similar to: Renviron.in error when compiling R 2.9.1 under Debian.

First I tried 'setenv R_SHELL /usr/local/bin/bash', as bash is the weapon of choice for the faculty wishing to use R, then ran ./configure as before. The ./configure output line using as R_SHELL for scripts ... /usr/local/bin/bash would seem to indicate that the R_SHELL environment variable was recognized and acknowledged. However, I got the same build error: gnumake[2]: Entering

I need to install rpy2 on RHEL6. The version of R in the 6 repos is 3.0, and rpy2 does not work with that version. I installed R 3.3.3 following the directions here: https://oguya.ch/posts/2017-03-18-building-R-on-rhel-6/. But even with 3.3.3 it's still failing. Using pip it fails with: /usr/local/lib64/R/lib/libR.a(CommandLineArgs.o): could not read symbols: Bad value and installing from

Hi - I am having trouble installing rpy2. I have already compiled R as a shared library, but I do not have admin privileges on so I am trying to install rpy2 with: pip install -user rpy2 but I am getting the following error: ======================================== ./rpy/rinterface/_rinterface.c:86:31: fatal error: readline/readline.h: No such file or directory compilation terminated. error:

Dear list, When calling R from C, what appears like a spurious error can be triggered during the execution of chisq.test(x, y). This is happening when the following conditions are met: - x and y are "anonymous" C-level R vectors (they do not have a symbol), but they are protected from garbage collection - x and y are "not too small" (it was experienced as soon as they are

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I'm using R 1.6.1 on Windows 95 with cygwin bash as my shell. The 'shell' command tries to determine which shell the user prefers via the following steps: shell <- Sys.getenv("R_SHELL") if (!nchar(shell)) shell <- Sys.getenv("SHELL") if (!nchar(shell)) shell <- Sys.getenv("COMSPEC") For me, shell

> On Jul 20, 2017, at 7:53 AM, Larry Martell <larry.martell at gmail.com> wrote: > > I need to install rpy2 on RHEL6. The version of R in the 6 repos is > 3.0, and rpy2 does not work with that version. I installed R 3.3.3 > following the directions here: > https://oguya.ch/posts/2017-03-18-building-R-on-rhel-6/. But even with > 3.3.3 it's still failing. Using pip it

Dear list members, i am currently want to install Rpy2 in a linux box which has R 2.4.0 installed RPy requries R 2.7.0 or above but i have no root previlleges so my question is how to install R 2.7.0 on my own directory? and replace the system installed R 2.4.0 when i input R command from the bash Shell? thanks for any reply. Best Regards! -- Daofeng Li,PhD Candidate China Agricultural

Hi CRAN people, There is an issue with python-rpy on Ubuntu, when installed from the CRAN repository. (I read the info on http://cran.r-project.org/bin/linux/ubuntu/ and saw the note that this package is experimental but you are happy to receive feedback on it.) After adding the appropriate CRAN repo: % sudo apt-get install python-rpy [ ... installs various dependencies ... ] % echo import rpy |

Just installed a 1st time use of R on a win vista 64 box (4gigram) but asked for the 32 bit version.. I plan to use via Rpy and or Rpy2 installation is via "R-2.12.0-win.exe" got the following when trying to test... raise RuntimeError("Unable to locate R.dll within %s" % R_HOME) RuntimeError: Unable to locate R.dll within C:\PROGRA~1\R\R-212~1.0 Sure 'nuff when I go

Am Freitag, 29. September 2017, 16:20:37 CEST schrieb Dirk Eddelbuettel: > On 29 September 2017 at 14:50, Michael Rutter wrote: > | Corrected packages are now on the RRutter PPA ( > | https://launchpad.net/~marutter/+archive/ubuntu/rrutter) and soon on CRAN > | mirrors. > | > | If you have any issues or questions, please let me know. > > Nice work--thanks so much for the

Hi, I'm running Ubuntu Jaunty, downloading R and Rpy from this repository: deb http://cran.uk.r-project.org/bin/linux/ubuntu jaunty/ When was automatically upgraded, Rpy (which should be downloaded from the same repository) seems to have stopped working. I've tried re-installing the python-rpy package manually. I get the following error when I try to import rpy: >>> import

All- Thanks in advance for your help. I'm trying to call R function using Python in a windows environment and have downloaded the Rpy library however it doesn't appear to work with R 2.7.2. Does anyone know if a new version of Rpy exists for windows that will work with R and where it can be downloaded from? Here's an example of the error I'm getting:

Hi, In Rcpp, we now have a "Function" class to encapsulate functions (they cover all three kinds, but this may change). To call the function, what we do is generate a call with the function as the first node and then evaluate the call. SEXP stats = PROTECT( R_FindNamespace( mkString( "stats") ) ); SEXP rnorm = PROTECT( findVarInFrame( stats, install( "rnorm") ) )

Hi, I got "Floating point exception" when running linux/syslinux using syslinux 3.72. How to reproduce: 1. On debian Etch, kernel 2.6.24-etchnhalf.1-686 2. wget http://www.kernel.org/pub/linux/utils/boot/syslinux/syslinux-3.72.tar.bz2 3. tar xvjf syslinux-3.72.tar.bz2 4. syslinux-3.72/linux/syslinux --help 5. An error message "Floating point exception" was shown. Same problem

Recorded here so others may avoid my mistakes. I have a bunch of files containing fixed width data. The R Data guide suggests that one pre-process them with a script if they are large. They were 50MG and up, and I needed to process another file that gave the layout of the lines anyway. I tried rpy to not only preprocess but create the R data object in one go. It seemed like a good idea; it

Hi, Have installed Ubuntu packages for R by adding: deb http:///bin/linux/ubuntu hardy/ to my /etc/apt/sources.list file and using: sudo apt-get update sudo apt-get install r-base I understand that to enable shlib I need to download source files to my home directory. When I run apt-get source r-base I get the message: You must put some 'source' URIs in your sources.list Fair enough!

Dear friends of R, I want to produce a pdf file with the contents of a matrix. I employ the latex command in combination with dvi, both contained in the Hmisc package. It seems to me that the function does not correctly set the directory. > tbl.loc <- matrix(1:4, nc=2) > latex.obj <- latex(tbl.loc) > dvi(latex.obj) warning: extra args ignored after 'cd' H:\PROJECTS\data

After Johannes set up the CRAN repository for Jessie, I had quite some trouble figuring out what any user should do to have a running and up-to-date R in Debian (particularly Testing). Part of the problem is, I think, the overwhelming documentation on the page "DEBIAN PACKAGES OF R SOFTWARE" which is provided on CRAN at /bin/linux/debian. Some information is also lacking in places.

Hi While installing RPy2, I had curious problems which, if I traced them back correctly, have their root in the way that libR.so find the R installation directory. I wonder if this might be a subtle bug that only causes problems when one has several versions of R on one system but then can be very annoying and cause very strange behaviour. It seems to me that libR.so asks the Unix shell to