similar to: RSPerl and Statistics::R

Dear R-users, I am new to R and would like to use it for fitting the zipf distribution to some numeric data that I have. Here's the snippet that I use: library(VGAM) X <- read.table(file("~\\mydata.txt", encoding="latin1")) w <- as.vector(t((X[2]))) w <- w/sum(w) y <- (1:length(w)) fit = vglm (y ~ 1, zipf, tra=TRUE, weight=w) zipf(N=NULL,

Dear All I have a question about the hypergeomteric distribution. Example 1: I have a universe of 6187 objects, and 164 have a particular attribute, therefore 6187-164 do not have that attribute. I sample 249 of those objects, and find that 19 have that attribute. I get a p-value here (looking at just over-representation): phyper(19, 164, 6187-164, 249, lower.tail=FALSE) [1] 7.816235e-06

Dear List, I am having a problem triggered by having R-2.8 (R version 2.8.0 Patched (2008-11-15 r46953)) installed on Mac OS X 10.5. The steps needed to generate the error are: - install a binary distribution of R (default location) - add R to the PATH - install the python module pycairo (http://www.cairographics.org/releases/pycairo-1.4.12.tar.gz) That last step results in an error, and the

Dear list, My favorite output format is usually pdf. I can include the graphics in pdflatex documents and benefit from the scalable nature of vector graphic formats. However, I recently had to generate high-res 2D levelplot graphics as in the example below, N <- 100 # N <- 1000 # slow to diplay xy <- expand.grid(x=seq(0, 10, length=N), y=seq(0, 10, length=N)) xy <- within(xy,

Hello, I am trying to install a program based on R, but I am receiving the following error message: root at darkstar:/home/maria/UCS# perl System/Install.perl Error: Can't run the R interpreter (/usr/local/bin/R). Please make sure that R is installed and specify the fully qualified filename of the R interpreter with -R if necessary (see "doc/install.txt"). I do have installed R,

Dear HelpeRs, I have created a tar.gz package (the package was created on unix) and I would like to install it in R on a Windows operating system. As far as I know, R in Windows accepts only packages in zip file for installation and I could not find a way to install a tar.gz file. I would like to mention that I  installed the package on unix using install.packages and it works. I also tried to

Hi all I have the following regular expression problem: I want to find complete elements of a vector that end in a repeated character but where the repetition doesn't make up the whole word. That is, for the vector vec: vec<-c("aaaa", "baaa", "bbaa", "bbba", "baamm", "aa") I would like to get "baaa" "bbaa"

Hi everyone! I think I stumbled over a bug in the latest R 2.9.2 patched for OS X: > R version 2.9.2 Patched (2009-09-24 r49861) > i386-apple-darwin9.8.0 When I try to sort latin1-encoded character vectors, R sometimes crashes with a segmentation fault. I'm running OS X 10.5.8 and have observed this behaviour both with the i386 and x86_64 builds, in the R.app GUI as well as on

Hello everyone, I'm currently trying to export a couple of graphs to pdf . Postscript would be fine too, but I'm using odd page dimensions, which seem to be overwritten when using the "ps2pdf" command. I'm using the pdfpages package in LaTeX to put 6 graphs onto one page (this is why it ought to be a pdf in the end). I have two problems: 1. I'm using

Dear list, I have updated to version R-2.10.0. When I try to load the RSPerl library I get the following error: > library(RSPerl) Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared library '/usr/local/lib/R/library/RSPerl/libs/RSPerl.so': /usr/local/lib/R/library/RSPerl/libs/RSPerl.so: undefined symbol: boot_DB_File__Glob Error: package/namespace load failed

If anyone can help it would be very much apreciated... System RedHat 9 R installed as # ./configure --enable-R-shlib # make # make install and R seems to work fine ... Then I do # R INSTALL --clean --configure-args='--with-in-perl' RSPerl_0.5-7.tar.gz # export R_HOME=/usr/local/lib/R # cd /usr/local/lib/R/library/RSPerl/examples/ # perl -I

Hi, I'm trying to install de RSPerl module and i have some problems trying to test it. I've tried to contact with the author but the e-mail address seems not to exist. Hope that anyone in this list could explain me a little about this problem. I have a bash shell and what i do is the following: #PERLLIB=/usr/lib/R/library/RSPerl/share/blib/arch:/usr/lib/R/library/RSPerl/share/blib/lib #

Hello, Has anyone gotten RSPerl ( (http://www.omegahat.org/RSPerl/) to work on Mac OS X? After installing RSPerl, I run the test program (or, even simpler, perl -e 'use R;') and get the following error: dyld: perl Undefined symbols: _RPerl_createRProxy _RPerl_discardRProxy _RPerl_getProxyValue _RPerl_getReferenceName _addPerlConverterRoutine _fromPerl _tryEval _userLevelConversionToPerl

Hi, I am having problems installing RSPerl 0.92-1 in my Mac OSX 10.5.1. I?ve installed correctly R-2.6.1 with the .mpkg. I run the next command: <R CMD INSTALL --configure-args=' --with-in- perl ' RSPerl> And the next error message appears: RSPerl * Installing to library '/Library/Frameworks/R.framework/Resources/ library' * Installing *source* package

Hi, I've just started using RSPerl. Though also tests in directory "/usr/local/lib/R/library/RSPerl/tests/" are passed successfully, I meet the problem with the following codes; use strict; use warnings; use R; use RReferences; my @array1=1..10; my @array2=1..39; &R::initR("--silent"); &R::library("RSPerl"); my $tt=&R::call("t.test",

Hi I have R 2.11.1 installed at Fedora 13. when I tried to install RSPerl by command line sudo R CMD INSTALL ~/Download/RSPerl_0.92-1.tar.gz It failed with following errors, could some one offer help? Thanks Yuan Converters.c: In function ?PerlAllocHomogeneousVector?: Converters.c:1003: error: ?elementType? undeclared (first use in this function) Converters.c:1004: error: ?SVt_IV? undeclared

Hello, I am trying to use the "tree" package in R with RSperl. I have generated a regression tree using the "tree" package in R and saved it in a file say "RegTree_2.Rdata" If I use the predict function from R command line, it works fine. However, I want to use it from within perl using RSperl. To do that, here is what I do, my $regTree =

Dear R-helpers, I am running well Perl and R on my Debian Linux, and I tried RSPerl. Installation is ok and all simple functions run well. But I have a problem to call the "lines" function. I would like to draw an histogram with the density curve on. Is is OK in R with the command: >x<-rnorm(1000) >hist(x,prob=T) >lines(density(x)) for example. Now, I have a Perl script

Hi list, For my research, I started using R as a statistics engine, driven by perl scripts that manage my data and computational jobs. I recently upgraded my cluster to Suse 9.2, and obviously wanted to upgrade R to it's latest version, 2.1.1. Installation of R-2.1.1 went flawlessly thanks to the rpm's created by Detlef Steuer (see cran, thanks Detlef). To interface perl and R, two

Hi, I am somewhat new to R and RSPerl, but I think this particular problem has to do with RSPerl and so I am not sure if this is the right forum to ask for help. Nevertheless I am quite sure that many of you would have used RSPerl with R. My hardware platform is a Sun/Solaris V440 server running Solaris 9 operating system I use the gcc-3.4.0 compiler to compile R without any problems. My