similar to: Best way to arrange data

Hi all, I have the following data: rep1_treat rep2_treat rep1_control rep2_control 2 3 4 5 100 20 98 54 0 1 2 3 23 32 27

I have a column of 1000 datapoints from the normal distribution with mean 2 and variance 4. How can I get a histogram of these observations with 20 bins with each bin having 50 observations? -- Thanks, Jim. [[alternative HTML version deleted]]

Hi, I have a 2 x 10000 matrix of confidence intervals. The first column is the lower and the next column is the upper. I want to cont how many times a number say 12 lies in the interval. Can anyone assist? -- Thanks, Jim. [[alternative HTML version deleted]]

Dear all, I want to simulate from the null distribution of the following 2 x 3 table, 2 5 10 4 8 5 I am using a chi-squared test. Anyone has any idea how to do this? -- Thanks, Jim. [[alternative HTML version deleted]]

Is anyone aware of a fast way of doing fisher's exact test for a series of 2 x 2 tables in R? The fisher.test is really slow if n1=1000 and n2 = 1000. -- Thanks, Jim. [[alternative HTML version deleted]]

Hello all, I have two columns of numbers. I would like to do the following: (1) Plot both cdfs, F1 and F2 on the same graph. (2) Find smoothed approximations of F1 and F2 lets call them F1hat and F2hat (3) Find values for F1hat when we substitue a value of x in it. (4) Find the corresponding densities of the cdfs. Any ideas? -- Thanks, Jim. [[alternative HTML version deleted]]

Hello everyone, I am trying to estimate the parameter b. I have Y and X1 which I know and they are both random. However, I also have X2 which I don't know and is also random. I want to estimat b from the model: Y = b*X1 + ( 1 - b ) * X2 Can anyone offer some suggestions. The values of Y and X1 are both pvalues so they are constrained in (0,1). -- Thanks, Jim. [[alternative HTML version

Suupose I have y <- rbeta(10000, 2, 5) and I only want to see only the density plot from x = 0 to x = 1 How do I do this? -- Thanks, Jim. [[alternative HTML version deleted]]

I am doing a histogram with 2 superimposed densities. However, the density of one of the graphs is not coming out..its being erased.. Any ideas on how to fix this problem? -- Thanks, Jim. [[alternative HTML version deleted]]

How can I cbind three or more matrices like A,B and C. This does not work: cbind(A,B,C) -- Thanks, Jim. [[alternative HTML version deleted]]

Hi, I' ve read in several files with measurements into R data frames(works flawlessly). Each dataframe is named by the location of measurement and contains hundreds of rows and about 50 columns like this dataframe1. date measurment_1 .... mesurement_n 1 2 3 .. .. .. n For further processing I need to check whether or not ncol and colnames are the same for all dataframes. Also I need to

I a using plink on a large SNP dataset with a .map and .ped file. I want to get some sort of file say a list of all the SNPs that plink is saying that I have. ANyideas on how to do this? -- Thanks, Jim. [[alternative HTML version deleted]]

Hello, I have some discrete pvalues and I would like to sort them. Then add random noise so that they are ordered the same way as the original pvalues. Off course I don't want any pvalues less than 0 or greater than 1. Any ideas on how to do this in R? -- Thanks, Jim. [[alternative HTML version deleted]]

Hi, Can someone tell me how to remove rows of zeros from a matrix? For example if I have the following matrix, 0 0 0 1 2 8 0 0 4 56 I should end up with 0 1 2 8 4 56 -- Thanks, Jim. [[alternative HTML version deleted]]

I want to fit some p-values to a beta distribution. But the problem is some of the values have 0s and 1's. I am getting an error if I use the MASS function to do this. Is there anyway to get around this? -- Thanks, Jim. [[alternative HTML version deleted]]

> > Hi all, > I have a vector xm say: xm = c(1,2,3,4,5,5,5,6,6) > > I want to return a vector with the corresponding probabilities based on the > amount of times the numbers occurred. For example, I should get the > following vector for xm: > prob.xm = c(1/9, 1/9, 1/9, 1/9, 3/9, 3/9, 3/9, 2/9, 2/9) > Using prop.table gives: Usage (with table) > prob.xm <-

Hi all, I have a vector xm say: xm = c(1,2,3,4,5,5,5,6,6) I want to return a vector with the corresponding probabilities based on the amount of times the numbers occurred. For example, I should get the following vector for xm: prob.xm = c(1/9, 1/9, 1/9, 1/9, 3/9, 3/9, 3/9, 2/9, 2/9) Any help greatly appreciated. -- Thanks, Jim. [[alternative HTML version deleted]]

Full_Name: Frank Sch?ffer Version: 2.3.1 OS: Ubuntu 6.10 (Edgy Eft) Submission from: (NULL) (86.56.0.173) frank at darwin:~$ R R : Copyright 2006, The R Foundation for Statistical Computing Version 2.3.1 (2006-06-01) ISBN 3-900051-07-0 R ist freie Software und kommt OHNE JEGLICHE GARANTIE. Sie sind eingeladen, es unter bestimmten Bedingungen weiter zu verbreiten. Tippen Sie 'license()'

Hi everyone, I have the following problem. I have some small p-values but when I use qnorm(1-4e-30) I get an error. Is there anyway to get around this? -- Thanks, Jim. [[alternative HTML version deleted]]

I have data that ranges from 0.3 to 2 and I want to change the scale to be from 0 to 1. Can this be done in R? -- Thanks, Jim. [[alternative HTML version deleted]]