similar to: Time Dependent Cox Model

Hola a todos, -Estoy estudiando el efecto de dos genotipos (~tratamientos) en la aparición de síndrome metabólico (MetS) con datos longitudinales recogidos a tiempo 0,7,10,15,20 y 25 años. -He hecho un dataframe con las siguientes variables MetS: Síndrome Metabólico (Si=1,No=0) bmi: Indice de masa corporal (IMC) cuando se produce la conversión a MetS+ . Para los que permancen MetS-, esta variable

Dear R users, My question is more methodology related rather than specific to R usage. Using time on study as time in a cox model, eg: library(Design) stanf.cph1=cph(Surv(time, status) ~ t5+id+age, data=stanford2, surv=T) #In this case the 1000-day survival probability would be: stanf.surv1=survest(stanf.cph1, times=1000) #Age in this case is a covariate. #I now want to compare the above

Dear all, I was wondering if anyone can help? I am an R user but recently I have resorted to SAS to calculate the probability of the event (and the associated confidence interval) for the Cox model with combinations of risk factors. For example, suppose I have a Cox model with two binary variables, one for gender and one for treatment, I wish to calculate the probability of survival for the

Hi, I have the binned data (observed and generated from model)  that I would like to test using the anderson-darling goodness of fit test.  But I'm not sure which package in R to use. I tried ad.test(...) but it does not recognise the test by Vito Ricci in FITTING DISTRIBUTIONS WITH R   > ad.test(hist_hume_beec[,1],hist_hume_beec[,2]) Error: could not find function "ad.test"

Dear useRs, There is a new version 0.1-2 of the package surv2sample available on CRAN. Users of the previous versions should update because a bug in the function cif2.ks has been fixed. General information about the package: surv2sample provides various two-sample tests for right-censored survival data. Three main areas and corresponding methods are: * comparison of two survival

Dear useRs, There is a new version 0.1-2 of the package surv2sample available on CRAN. Users of the previous versions should update because a bug in the function cif2.ks has been fixed. General information about the package: surv2sample provides various two-sample tests for right-censored survival data. Three main areas and corresponding methods are: * comparison of two survival

You asked about survival curves with age scale versus follow-up scale. > fit1 <- coxph(Surv(time/365.25, status) ~ t5 + id + age, data=stanford2) > surv1<- survfit(fit1) > surv1 n events median 0.95LCL 0.95UCL 157.000 102.000 1.999 0.898 3.608 > summary(surv1, times=3) time n.risk n.event survival std.err lower 95% CI upper 95% CI 3 46 85 0.451

I haven't done any R memory debugging lately, but https://www.mail-archive.com/rcpp-devel at lists.r-forge.r-project.org/msg10289.html shows how I used to have gdb break where valgrind finds a problem so you could examine the details. Also, running your code after running gctorture(TRUE) can help track down memory problems. -Bill On Wed, Feb 7, 2024 at 12:03?PM Therneau, Terry M., Ph.D.

?I've hit a roadblock debugging a new update to the survival package.?? I do debugging in a developement envinment, i.e. I don't create and load a package but rather? source all the .R files and dyn.load an .so file, which makes things a bit easier. ? Running with R -d "valgrind --tool=memcheck --leak-check=full" one of my test files crashes in simple R code a dozen lines

All, I have data that looks like below. For each id there may be more than one value per day. I want to select a random value for that day for that id. The end result would hopefully be a matrix with the id as rows, date as columns and populated by the random hab value. Thanks to someone on here (Jim) I know how to do the matrix, but now realize I need to randomly select some of my values.

All, I have three columns of data: id, date, hab. I am trying to set up a matrix that has the id as the rows, date as columns, and the hab value as the data values. Each id/date combination can only have one hab value. I would like for it to look something like this" date 1, date 2, date 3. id 0001 2 1 2 0002 3 5 6 I don't know how to set

Hello List, I am modeling a binomial response (nest survival) and I want to incorporate a random effect, in this case site. I had previously been using glm with a custom link function, but my understanding is that lmer does not currently allow a custom link. Therefore, I was investigating if other procedures for mixed models will allow a custom link function. here is the custom link function: