Displaying 20 results from an estimated 3000 matches similar to: "Failing to print mer object in an RData image"
2017 Jul 03
2
R memory limits on table(x, y) (and bigtabulate)
I have two character vectors x and y that have the following characteristics:
length(x) # same as
length(y) # 872099
length(unique(x)) # 47740
length(unique(y)) # 52478
I need to crosstabulate them, which would lead to a table with
47740*52478 # 2505299720
cells, which is more than
2^31 # 2147483648
cells, which seems to be R's limit because I am getting the error message
Error in
2009 Jan 13
1
odfWeave: Error in matrixPaste(...)
Hello all,
I try the follow test with an odf file.
*INPUT: teste.odt*
<teste, results=xml>>=
x <- matrix(rnorm(6), nc=2)
xst <- tableStyles(x, useRowNames = TRUE, header = NULL)
odfTable(x, styles=xst, colnames = NULL, useRowNames = TRUE)
@
and I get this error:
*OUTPUT error:*
Error: chunk 1 (label=teste)
Error in matrixPaste(textStart, textName, textEnd, x, tagEnd, sep =
2017 Jul 03
0
R memory limits on table(x, y) (and bigtabulate)
Sorry, don't know enough to give you trustworthy answers, but I can
say that crashes due to (or linked to) packages should usually be
reported to the package maintainer, who can be found by the
?maintainer function. That person may not monitor this list.
Cheers,
Bert
Bert Gunter
"The trouble with having an open mind is that people keep coming along
and sticking things into it."
2010 Jan 18
2
Problem extracting from mer objects
I am having a problem extracting from "mer" objects.
I have constructed my problem using existing datasets.
Using the following commands:
require(lme4)
fm1 <- lmer(Yield ~ 1 + (1 | Batch), Dyestuff)
fixef(fm1)
I get the following error message:
"Error in UseMethod("fixef") : no applicable method for "fixef""
I know that "fixef" is in
2011 Aug 03
0
AICcmodavg functions and 'mer' class models
What is teh reason some functions in the AICcmodavg package do not work with
'mer' class models?
One such example would be the 'importance' function.
Thanks
Ronny
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View this message in context: http://r.789695.n4.nabble.com/AICcmodavg-functions-and-mer-class-models-tp3714534p3714534.html
Sent from the R help mailing list archive at Nabble.com.
2013 Feb 05
1
How to use summary.mer inside a package?
I have a question regarding the build of my project papeR (hosted on
R-forge http://r-forge.r-project.org/R/?group_id=1574) with respect to
lme4.
Both, Windows and MacOS are complaining that lme4 doesn't export summary:
Error : object 'summary' is not exported by 'namespace:lme4'
ERROR: lazy loading failed for package 'papeR'
Linux however builds the project
2010 Dec 31
2
Class "coef.mer" into a data.frame?
Hello,
Could somebody please tell me what am I doing wrong in following?
I try extract coefficients (using arm-package) from the lmer
frunction, but I get the
following warning:
a<-data.frame(coef(res))
Error in as.data.frame.default(x[[i]], optional = TRUE,
stringsAsFactors = stringsAsFactors) :
cannot coerce class "coef.mer" into a data.fram
I think I have done it before
2012 Dec 14
1
Define a custom-built loss function and combine it with nls()
Dear R helpers,
For an allometric analysis (allometric equation y = a*x^b) I would like
to apply a non-linear regression instead of using log-log
transformations of the measured parameters x and y and a Model II linear
regression. Since both of the variables x and y are random, I would like
to apply a Model II non-linear analog of either Reduced Major Axis or
Major Axis Regression.
The
2011 May 17
1
extract value from mer object ?
What is the easiest way to extract a value from a 'mer' object from glmer? The first I need is the
trtpair Std.Dev. which in this case is 0.17542?
I've managed to get the fixed effects numbers from
summary(fednmaout)@coeffs
but no luck with the Random effects stuff.
TIA
Jim
> fednmaout
Linear mixed model fit by REML
Formula: lor ~ as.factor(t2) + as.factor(t3) + (1 |
2007 Jan 14
3
changes in the structure of mer objects?
Dear all,
I try to run the example of lmer and get the following error message.
> library(lme4)
> example(lmer)
lmer> (fm1 <- lmer(Reaction ~ Days + (Days | Subject), sleepstudy))
[[1]]
Error in get(x, envir, mode, inherits) : variable "as.dpoMatrix" was not
found
This error message is similar to what I get with other models. It looks
like the mer class has a slightly
2016 Feb 25
1
Trouble adding a service principal to keytab
Hi,
I am new to samba and Kerberos so please be gentle!
I have built a samba AD DC (v4.3.5) on Centos Linux from source and am
trying to add a service principal and generate a keytab containing the
principal. However the principal entry does not appear in the keytab.
Here's what I did:
[root at bones ~]# samba-tool spn add
GEMSTONE64/bunk.gemtalksystems.com at
2010 Aug 10
6
How to invert a list ?
Dear list,
I have a list, as follows :
a <- 5
names(a) <- "a"
b <- 9
names(b) <- "b"
c <- 15
names(c) <- "c"
x <- list("i" = a, "j" = b, "j" = c)
I want to invert the list, like this :
$a
i
5
$b
j k
9 15
I do not find a clean solution.
Could anyone give me elegant ideas ?
Thanks in advance,
Carlos
2013 Jul 15
8
[PATCH 0 of 7 v5] Introduce the tapback daemon (most of blkback in user-space)
This patch series introduces the tapback daemon, the user space daemon that
acts as a device''s back-end, essentially most of blkback in user space. The
daemon is responsible for coordinating the front-end and tapdisk. It creates
tapdisk process as needed, instructs them to connect to/disconnect from the
shared ring, and manages the state of the back-end.
The shared ring between the
2008 Nov 05
1
R 2.8.0 for Ubuntu Intrepid Ibex i386
Hi all
Is there going to be a binary of R 2.8.0 for Ubuntu Intrepid Ibex i386 -
i.e., not just amd 64bit?
Thx,
RZ
[[alternative HTML version deleted]]
2008 Nov 05
1
R 2.8.0 for Ubuntu Intrepid Ibex i386
Hi all
Is there going to be a binary of R 2.8.0 for Ubuntu Intrepid Ibex i386 -
i.e., not just amd 64bit?
Thx,
RZ
[[alternative HTML version deleted]]
2013 Oct 18
0
pamer.fnc y la nueva versión de R
Gracias a todos por las recomendaciones. Ya me he puesto en contacto con el
autor y le explicado donde esta el error. Es tan fácil como que han
cambiado la estructura de los objetos tipos lmer desde la versión 2.15.3
con lo que su paquete dejo de funcionar. Por suerte la nueva estructura
conserva por lo menos la parte necesaria para hacer sus funciones. Se
localizar el fallo y como arreglarlo, lo
2013 Dec 02
1
pamer.fnc y la nueva versión de R
Hace unos meses os escribir para comunicaros que había un fallo en esta
función. Como os prometí os comento la respuesta por si alguno está
interesado en utilizar el paquete LMERconvenientsfucntions
Dear Javier,
The package has been updated and should work for you fine now. Note that
function mcp.fnc does not return the fourth plot (dffits) anymore. We still
have to figure out a way to compute
2007 Dec 06
1
Solve.QP
Hi there,
I have a major problem (major for me that is) with solve.QP and I'm new at this. You see, to solve my quadratic program I need to have the lagrange multipliers after each iteration. Solve.QP gives me the solution, the unconstrained solution aswell as the optimal value. Does anybody have an idea for how I could extract the multipliers?
Thanx,
Serge
"Beatus qui prodest quibus
2012 May 23
4
Bug#674161: xcp-xapi: 'the device disappeared from xenstore' message during vbd-plug (vm-start)
Package: xcp-xapi
Version: 1.3.2-6
Severity: normal
Tags: upstream
vbd plug to PV domain cause following error:
The server failed to handle your request, due to an internal error. The given message may give details useful for debugging the problem.
message: the device disappeared from xenstore (frontend (domid=4 | kind=vbd | devid=51760); backend (domid=0 | kind=vbd | devid=51760))
(same error
2007 Jan 26
0
R crash with modified lmer code
Hi all,
I've now got a problem with some modified lmer code (function lmer1
pasted at end) - I've made only three changes to the lmer code (marked),
and I'm not really looking for comments on this function, but would like
to know why execution of the following commands that use it almost
invariably (but not quite predictably) leads to the R session
terminating.
Here's the command