similar to: contour() & contourLines()

Hello I'm trying to calculate 2d confindence bounds into a scatterplot using the function "kde2d" (package MASS) and a contour plot. I found a similar post providing a solution - unfortunatly I do not realy understand which data I have to use to calculated the named "quantile": Post URL: http://tolstoy.newcastle.edu.au/R/help/03b/5384.html > (...) > >> Is

I am using contour to draw contour lines onto a photo (jpeg) of a leaf on a white background. I have two problems: 1) The contour gets plotted at right angles to the jpeg image. I guess this is a problem of referencing the start and end points of the image matrix but I can't see how to over come this other than loading in a second image that has been rotated 90 degrees and plotting the

A follow-up to my previous query. Say one of the results returned by contourLines() is C.W <- contourLines(....) Then C.W is a list of (in this case 28) lists, each of which is a list with components $level (a single number), $x (the x coords of the points on a contour at that level) and $y (the y coords). I can of course get these individually with, for the 5th one for instance,

Greetings all! I'm wanting to plot contours of a function, and I don't want to evaluate it at a dense grid of points (i.e. I don't want a huge array of values). Say I have a vector of x-values such as x <- 0.1*c(1:10), and the same for y <- 0.1*(0:10). I then evaluate a 10*10 matrix z of values of z = f(x,y). so I can then do CL <- contourLines(x,y,z) and get a list of

Hello everybody, I search a function which returns the contour of map with levels like contourLines, but I would like this function return the border of the map too, because the function contourLines cannot consider the corner of the map and it is not adapted to fill polygon after that. Thanks in advance Pierre Bruyer

I'm trying to make a set of contour plots of bivariate kernel density estimates, showing three such plots overlaid, similar to this plot http://euclid.psych.yorku.ca/SCS/Private/Test/ridge-boot2.pdf except that I would like to have the contours *filled* (using transparent colors). To make this reproducible, I've saved the results of KernSmooth::bkde2D() in the following file:

I want to use contourLines() to get contour line coordinate vectors, but I don't want to make a plot. However contourLines() insists on opening a graphics device. Is there a way tell it not to do this? > version platform i686-pc-linux-gnu arch i686 os linux-gnu system i686, linux-gnu status Patched major 2 minor 1.0 year 2005 month 04 day 20 language R

Dear all, I wonder about what could actually be possible with the function "contour": 1/ - the definition of contour lines is most often meaningless when the contours are drawn in areas where no real data points exist. It can however happen that irregular distributions lead to more or less irregular clouds of data points. Interpolations (eg: loess regression, GLM, etc...) are however

{ I think this message got rejected at the 1st attempt - trying again} R 2.15.1 , windows XP I have a very non-stationary bivariate time-series - say {xt,yt} t=1 ... lots. I want to do a bivariate density contour-plot of the whole series and then step through the series 1 second at a time plotting that second's {x,y} subset on top of the contour plot and losing the previous

Hello List! I asked this before (with no solution), but maybe this time... I'm trying to project a surface to the XY under a 3d cloud using lattice. I can project contour lines following the code for fig 13.7 in Deepayan Sarkar's "Lattice, Multivariate Data Visualization with R", but it fails when I try to "color them in" using panel.levelplot. ?utilities.3d says there

To everyone, Is there a way to extract coordinates or an equation from a "straight" contour line? Thanks. Cheers Julius Tesoro

I have searched this forum with keywords contour and percent, it only give one irrelevent result. My problems is how to plot contour in percent. In my figure, I have use kde2d to generate density of an array with two dimension point. Using image and contour could plot it. But the line contour generated represent absolute value of population, not how much pecent point within this cycle. So, i there

Hello, I have searched for documentation on the function contourLines's algorithm but cannot find a thing. I am about to submit a paper to a journal but cannot yet do so because I need to provide some reference for this function. Does anyone know what algorithm is used for this function? Thanks, Derek Lacoursiere -- View this message in context:

Full_Name: Dominik Heide Version: 2.3.1 OS: Linux (Suse 9.3) Submission from: (NULL) (134.76.220.200) The contour functions has sommewhere (I think in .../main/plot3d.c) a maximum number of line segments that is set using a define. The contour line in my data too long for this and therefore not correct analysed (I get the message 'contour(): circular/long seglist -- bug.report()!').

Friends, I have two covariance matrices (m1 and m2) of same size (150x150). I used contourplot function to make contour plots individually (c1 and c2). I am interested in making one contourplot overlapping the two individual contours so that the portion of the plot above and below the diagonal can represent the c1 and c2. Someone suggest me how can i do the same. Is there any way that i can

Hi all, I have a sample of n values from a bivariate distribution (from a MCMC procedure). How could I draw a contour plot of "the joint density" based on that sample ? Sorry if I was not too clear. Thans in advance, Regards, Caio [[alternative HTML version deleted]]

Dear all, I created a bivariate normal distribution: set.seed(138813) n<-100 x<-rnorm(n); y<-rnorm(n) and plotted a scatterplot of it: plot(x,y) Now I'd like to add the 2D-standard deviation. I found a thread regarding plotting arbitrary confidence boundaries from Pascal H?nggi http://www.mail-archive.com/r-help at r-project.org/msg24013.html which cites the even older thread

On 05/08/2010 8:46 PM, David B. Thompson, Ph.D., P.E., D.WRE, CFM wrote: > On Aug 5, 2010, at 5:20 PM, Duncan Murdoch wrote: > >> On 05/08/2010 7:18 PM, David B. Thompson, Ph.D., P.E., D.WRE, CFM wrote: >>> I'm running R 2.11.1 (MacBook Pro and OS X 10.6.4) and am trying to set a line type in the contour() function. What I did was: >>> >>>> >

Hello all. I'm confused a bit about contour plots. After reading the help at "?contour", it seems as though the contour plot is for 3D plots (x,y, and z). My data is in the form of grid coordinates (x,y), and I want to see a contour plot of the data so that I can tell where most observations lie. My question is simple but still evasive. Say my data is called places. One column

Hi all, I'm trying to draw a contour plot with rounded (smoothed) contour lines instead of sharp angles; when the grid consists of only a few points in x- and y- axis, the resulting contour is in facts rather ugly since very sharp angles may appear. I did not find any way to do it, by using either "contour" or "contourplot" (from the lattice package), I wonder if there