similar to: Different fonts on the same axis

I have a plotted a stacked panel graph (single x axis and multiple y axis) using the package zoo and would like to add a title for each separate panel. I am using the script: z <- with(mydata,zoo(cbind(mydata$Water.level,mydata$Submerged.plants, mydata$Crayfish.CPUE,mydata$Carp.CPUE),Year)) plot(z,type="b",pch=16,lty=2,xlab="Year",ylab=c("Metres","Realtive

Dear all, I am encountering some issues with my data and need some help. I am trying to run glm analysis with a presence/absence variable as response variable and several explanatory variable (time, location, presence/absence data, abundance data). First I tried to use the glm() function, however I was having 2 warnings concerning glm.fit () : # 1: glm.fit: algorithm did not converge # 2:

I'm having problems creating an axis label for a plot. y_label = expression(paste(plain('CPUE '),plain('(fish'),plain('x'),plain('h'^{-1}),plain(')'))) I'd like to replace the "x" with an interpunct symbol (dot). Any suggestions how to do this? Thanks in advance. [[alternative HTML version deleted]]

Hello all! I have a data frame with nine variables and 293 cases. (attached goes the csv file). I need to calculate a index using the sum of one variable (N) divided by the length of other variable (Fisherman), but for each day (Date). I tried to use that codes: by (cpue, cpue$Date, function (x) sum (cpue$N)/length(cpue$Fisherman)) tapply (cpue$Data, cpue$Data, function (x) {sum

Dear Sir/Madam, I am encountering one of those alien computer momements one finds every so often in life. See the sequence below: > fish3.fis <-read.csv("emperor2.csv", check.names = TRUE, strip.white = TRUE) > colnames(fish3.fis) [1] "Month" "Year" "FishingArea" "SumOfTotalCatch" "CPUE" [6]

I wish place the following axis label in such a manner that some of the text is plain and the scientific name is in italics (i.e. a mixture of two font types) Using plot: mtext("Total Landings of Pecten maximus (tonnes)",font,=3, side=2, line=3) makes everything italic, but how do I apply the font change to only "Pecten maximus"? Rgds Phil

I'm having trouble with some catch per unit effort data (CPUE, fisheries data). Some of the samples were "retained" and some "unretained," and they are entered as 2 separate entries for the same sampling event (Date and time). I want to calculate the total CPUE (so sum the "retained" and "unretained" number for each sampling event) and am having troubld

Dear list, I am new with ggplot2 and I have spend quiet some time putting together the following code to create the attached plot. However there's still a few things that I'm having trouble with! I would be grateful if someone can tell me how to fix (1) the colour of my bars into grey scales (2) removing the y-axis (species name) on the right figure to avoid duplication, and (3) fix the

Hi R users, I have a dataset with multiple variables and i'm trying to weigh average depths for fish species per year by their abundance (CPUE. I have tried the weighted.mean function but as i have two columns for the x value the lenghts differ with the w (CPUE). How do I solve this problem? So far I have tried this: data<-by(allspecies, list(allspecies$Depth, allspecies$Year),

Hi- I'm wrestling with some of my data apparently not being called into a GLM or an LM. I'm looking at factors affecting fish annual catch rates (ie. CPUE) over 30 years. Two of the factors I'm using are sea surface temperature and sea surface temperature anomaly. A small sample of my data is below: CPUE Year Vessel_ID Base_Port Boat_Lgth Planing SST Anomaly 0.127

Hi everyone, I have a problem with running a glm using a subset of my data. Whenever I choose a subset, in the summary the factors arent shown (as if the variable was a continuous variable). If I dont use subsets then all the factors are shown. I have copied the output from summary for both cases. Thanks for the help, Muri > model<-glm(log(cpue)~year,family=gaussian) Call: glm(formula =

Dear list, I making some box-and-whisker plots in R with vertebrate data. The x axis are species names that must be in italics. I tried with the "axis" function but no luck, and it seems that affects both axes. Any tip? Thanks a lot in Advance. Alej

Hello useRs, I'm trying to put italics and regular font into a title and am having some trouble. The title I would like is " /Q. marilandica/ Volume ". If I use main=bquote(italic( "Q. marilandica ", " volume")) I get just " Q. marilandica " in italics in the title. If i use main=bquote(italic( "Q. marilandica ,) volume") I get "

Whatever I want to do with wine is displayed with a very small font in italics. I need a magnifying glass to read any text. How can I change this for larger font and normal text? John

Dear all, I'm trying to create a list of point patterns ppp.object {spatstat} in a loop. My dataset looks like this: > names(OT1);head(OT1);dim(OT1) [1] "EID" "latitude" "longitude" "month" "year" "CPUE" "TSUM" [8] "fTSUM" EID latitude longitude

Hola, Vaya desastre al mandar la cabecera de la base de datos. Al enviarlo, se veía bien, pero está visto que por el camino la cosa se torció. Siguiendo el consejo de Javier, he subido un pequeño fragmento al DropBox. He quitado algunas especies para no hacerlo muy largo. Espero que ésta vez no haya problemas. https://www.dropbox.com/s/q7zla50oq7owg8k/CPUE.csv?dl=0 Un saludo y gracias Juan

Hi, I am graphing with the following command in the Lattice and LatticeExtra package xyplot(xts,lty=c(1,2),col=c("blue","red"),type=c("l","g"),par.settings = list(layout.heights = list(panel = c(2, 2))), aspect="xy",xlab="",ylab="%", key=key1,screen=list(a,a,b,b,c,c,d,d), layout=c(2,2),

Hi -I'm running a GAM with 7 explanatory variables with a Poisson error structure. All of the variables are continuous so I'm getting error messages in R. cod.fall.full.gam.model<-gam(Kept.CPUE~s(HOUR)+s(LAT_dec)+s(LONG_dec)+s(meantemp_C)+s(meandepth_fa)+s(change_depth)+s(seds), data=cod.fall.version2,family=poisson) In dpois(y, mu, log = TRUE) ... : non-integer x = 5.325517

Hi, I'm trying to get the correct font used when generating italic text in an R grahic. I have a set of labels that print correctly except it seems the italic text is justr a slanted version of the TeX computer modern normal font... I'm using R v1.8.1 on Windows XP, and I get the same result if I build the pdf using Adobe Acrobat or using MikTeX The labels:

Following on from my previous mail! plot(1:10,1:10) mtext("title", side=3, adj=0, font=3, cex=1.5) This works as expected and puts the font in italics. tag <- "A)" suffix <- "genea::" plot(1:10,1:10) mtext(bquote(.(tag) ~ Delta * .(suffix)), side=3, adj=0, font=3, cex=1.5) Here, the font isn't in italics, it's normal. I presume this is some