similar to: Activation Functions in Package Neural

with pred.pca<-predict(splits[[i]]$pca,trainingData at samples)[,1:nPCs] dframe<-as.data.frame(cbind(pred.pca,class=isExplosive(trainingData,2))); results[[i]]$classifier<-ksvm(class~.,data=dframe,scaled=T,kernel="polydot",type="C-svc", C=C,kpar=list(degree=degree,scale=scale,offset=offset),prob.model=T) and a degree of 5 i get an error of 0 reported by the ksvm

Does anyone know how to get the C-index from a logistic model - not using the dataset that was used to train the model, but instead using a fresh dataset on the same model? I have a dataset of 400 points that I've split into two halves, one for training the logistic model, and the other for evaluating it. The structure is as follows: column headers are "got a loan" (dichotomous),

Hello all, I have generated a principal components regression model using the pcr() function from the PLS package (R version 2.12.0). I am getting a "non-conformable arguments" error when I try to use the predict() function on new data, but only when I try to read in the new data from a separate file. More specifically, when my data looks like this #########training data

Just curious if anyone else has got this error before, and if so, would know what I could do (if anything) to get past it: > mtry <- tuneRF(training, trainingdata$class, ntreeTry = 500, stepFactor = 2, improve = 0.05, trace = TRUE, plot = TRUE, doBest = FALSE) mtry = 13 OOB error = 0.62% Searching left ... mtry = 7 OOB error = 1.38% -1.222222 0.05 Searching right ... mtry = 26

Hi list, I´m working on a predictive modeling task using the caret package. I found the best model parameters using the train() and trainControl() command. Now I want to evaluate my model and make predictions on a test dataset. I tried to follow the instructions in the manual and the vignettes but unfortunately I´m getting an error message I can`t figure out. Here is my code: rfControl <-

Hi all, I have a large data set and want to immediately build a 'blind' model without first examining the data. Now it appears in the data there are a lot of fields that are constant or all missing values - which prevents the model from being built. Can someone point me the right direction as to how I can automatically purge my data file of these useless fields. Thanks in advance, pdb

Dear all, I have a variable that I would like also to use it as a string. The reasons is that I want to collect results from different function to one table.. So when I use the  colnames(mymatrix) <-c(function1.function2,function3) the function1, function2, function3 to be "converted" to simple strings so as  colnames(mymatrix)

Hi all I am using the caret package and having difficulty in obtaining the results using regression, I used the glmnet to model and trying to get the coefficients and the model parameters I am trying to use the extractPrediction to obtain a confusion matrix and it seems to be giving me errors. x<-read.csv("x.csv", header=TRUE); y<-read.csv("y.csv", header=TRUE);

Hi, I've completely forgotten how to do R, and it seems I can't even load simple files correctly. I have two tab deliminated text files (attached, these were test files of the larger data files I'm trying to work with) that I am trying to load into R so that I can merge them. They were originally excel files but I used "saved as" to reformat to text. I don't know if

Hi, I know this can be done in Stata (which is quite messy) but I wanted to know if it can be done in R. So lets say I have a merged data set (I used the merge function by date for the attached two files), where all the missing values are filled with NAs (which is what the all.x=TRUE does). Is there any way to replace those NAs with the value of the latest row that contains a value? For

Dear R experts, I have been given data files in the following configuration and have been puzzling about how to read them in. First I will give a snippet of the beginning of file: Data File: W Para File: GABOR_0.gor v 10.6, Date : 29/10/2007 Time : 13:33 3.00 5.000 Noise SD (deg): 15.000 1 -5.321 -5.321 2 -5.321 -3.991 3 -5.321 -2.661 4 -5.321 -1.330 5 -5.321 0.000 6 -5.321 1.330 7

I have a text file that has semi-colon separated values. The table is nearly 10,000 by 585. The files looks as follows: ******************************************* First line: Skip this line Second line: skip this line Third line: skip this line variable1 Variable2 Variable3 Variable4 Unit1 Unit2 Unit3 10 0.1 0.01 0.001 20

The Wine development release 1.3.11 is now available. What's new in this release (see below for details): - PO files now used for translations. - Various JavaScript improvements. - Some fixes to the Wine debugger. - Translation updates. - Various bug fixes. The source is available from the following locations: