similar to: Removing Zeros from matrix

Hey, Thanks for your great inputs. While "index = apply(mat == 0, MARGIN = 1, any)" gives you an idea of the rows containing zero(s), "index<-data[!apply(data==0,MARGIN=1,any),]" does the actual job of removing the rows with zeros. Kind regards Ogbos On 9 March 2010 15:12, Paul Hiemstra <p.hiemstra@geo.uu.nl> wrote: > Dimitris Rizopoulos wrote: > >>

Hi, I am a Ph.D. student from Québec, Canada. I’m a beginner with R and Bioconductor. Until now the only experience I have is in analyzing microarray data using affy and limma packages. Now I am trying to analyze Rat Gene 10 st arrays and I would like to run RMA analysis and Smyth moderated t test on those arrays. Since no cdf official package is available for those arrays, after reading many

Dear List, Let's say I have a list whose components are 2 matrices (as exemplified in the "mylist" object below). I'd like to create a list with components being 4 matrices based on an logical index vector. is there a way to simplify what I'm doing to obtain the results in "mylist2"? I'd like something that would work on an arbitrary number of elements in

Hi everyone, I have 2 environments (2 different R sessions) as described below: Session 1: Name of the environment: "CrlmmInfo" Objects in the environment: index1: logical index - length 238304 index2: logical index - length 238304 priors: list of 4 - (matrix 6x6, 2 vectors of length 6, vector of length 2) - all num params: list of 4: centers [238304 x 3 x

Hi everyone, I have 2 environments (2 different R sessions) as described below: Session 1: Name of the environment: "CrlmmInfo" Objects in the environment: index1: logical index - length 238304 index2: logical index - length 238304 priors: list of 4 - (matrix 6x6, 2 vectors of length 6, vector of length 2) - all num params: list of 4: centers [238304 x 3 x

Inline. Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things into it." -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip ) On Wed, Oct 14, 2020 at 3:23 PM 1/k^c <kchamberln at gmail.com> wrote: Is which() invoking c-level code by chance, making it slightly faster > on average? > You do not need

Dear list, I'm trying to concatenate the values of two columns but im not able to do it: i have a dataframe with the following two columns: X VAR1 VAR2 1 2 2 1 3 2 4 3 5 4 6 4 what i would like to

Dear All, I have a script that draws longitude and latitude of lightning occurrence. This script was running fine before. But when I changed my system and do a fresh install on another laptop, this error persist. source("script") Error in eval(expr, envir, enclos) : could not find function "pointsToRaster" I have tried to see if there is any other package I need to install

Hello, I am runing linux on Ubuntus. I find it difficult to install R packages. I am in South Africa. It always asked me to choose the nearest CRAN mirror. I normally choose South Africa and once I clicked Ok, the error message pasted below will appear. Please I am a new student of R and Ubuntus. The other warning "argument 'lib' is missing: using

Dear all, I am trying to add error bars on a boxplot but have encountered an error as indicated below. Is there a package I need to install or a library I have to load before this goes please. Thanks for any idea. Ogbos x<-replicate(20,rnorm(50)) boxplot(x,notch=TRUE,main="Notched boxplot with error bars") error.bars(x,add=TRUE) Error: could not find function "error.bars"

Good day to you all, I have lightning data containing date, time, latitude and longitude. I hope that distribution of latitude and longitude will give number of lightning occurrence in a region. I have used factor function to sum up the number of events on latitude and longitude axis and saved as x and y. But when I tried to plot the two, I had and error message ( Error in image.default(x, y, z) :

Hello, Please I am a learner. My operating system is ubuntus and I am trying to install raster package from R-forge site. I entered sudo apt-get install r-base-dev on the command line and that worked fine. I then typed R at the command line so as to run R. Inside R, I typed > install.packages("raster",repos="http://R-Forge.R-project.org<http://r-forge.r-project.org/>")

Hi All, I have a whole lot of *.raw files in my working folder and I am doing the same analysis on each of those and want to save all the results in a single file. I am making some mistake here and can't figure out how to solve it. Say, the *.raw files are ABCD.raw, EFGH.raw, IJKL.raw ... The files are of this format ID PHI?? aa1? aa2? aa3 .... 1??? 1???? 1.3?? 2.0?? 1.0 2??? 0????

Is the phrase "index <- match(x, sort(unique(x)))" reliable, in the sense that it will never return NA? Context: Calculation of survival curves involves the concept of unique death times. I've had reported cases in the past where survfit failed, and it was due to the fact that two "differ by machine precision" values would sometimes match and sometimes not,

Dear Rui, Thanks again for resolving this. I have already started using the version that works for me. But to clarify the second part, please let me paste the what I did and the error message: > set.seed(2024) > data <- data.frame( + Date = sample(seq(Sys.Date() - 5, Sys.Date(), by = "1 days"), 100L, + TRUE), + count = sample(10L, 100L, TRUE) + ) > > # coerce

Greetings to you all. I have two datasets - Time and magnitude. For a particular location, the magnitude of the parameter varies with time. I wish to obtain a polar coordinate distribution of time (0-24h) and magnitudes so as to visualize how magnitude varies with different times of the day (e.g., morning, midnight hours). I have searched for "polar coordinates in R" but could not get

Dear List, I am trying to label a plot with the symbol +/- sigma. Using something like - expression (2*sigma) gives me the symbol 2ó. However, adding +/- to it beats me. The code I am using is: plot(x,y,type="l",main=" expression(paste("±", plain(2*ó)),sep=""). Any suggestion will be appreciated. Best Ogbos [[alternative HTML version deleted]]

Dear Members, Compliments of the Season!! Below is a part of a code I use for Fourier analysis of signals. The code handles data with the format 05 01 01 8628 (year, month, day and count) 05 01 02 8589 (year, month, day and count) The sample data is attached as 2005daily.txt. I would like to adapt the code to handle data of the form: 05 01 01 00 4009

Hi, I am learning how to do principal component analysis in R. However, since I am family with only a few built-in functions like prcomp, sd, cor, I started manually with examples in text books while trying to use the few functions I know to manipulate what they have in the text. From the example in the text I obtained a data set. Using cor and cov, I calculated the correlation and covariance of

Dear All, I have just installed a new version of R (Version R-2.11.0) and did install other packages such as raster with ease. However, I could not start the plotting device x11(). I remembered that somewhere at the stage of installation, an error occurred : 'configure: error: --with-x=yes (default) and X11 headers/libs are not available' I tried avoiding this error by using ./configure