similar to: Best R text editors?

Displaying 20 results from an estimated 3000 matches similar to: "Best R text editors?"

2009 Mar 18
2
How do I set the Windows temporary directory in R?
I'm trying to redirect where temporary files go under R to D:\temp\somerandomname from its default (C:\Documents and Settings\username\Temp\somerandomname) -- how do I go about doing this? --j -- Jonathan A. Greenberg, PhD Postdoctoral Scholar Center for Spatial Technologies and Remote Sensing (CSTARS) University of California, Davis One Shields Avenue The Barn, Room 250N Davis, CA 95616
2009 Mar 13
2
Using format to add leading zeroes
I have a numerical vector which contains a (poorly) formatted time column, which, in theory, should be HHMM, but was distributed as an integer, so, for 12:15 am, it is saved as "15" (e.g. HHMM = 0015 with the zeroes stripped). I'm trying to use this in conjunction with strptime, but I'm thinking because each time is an integer ranging from 1 to 4 digits, I probably need to
2009 Jun 16
2
Statistically detecting thresholds...
Rers: I have some ecological data (stream velocity vs. % cover of submerged weeds) that shows strong evidence of a thresholding step-function, e.g. below some velocity, % cover ranges from 0% to 100% (with no apparent relationship to velocity within this range of velocities), but above a certain "threshold" velocity, the % cover does not appear to exceed, say, 10%. There are good
2009 Oct 23
2
splitting a vector of strings...
Quick question -- if I have a vector of strings that I'd like to split into two new vectors based on a substring that is inside of each string, what is the most efficient way to do this? The substring that I want to split on is multiple characters, if that matters, and it is contained in every element of the character vector. --j -- Jonathan A. Greenberg, PhD Postdoctoral Scholar
2009 Jul 01
3
"Error: cannot allocate vector of size 332.3 Mb"
Dear R-helpers, I am running R version 2.9.1 on a Mac Quad with 32Gb of RAM running Mac OS X version 10.5.6. With over 20Gb of RAM "free" (according to the Activity Monitor) the following happens. > x <- matrix(rep(0, 6600^2), ncol = 6600) # So far so good. But I need 3 matrices of this size. > y <- matrix(rep(0, 6600^2), ncol = 6600) R(3219) malloc: ***
2009 Apr 07
1
Constrained, multiple response statistics
R'ers: I was hoping I could get some direction on this. I have a dataset of the form: Y1,Y2,...,YM = f(X1,X2,...,XN), where N is >>> M The response data (Y1,Y2,...,YM) is frequency data, such that the sum of all Yi = 1.0. Both Xj and Yi are continuous variables. I'm trying to figure out the best approach(es) to solving for the model f() -- any ideas? I could solve
2009 Jul 06
7
Testing memory limits in R??
Hello Everyone, We have recently purchased a server which has 64GB of memory running a 64bit OS and I have compiled R from source with the following config ./configure --prefix=/usr/local/R-2.9.1 --enable-Rshlib --enable-BLAS-shlib --enable-shared --with-readline --with-iconv --with-x --with-tcktk --with-aqua --with-libpng --with-jpeglib and I would like to verify that I can use
2009 Jan 25
2
.Renviron for multiple hardwares...
Our lab has a lot of different unix boxes, with different hardware, and I'm assuming (perhaps wrongly) that by setting a per-user package installation directory, the packages will only work on one type of hardware. Our systems are all set up to share the same home directory (and, thus, the same .Renviron file) -- so, is there a way to set, in the .Renviron file, per-computer or
2009 Nov 02
2
"Safe" way to automatically install required packages...
R-helpers: I'm working on an r-package that I want to make as easy-to-use as possible for a novice R-user, which includes automatically installing required packages. I, myself, am a novice R-packager, so the solution I came up with was to embed: print("Loading required packages...") if (!require("reshape")) { install.packages("reshape") } if
2010 Jan 28
2
Data frame of different sized lists in a function call
I'm hoping to get some "best practice" feedback for constructing a function call which takes an undefined set of DIFFERENT length vectors -- e.g. say we have two lists: list1=c(1:10) list2=c(2:4) lists = data.frame(list1,list2) coerces those two to be the same length (recycling list2 to fill in the missing rows) -- what is a quick way of having each of those lists retain their
2011 Aug 23
5
Easier ways to create .Rd files?
R-helpers: Are there any ways to auto-generate R-friendly (e.g. will pass a compilation check) .Rd files given a set of .R code? How about GUIs that help properly format the .Rd files? Thanks! I want a basic set of .Rd files that I can update as I go, but as with most things my documentation typically lags behind my coding by a few days. --j -- Jonathan A. Greenberg, PhD Assistant Project
2010 Jan 20
1
x,y plot question (two sets of labels)
I'm trying to figure out the best way to do a scatterplot using the following data as an example: plothelp_x=1:10 plothelp_A1=sin(plothelp_x) plothelp_A2=tan(plothelp_x) plothelp_B=c("A","B","C","A","B","C","A","B","C","A") (note that all 4 of these vectors have 10 entries each) What I would
2009 Oct 28
1
Aggregate and cross tabulation
R-helpers: I have a data frame containing 4 factor variables (let's say A,B,C, and D) and 1 numerical variable (N). I would like to produce a cross-tabulated data frame in which A,B,C are individual columns, each factor of D is its own column, and the field is calculated as a given function of N (I would like to have two output data frames, one with the mean(N) and one with the
2007 Jul 05
1
(no subject)
I'm trying to hunt down an appropriate kriging package for my specific application, and I was hoping someone on the R list might have some pointers -- I'm interested in performing kriging and related spatial interpolations with one of the R packages, but I need to be able to provide my own point-to-point distances (e.g. I do not want to use standard between point distances, as calculated
2011 Jun 29
1
Querying the path separator?
Hopefully this is a pretty easy fix -- I need to have R query the path separator for some code I'm trying to write (it involves using a system() call) -- the call requires a path and a wildcard, e.g.: command="mycommand /path/to/*.files" in the case of unix or, command="mycommand.exe C:\\path\\to\\*.files" on a windows box System.which is working correctly, so the
2010 Aug 25
2
Removing inter-bar spaces in barchart
Rhelpers: I'm trying to make a barchart of a 2-group dataset (barchart(x~y,data=data,groups=z,horizontal=FALSE)). My problem is that I can't, for the life of me, seem to get rid of the inter-bar space -- box.ratio set to 10000 doesn't do much. Any ideas? I'd ideally want zero space between the bars. Thanks! --j -- Jonathan A. Greenberg, PhD Assistant Project Scientist
2013 Apr 16
4
Singular design matrix in rq
Quantreggers: I'm trying to run rq() on a dataset I posted at: https://docs.google.com/file/d/0B8Kij67bij_ASUpfcmJ4LTFEUUk/edit?usp=sharing (it's a 1500kb csv file named "singular.csv") and am getting the following error: mydata <- read.csv("singular.csv") fit_spl <- rq(raw_data[,1] ~ bs(raw_data[,i],df=15),tau=1) > Error in rq.fit.br(x, y, tau = tau, ...) :
2012 May 02
6
Quickest way to make a large "empty" file on disk?
R-helpers: What would be the absolute fastest way to make a large "empty" file (e.g. filled with all zeroes) on disk, given a byte size and a given number number of empty values. I know I can use writeBin, but the "object" in this case may be far too large to store in main memory. I'm asking because I'm going to use this file in conjunction with mmap to do parallel
2013 Jul 12
2
"Proper" way to use a "hidden" function in an R-package?
R-developers: I'm working on updating my R package "spatial.tools", and one thing I was wondering was the proper way to have hidden functions -- should I simply not export them to the namespace and use the ::: operator to call them (which is what I currently do)? --j -- Jonathan A. Greenberg, PhD Assistant Professor Global Environmental Analysis and Remote Sensing (GEARS)
2004 Feb 19
4
1024GB max memory on R for Windows XP?
I have 2GB installed on my windows XP box running R 1.9.0, and after performing a prune.tree(intree,newdata), I get an out of memory error within R, but it says the maximum allowed is 1024gb (1/2 of what I have!) Can R not use more than 1GB on an XP box? I noticed I had ~600mb left over after R conked out, so clearly I had more memory... What about virtual memory? --j -- Jonathan Greenberg