similar to: sub-architecture installation difficulty with various valgrind-instrumentation levels

"R Installation and Administration", section 2.5 "Sub-architectures" describes calling specific builds of R using the call "R --arch=name". I am trying to build and install three versions of R-2.9.1, each configured with a different valgrind-instrumentation level ("Writing R Extensions", section 4.3.2 "Using valgrind"). My goal is to be able to

A new version of the Windows batchfiles is available. CHANGES The key change is the new R.bat utility. R.bat has a new interface and extended functionality covering many of the other prior utilities. (These older utilities are no longer needed and have been removed.) Unlike R.bat which requires no configuration the new Rpathset.bat utility is configured by manually changing the Windows batch

A new version of the Windows batchfiles is available. CHANGES The key change is the new R.bat utility. R.bat has a new interface and extended functionality covering many of the other prior utilities. (These older utilities are no longer needed and have been removed.) Unlike R.bat which requires no configuration the new Rpathset.bat utility is configured by manually changing the Windows batch

I am trying to do a classic R -d valgrind --vanilla < mypkg-Ex.R as described in http://cs.swan.ac.uk/~csoliver/ok-sat-library/internet_html/doc/doc/R/2.9.1/doc/manual/R-exts.html#Using-valgrind The problem is valgrind crashes imediately. I am using Ubuntu 10.04 LST (actually Biolinux) on a 64bit Dell Precision laptop with 4 core-i5 Intel processors. I have R-2-15-0 installed from source

Full_Name: David O. Nelson Version: 1.4.1 OS: solaris 2.7 Submission from: (NULL) (128.115.150.74) Putting patterns in .Rbuildignore has no effect when the tar being used is gnu tar (1.13) on solaris 2.7, whilst /usr/sbin/tar works perfectly. TO REPRODUCE: The current directory contains a source package directory ./mypkg... bimini.jgi-psf.org% echo >mypkg/foo bimini.jgi-psf.org% echo

Hi, my name is Paula. Im trying to learn how to build an R package in Windows XP using a simple example which includes a C source code. The foo.c file is located in mypkg/src/foo.c. I used the command Rcmd build --force --binary [pkgpath]. The problem is when I install the zip file in R the function foo doesn?t exist. The result a recieved during the building process is copied below. I really

Hi R Gurus! I'm trying to create a test package using the package.skeleton function. I wanted to add some compiled code too. In the src library, I put together a baby subroutine, compiled it and created a test.dll When I use the R cmd build, it works fine. But I get into trouble with the R CMD check section. /home/Desktop/R-2.5.1/bin # ./R CMD check mypkg * checking for working latex ...

While installing software on a new computer, I thought I would try to use Cygwin to build an R package. (Note: NOT Ripley/Murdoch's Rtools). I uncovered and solved two issues, one of which appears to be identical to a problem previously reported (and unsolved) on this list. I offer this information in case it will be helpful. (1) Cygwin defaults to UNIX mode when installed, but it appears

Hello useRs I am trying to build a package for personal use and for making easier working with other people but I keep getting the same error message about the DESCRIPTION file not existing. when trying to install from a source tar.gz file: Error in .read_description(dfile) : file 'C:/Users/Propriétaire/AppData/Local/Temp/RtmpHFMONb/R.INSTALL647a3535/mypkg/DESCRIPTION' does not

Hi: I'm trying to create a package to pass to someone else to use a group of functions with help files. I'm working on Windows XP. Step One: I use the example > ## two functions and two "data sets" : > f <- function(x,y) x+y > g <- function(x,y) x-y > d <- data.frame(a=1, b=2) > e <- rnorm(1000) > >

I'm having a very hard time making R CMD check produce a clean check on examples because of the timings inserted into examples by R CMD check. I am getting a difference on every example output caused by timing information being inserted by 'R CMD check'. The current 'Writing R Extensions' manual[1] states on p. 14: If directory tests has a subdirectory Examples

Jun hi again! Sorry for bothering. Although I had no problem with building Windows package under Linux, I noticed that man pages are not processed as they should or maybe I have a problem with my setup. My package is called 'GeneticsPed'. Instead of HTML or text files I just got a GeneticsPed.Rd.gz in man directory of a package (this is within GeneticsPed_0.1.zip file!). The file

Dear list, I've a package, myPkg, which was developed on R v 2.6.1. I have installed R v2.9.2 from source, with a shared library and tcktk support. The package, myPkg, depends on RSPerl, and imports it in its NAMESPACE. I've downloaded and installed RSPerl using command: >R CMD INSTALL -c --configure-args="--with-modules='IO \ Fcntl Socket Storable XML::Parser::Expat

Hi, 'R CMD INSTALL mypkg' and 'install.packages(mypkg, repos=NULL)' don't update mypkg help pages when mypkg is a source directory. They only install new help pages if there are some but they leave the already installed pages untouched. So you end up with mixed man pages from different versions of the package :-/ I found no mention of this in 'R CMD INSTALL --help' or

I would like to be able to load two versions of a package at once and to do that was thinking of giving each version a different package name in the DESCRIPTION file and the building and installing each such version separately. library(myPkg1) library(myPkg2) and then use myPkg1::myFun() and myPkg2::myFun(). To do that easily it would be convenient if one could change the package name in only

Dear friends, I am writing a package that I think may be of interest to many people so I am in the process to build-check-write-thedocumentation for it. I have some questions regarding the "rules" that a package should abide in order to be consistent with the other packages on CRAN. I have read and reread the Writing R extension manual and googled the mailing list and I have found

I am building a package say mypkg. Five months ago, when I built the package I got the mypkg manual in pdf format. Today, after making updates, I build the same package, same name, and steps; unfortunately I do not get the manual in pdf format. Rather I get the following message: cd: can't cd to /cygdrive/c/Documents saving output to 'mypkg-manual.pdf' ...Done Could any one

----- Forwarded by Ajay DAS/US/BMNA01 on 05/19/2008 03:11 PM ----- Ajay DAS To: r-help

Hi list, Calling setGeneric()/setMethod() from within the .onLoad() hook of MyPkg package produces the following error: > gctorture(TRUE) > library(MyPkg) .onLoad(): ok1 .onLoad(): ok2 Error : protect(): protection stack overflow Error : .onLoad failed in 'loadNamespace' for 'MyPkg' Error: package/namespace load failed for 'MyPkg' This is with

Hi, I am getting an error when I am trying to build a library in R for windows . I am using R 2.7.0 in windows. I am following the instructions listed in the R Help for package creation. require(stats) ## two functions and two "data sets" : f <- function(x,y) x+y g <- function(x,y) x-y d <- data.frame(a=1, b=2) e <- rnorm(1000)