a barplot that has two sets of data next to each other. I'm using barplot with the add=TRUE option, but this simply adds the second dataset on top of the first, obscuring it. How do I add the new data to the right on the existing barplot so that both sets are visible? I've been playing with all sorts of option and reading the list archives with no

Dear all, I am trying to make barplot from matrix with "beside=FALSE". I have 165 labels in my bar plot. When i plot the label horizontally below the barplot, then all labels are not appear in the plot due to lack of space. I used the following function: barplot(t(bar), main="Barplot based on LCMS", ylab="RF membership Probability",   

All, Consider: BagA <- c(-1000,10,10,10,10,10,10, 10,20,20,20,20,20,20,30, 30,40,40,50,60) BagB <- c(10,20,30,30,40,40,50,50, 50,50,50,50,60,60,60,60, 60,60,60,1000) layout(c(2,1)) barplot(table(BagB)) barplot(table(BagA)) At this point, I'd like to arrange the plots so that the 10-bars are aligned, the 20-bars are aligned, etc. So, I started

Subject: Creating a barplot--advice needed > Advice needed: I am preparing a computer program to do a barchart. Advice > needed: Should I learn the lattice package, or try to? As a > non-statistician, much of the terminology is unfamiliar to me. "grouping > variable," "object of class trellis," etc. Or, is there a more easily > learned way to do it? It is a

Hello everyone, i am currently creating a barplot. This barplot takes a vector of ~200 datapoints. Each datapoint represents one bar. http://img96.imageshack.us/i/human1w.png/ (Ok as you see, it is not only one barplot, but a series of barplots). Now, these barplots represent a human chromosome. This means they are ordered. For instance bar number 50, means position 50 in the human chromosome.

I am trying to make a barplot with a broken axis using gap.barplot (in the indispensable plotrix package). This works well when the data is a vector: > twogrp<-c(rnorm(10)+4,rnorm(10)+20) > gap.barplot(twogrp,gap=c(8,16),xlab="Index",ytics=c(3,6,17,20),ylab="Group values",main="Barplot with gap") But when the data is an array (for a bar plot with multiple