similar to: capturing errors in Sweave

Hi, I have an application in perl that prints some output to either stderr or stdout. Here's an example: # tmp.pl print STDERR "starting iterator\n"; for(my $i = 0; $i < 1000000; $i++) { print $i . "\n"; } # tmp.R con <- pipe("perl tmp.pl") r <- readLines(con, n = -1) close(con) However, the second line stalls until the perl for-loop finishes.

Hi, I'm wondering if someone has solved the problem of converting very large integers to hex. I know about format.hexmode and as.hexmode, but these rely on integers. The numbers I'm working with are overflowing and losing precision. Here's an example: x <- "6595137340052185552" # stored as character as.integer(x) # warning about inaccurate conversion

Hello All, I am instrumenting IR to pass addres of the function to runtime but I am getting error - Instruction does not dominate all uses. I used M.dump() to get below dump, not able to figure out what I am doing wrong. Any help would be much appreciated. define dso_local double @mysqrt(double %val1) local_unnamed_addr #0 { entry: %0 = bitcast double (double)* @mysqrt to i8* %1 = call

I just noticed the following in update.formula and I'm wondering if this behavior is the intention of the developers. Here's an example: update(`a: b` ~ x, ~ . + y) Note now that the response has no backticks and is interpreted as a:b (i.e. ":" is now an operator). This is because in update.formula the call to terms.formula uses simplify = TRUE. I'm working with data that

Hi, all, I just recently upgraded my computer though I'm using the same OS (XP). But now I'm having difficulty building packages and I cannot seem to solve the problem. I'm using R-2.1.1pat on Windows XP. Here is what I tried: D:\Users\sundard\slib\sundar\R>R CMD CHECK sundar * checking for working latex ... OK * using log directory

>From: Sundar Dorai-Raj <sundar.dorai-raj at PDF.COM> >Reply-To: sundar.dorai-raj at PDF.COM >To: Zhen Pang <nusbj at hotmail.com> >CC: r-help at stat.math.ethz.ch >Subject: Vectorising and loop (was Re: [R] optim "a log-likelihood >function") >Date: Wed, 29 Sep 2004 18:21:17 -0700 > > > >Zhen Pang wrote: > >> >>I also use

I've just encountered a segfault when using DierckxSpline::percur function. Below is the minimal example which triggers the error: --- library(DierckxSpline) x <- 1:10 y <- rep(0, 10) pspline <- percur(x, y) --- *** caught segfault *** address (nil), cause 'memory not mapped' Traceback: 1: .Fortran("percur", iopt = as.integer(iopt), m = as.integer(m), x =

Hi,I would like add a horizontal line at 126 (col=red) and a vertical line at 6.5 ( col= blue) in each panel .How should I use the panel.abline function in the following code I am using: ------------------ library(lattice) with(reg.dat.5,coplot(lbxglu~lbxgh|eth,panel=panel.smooth,xlab="ABC", ylab="FBG")) ---------------------------------------- Thanks a lot. Professor of

Hello, All: Jonathan Baron is "giving up" maintaining the RSiteSearch database. This breaks three things: (1) The R Site Search web service that Baron has maintained. (2) The RSiteSearch function in the utils package. (3) The sos package, for which I'm the maintainer and lead author. Might someone else be willing to take these over? For me,

I'm new to lattice and can't figure out what the problem is with the following example: ######################### > library(lattice) Loading required package: grid Attaching package `lattice': The following object(s) are masked _by_ .GlobalEnv : xyplot The following object(s) are masked from package:base : levels > test.data <- data.frame(x=rnorm(100), +

Full_Name: Sundar Dorai-Raj Version: 2.8.0 OS: Windows Submission from: (NULL) (76.220.41.126) The following code crashes R: library(tcltk) tt <- tktoplevel() tc <- tkcanvas(tt, yscrollcommand = function(...) tkset(ts, ...)) > sessionInfo() R version 2.8.0 (2008-10-20) i386-pc-mingw32 locale: LC_COLLATE=English_United States.1252;LC_CTYPE=English_United

Hi, all, I'm looking a utility for removing a directory from within R. Currently, I'm using: foo <- function(...) { mydir <- tempdir() dir.create(mydir, showWarnings = FALSE, recursive = TRUE) on.exit(system(sprintf("rm -rf %s", mydir))) ## do some stuff in "mydir" invisible() } However, this is assumes "rm" is available. I know of

Hi all, Here's a curosity I ran into since upgrading to 1.6.2 (precompiled for Windows). When using the chm help I get the following warning. I saw a recent post regarding this as a new warning (``dyn.load warning message in R1.6.2 on Windows XP'' dated 1/28/03), but not in the context of the help system. The warning only appears once and does not prevent the chm file from

Hi all, Say I have a matrix A with dimension m x 2 and matrix B with dimension n x 2. I would like to find the row in A that is closest to the each row in B. Here's an example (using a loop): set.seed(1) A <- matrix(runif(12), 6, 2) # 6 x 2 B <- matrix(runif(6), 3, 2) # 3 x 2 m <- vector("numeric", nrow(B)) for(j in 1:nrow(B)) { d <- (A[, 1] - B[j, 1])^2 + (A[,

Hi, All, I'm writing a wrapper for stop that produces a popup window using tcltk. Something like: error <- function(...) { msg <- paste(..., sep = "") if(!length(msg)) msg <- "" if(require(tcltk, quiet = TRUE)) { tt <- tktoplevel() tkwm.title(tt, "Error") tkmsg <- tktext(tt, bg = "white") tkinsert(tkmsg,

Hi, all, I just recently noticed a change in terms.formula from 2.2.1 to 2.3.1 (possibly 2.3.0, but I didn't check). Here's the problem: ## 2.2.1 > update(~ x | y, z ~ .) z ~ x | y ## 2.3.1 > update(~ x | y, z ~ .) z ~ (x | y) and in the NEWS for 2.3.1 o terms.formula needed to add parentheses to formulae with terms containing '|'. (PR#8462) So, there must be

Hi, R-help, (sessionInfo at the end) I'm trying to construct a function using bquote and running into a strange error message. As an example, what I would like to do is this: z <- 2 eval(bquote(function(x, y) { x^.(z) + y }))(2, 3) However, I get the following: Error in eval(expr, envir, enclos) : invalid formal argument list for "function" However, if I change the

Hi all, I have a question that I don't have a good answer for (note the word "good"; I have an answer, but I consider it not "good"). Take the following data in a single tab-delimited text file: <text> A Labels Value SE 2.5% 97.5% R90 0.231787 1.148044 0.035074 1.531779 R0 0.500861 0.604406 0.185336 1.353552 B Labels Value SE 2.5% 97.5% (Intercept) 1.367514

RenE J.V. Bertin wrote: > Hello, and (somewhat belated) best wishes for 2005. > > Can one order not to draw outliers in bwplot, or at least exclude them from the vertical axis scaling? If so, how (or what doc do I need to consult)? > The options that have this effect in boxplot() do not appear to have any effect with bwplot (although outline=FALSE in boxplot does *not* change the

Hi All: This follows my earlier post on webized slides on lecture presentation on introducing R. I learned that in Mozilla (Firefox) browsers, the slides did not show up. Sorry for the no show. As a reluctant windows user, I kind of carelessly clicked through Powerpoint to convert the presentation file to its html form, unwittingly leading to the mess. See if it got corrected now (I do not have