similar to: ncdf

Dear R users I am attempting to add lncdf_1.6.tar.gz libraries within R, and have failed. I have R version 2.8.1, and are running on fedora 10 Kernel Linux 2.6.293.-60.fc10.x86_64. I've run R CMD INSTALL ncdf_1.6.tar.gz and I have the following --------------- * Installing to library '/usr/lib64/R/library' * Installing *source* package 'ncdf' ... checking for gcc... gcc

Friends, I tried to install ncdf package in ubuntu with the following command. R CMD INSTALL --configure-args="-with-netcdf_incdir=/apps/netcdf/4.0.1/gcc/include -with-netcdf_libdir=/apps/netcdf/4.0.1/gcc/lib" ncdf_1.6.tar.gz The installation was stopped throwing the following error. I tried to google it but didnt find any solution. someone kindly write me what is going wrong. **

Dear all, I'm having issues with the installation of the ncdf package. It returns a non-zero exit status. Can anyone suggest what I should do next? FYI, I do not have problems installing other packages. Thanks. Muhammad * installing *source* package ?ncdf? ... checking for nc-config... /usr/local/bin/nc-config configure: creating ./config.status config.status: creating src/Makevars **

Dear All, I recently got a 64bit machine and had netcdf-3.6.2 installed. Then I tried to install ncdf package but got the following error message when using netcdflib: gcc -std=gnu99 -I/home/ljin/share/R-2.6.1/include -I/home/ljin/share/R-2.6.1/include -I. -I/usr/local/include -fpic -g -O2 -c ncdf2.c -o ncdf2.o gcc -std=gnu99 -I/home/ljin/share/R-2.6.1/include

Hi All, I am trying to install ncdf package on a Linux 64-bit machine. I successfully installed netcdf using this command, ./configure --prefix=/home/challar/netcdf/ --disable-netcdf4 I then tried to install ncdf package in R R CMD INSTALL --configure-args="-with-netcdf_incdir=/home/challar/netcdf/include -with-netcdf_libdir=/home/challar/netcdf/lib" ncdf_1.6.3.tar.gz I get this

Greetings. I am attempting to add NetCDF libraries within R, and have failed. We have R version 2.8, and are running on a 64-bit Redhat Linux 2.6.18 kernel: Red Hat Enterprise Linux Client release 5.2 (Tikanga) Linux halfmoon.ncdc.noaa.gov 2.6.18-92.1.22.el5 #1 SMP Fri Dec 5 09:28:22 EST 2008 x86_64 x86_64 x86_64 GNU/Linux I have run the installation instructions found at

Hello, I'm trying to install ncdf4 on RHEL 5.8, R version 2.15.1. Previously installed is netcdf 3.6.2 from Red Hat, so I've compiled and installed netcdf 4.2.1.1 (with hdf5 and zlib as per install instructions, and also set --enable-netcdf4 option) into /usr/local. When attempting to install ncdf4 it is failing with: ** testing if installed package can be loaded Error in

I imagine this "where are your header files" problem comes up in other packages, so I'm asking this as a general R question. How should configure scripts be re-written so they look in more places? Briefly, the problem is that Fedora-Extras installs the header files in a subdirectory /usr/include/netcdf-3 rather than /usr/include: # rpm -ql netcdf-devel /usr/include/netcdf-3

Greetings all, I recently tried to install RNetCDF from within R (install.packages) on Fedora Core 8 (with netcdf 3.6.2 and netcdf-devel 3.6.2 already installed). This resulted in an error because the netcdf header files are installed in /usr/include/netcdf-3 rather than /usr/include which is where RNetCDF looks for them. This problem was described in a 2006 post (see below), but no

Buenas tardes, pido disculpas si mi consulta es demasiado elemental, pero actualmente encuentro una gran barrera para continuar mi trabajo si no lo solvento. Soy usuaria principiante de R, estoy trabajando con una base de datos climática <https://digital.csic.es/handle/10261/104742>que se encuentra en formato netcdf4 y necesito transformarla a la versión 3 con el fin de visualizarlo en un

Dear R communities Could you please help me with the problem I encounter while trying to install the ncdf package? download.packages("ncdf", "/home/user/soft/R/library/") cd /home/user/soft/R/library R CMD INSTALL ncdf_1.6.tar.gz # fail sudo R CMD INSTALL ncdf_1.6.tar.gz # fail cd /home/user/soft/ # download

Redhat's Security Enhanced Linux (in some modes) generates messages like that when code in a shared library is not compiled to have position independent code. I.e., the -fpic or -fPIC flag was not supplied when compiling. Your build log showed that -fpic was used when compiling your code, but the 3rd party library, libnetcdf.a may not have been compiled this way. The command

Hi All, i'm on a debian linux 64bit, i'm tying to install the netcdf intraface, i tried both ncdf and ncdf4 but trying to build i received the error : (i have necdf installed on my machine and it is able to fiund it .. no missed .h) epy at epinux:~$ sudo R CMD INSTALL --configure-args="-with-netcdf_incdir=/usr/include -with-netcdf_libdir=/usr/lib" ncdf4_1.8.tar.gz *

Hi All, i'm on a debian linux 64bit, i'm tying to install the netcdf intraface, i tried both ncdf and ncdf4 but trying to build i received the error : (i have necdf installed on my machine and it is able to fiund it .. no missed .h) epy at epinux:~$ sudo R CMD INSTALL --configure-args="-with-netcdf_incdir=/usr/include -with-netcdf_libdir=/usr/lib" ncdf4_1.8.tar.gz *

Hello all, I set 'UDUNITS_PATH' and 'NETCDF_PATH' successfully to my custom places and then % R CMD INSTALL RNetCDF_1.1-3.tar.gz and got this: ... checking for executable suffix... checking for object suffix... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for main in -lnetcdf... yes checking for main in -ludunits...

Dear all, I am attempting to convert 10 NetCDF files into a single NetCDF file, due to the data input requirements of a model I hope to use. I am using the ncdf package, version 1.6. The data are global-scale water values, on a monthly basis for 10 years (ie. 120 months of data in total; at present the data are separated by year, with 12 months of data in each file - mrunoff_1986 through to

Hi, I'm using the "ncdf" library for creating ncdf files. But I need to create about 100 variables per file (e.g. single rivers), So I do not like to create each variable separately. Unfortunately I found no way to make this work, as I'm unable to create a correct list of class "var.ncdf". ###code piece river=list(mode='var.ncdf', length=nriv)

Dear All, Can anyone please let me know how exactly ncdf deals with NaN. I am trying to pass in a vector of data that has some NaN in it, into a variable in NetCDF. dimX <- dim.def.ncdf("X","count",(1:6)) dimY <- dim.def.ncdf("Y","count",(1:3)) var1 <-

Hi there, I'm more or less new to R and have just installed R on my MAC laptop. I managed to install everything easily enough (R version 2.9) and a few packages, but when I try to load the ncdf package (in R) I get the following error: library(ncdf) Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared library

Dear all, I have a problem in writing a variable to a NetCDF-File. My code works pretty well until the step put.var.ncdf(): # Get variables #--------------------- data1 <- open.ncdf("PREC_me_03-1500.nc") prec1 <- get.var.ncdf(data1,"PRECT") dim.time <- get.var.ncdf(data1,"time2") close.ncdf(data1) # Calculation #--------------------- spi24.me <-