similar to: Accessing all the first sub-elements of a list of list

Dear all, Here is my code which am using to combine 5th column from different data sets. Here is the function to do my job genesymbol.append.file <-NULL gene.column <- NULL readGeneSymbol <- function(files,genesymbol.column=5){ for(i in fnames){ temp <- read.table(fnames,header=T,sep="\t",stringsAsFactors=F,quote="\"")

Hi, I have a list of IPI gene IDs. I want to find out whether there is a package which can map the gene ontology to these IPIs, and plot the pie chart to demonstrate the molecular function distributions. The input is like the following gene IPI IDs: IPI:IPI00008860.1|SWISS-PROT:Q9BXJ4-1|TREMBL:Q542Y2|ENSEMBL:ENSP00000231338;EN

I am interested in plotting histograms for the following data Isoform Tumor_65_198 Tumor_50_192 Tumor_80_167 Tumor_80_204 Tumor_95_197 Tumor_70_189 Tumor_90_202 Tumor_40_177 Tumor_60_21 Tumor_70_174 Tumor_70_147 Tumor_50_5 ABCC4-2007 1 1 1 6 1 9 10 1 2 0 10 1 ABCC4-2008 5 8 7 5 3 10 5 5 7 3 10 3 ABCC4-2009 0 0 0 0 0 0 0 0 0 0 0 0 ABCC4-2010

@fsp Please forward to development, manufacturing and quality management department: Model EP1000(PPF6000/100), 431107300095, 4711140480534, Art-Nr. 8296861, 70539, 14Z00000, 35-0200116-01G @nut-users http://www.networkupstools.org/ 2.4.3 debian stable, 2.6.2 upstream, linux 2.6.38-debian-bpo # /usr/local/src/nut-2.6.2/drivers/blazer_usb -u root -DDDDD -a ups Network UPS Tools - Megatec/Q1

Hi, I have the following data frame: > print(mydatframe) __DATAFRAME__ V1 V2 V3 1 1007_s_at DDR1 discoidin domain receptor tyrosine kinase 1 2 1053_at RFC2 replication factor C (activator 1) 2, 40kDa 3 117_at HSPA6 heat shock 70kDa protein 6 (HSP70B') __END__ Is there a way to create a hash with V2 as Key and V3 as its value? - Gundala Viswanath Jakarta - Indonesia

Hi, I have the following data file to be parsed and captured as a data frame: __DATA__ #GDS_ID GENE_NAME GENE_DESCRIPTION GENE_FUNCTION 1007_s_at | DDR1 | discoidin domain receptor tyrosine kinase 1 | protein-coding 1053_at | RFC2 | replication factor C (activator 1) 2, 40kDa | protein-coding 117_at | HSPA6 | heat shock 70kDa protein 6 (HSP70B') | protein-coding __END__ In particular it is

Hi, I've spent the better part of three weeks tracking into this problem. I hope you don't mind a post here on smbfs, but I was hoping someone might have some insight or ideas on where to look next. Summary: trying to rsync folders across an smb mounted share with EXACTLY 50 objects (folder or files), results in the error rsync: readdir(.): Bad file descriptor (9) Details The problem

+Li Jin ----- Original Message ----- > From: "Vadim Rozenfeld" <vrozenfe@redhat.com> > To: "Richard W.M. Jones" <rjones@redhat.com> > Cc: "Roman Kagan" <rkagan@virtuozzo.com>, libguestfs@redhat.com, "Amnon Ilan" <ailan@redhat.com>, "Jeff Nelson" > <jenelson@redhat.com>, "Yan Vugenfirer"

Dear all, I try to conduct a SEM / two stage least squares regression with the following equations: First: X ~ IV1 + IV2 * Y Second: Y ~ a + b X therein, IV1 and IV2 are the two instruments I would like to use. the structure I would like to maintain as the model is derived from economic theory. My problem here is that I have trouble solving the equations to get the reduced form so I can run

Dear all Problem: hist()-function, scale = ?percent? I want to generate histograms for changing underlying data. In order to make them comparable, I want to fix the y-axis (vertical-axis) to, e.g., 0%, 10%, 20%, 30% as well as to fix the spaces, too. So the y-axis in each histogram should be identical. Currently, I have 100 histograms and the y-axis scales changes in each. Here is my code:

----- Original Message ----- > From: "Amnon Ilan" <ailan@redhat.com> > To: "Vadim Rozenfeld" <vrozenfe@redhat.com>, "Li Jin" <lijin@redhat.com> > Cc: "Richard W.M. Jones" <rjones@redhat.com>, "Roman Kagan" <rkagan@virtuozzo.com>, libguestfs@redhat.com, "Jeff > Nelson" <jenelson@redhat.com>,

Hi I am an engineer who is making communication systems. I have a board(made by Kontron ltd, Intel CPU, currently with diskless ) that is used in compactPCI. I boot that board with network PXELINUX method and currently using NFS. But I don't want to use NFS and I want to make and use ram disk image. That means I want to use a ram disk as /. Currently I made a initrd by ltsp_initrd_kit. What

Hi, I''ve just been having a look at the scriptaculous drag-n-drop library, which looks exceedingly good. I''m running across a show-stopper here, though - something that''s cropping up in both the online demos and my own test scripts. If I set up two lists so that I can drag items between them, then if either list becomes empty, I can''t drag elements back into

On Wed, Nov 18, 2015 at 11:31:17PM -0500, Li Jin wrote: > > > > In any case the *.inf files don't seem to have any distinguishing > > > > feature which would allow us to check this. > > > > > > > > Maybe this doesn't matter? > > > > > > Let me explain how it works: > > > We don't make any difference between

I used the multcomp package sometime back for doing multiple comparisons. I see that it has been updated and the methods like simint are no longer supported. When I run the program it prompts to me to use glht. How do I get the lower and upper conf int and the pValues using glht? Does anyone have an example? Thanks ../Murli [[alternative HTML version deleted]]

Hello I have a question. I am an engineer who is making communication systems. I have a board(made by Kontron ltd, Intel CPU, currently with diskless ) that is used in compactPCI. I boot that board with network PXELINUX method and currently using NFS. But I don't want to use NFS. NFS is only needed for getting kernel and initrd. I don't want to use NFS after booting and I want to make

Hi Thomas, Here''s a fix for the problem that I raised this morning, turned out to be fairly simple in the end (after many false starts and thrashing about - thank goodness for Venkman!) First, in Sortable.create(), I register the parent element (the UL tag or whatever), and add an extra property to it to mark it as the parent of the list in question: for (var i = 0; i <

Hallo everybody, I'm wondering whether it might be possible to speed up the following code: Error<-rnorm(10000000, mean=0, sd=0.05) estimate<-(log(1.1)-Error) DCF_korrigiert<-(1/(exp(1/(exp(0.5*(-estimate)^2/(0.05^2))*sqrt(2*pi/(0.05^2))*(1-pnorm(0,((-estimate)/(0.05^2)),sqrt(1/(0.05^2))))))-1)) D<-100000 Delta_ln<-rep(0,D) for(i in 1:D)

I'm on a satellite link, and I've got a caching DNS server set up. Several popular sites have very short DNS cache times set in their SOA records, and I'm trying to over-ride them so that our link isn't swamped with DNS queries. Anybody know how to force the DNS cache to hang onto the info longer than the SOA TTL? Yes, I know the arguments against doing this, but in this

Signed-off-by: Scott Seago <sseago at redhat.com> --- AUTHORS | 17 ++++++ README | 10 +++ conf/ovirt-agent | 12 ++++ conf/ovirt-db-omatic | 12 ++++ conf/ovirt-host-browser | 12 ++++