similar to: graph with 15 combinations

Dear R-helpers, I would like to export hierarchical clusters e.g. fit <- hclust(d, method="ward") in the newick format write(hc2Newick(fit),file='hclust.newick') Searching for a possibility I found this solution in the package ctc (http://www.bioconductor.org/packages/bioc/html/ctc.html). However, neither from this site nor via CRAN it is possible to install the package.

Dear List members, I would like to test whether an observed occupancy of lakes in a landscape has occurred randomly (by chance) or not. How can I do that? The problem is that it concerns only a single species and I would like to use binary data only. At first I thought of generating null models and test the observed occupancy against the randomly generated one. However, this needs more than one

Hi, I would like to ask you how to use Clang in cross-compile environment. My environment is as follows: ------ HOST: 32-bit Fedora 16 with Intel Core i7 gcc/g++ compiler available TARGET: 32-bit mips-typed linux gnu gcc/g++ for 32-bit mips-typed linux available ------ As Clang's option is "-c" in use, my programs are compiled and linked under a host

Konbanwa, Etani san, It might be clang driver issue. Move to cfe-dev. 2012/7/4 ETANI NORIKO <noriko-e at fc.ritsumei.ac.jp>: > I would like to ask you how to use Clang in cross-compile environment. My environment is as follows: > ------ > HOST: 32-bit Fedora 16 with Intel Core i7 > gcc/g++ compiler available > TARGET: 32-bit mips-typed linux > gnu gcc/g++ for

Hello, I have some measurements that I am trying to fit a model to. I also have uncertainties for these measurements. Some of the measurements are not well detected, so I'd like to use a limit instead of the actual measurement. (I am always dealing with upper limits, i.e. left censored data.) I have successfully run survreg using the combination of well detected measurements and limits,

Hi, On Wed, Jul 4, 2012 at 9:21 AM, ETANI NORIKO <noriko-e at fc.ritsumei.ac.jp> wrote: > Please advise me how to change a compiler from a host one to a target one. Suppose MIPS toolchain is installed in the $MIPS folder (i.e. mips-linux-gnu-gcc is in the $MIPS/bin folder). Note, if you want to generate little-endian code and/or 64-bit code, you have to create the following links in the

Greetings I have a bunch of NAs in a column of categorical variables designating the size classes (e.g., smallest to largest: 1,2,3,4) of cave crickets. I'd like to substitute "U" (for unknown) for the NAs. Can anyone give me an idea how to do this? Thanks in advance. Cheers Kurt *************************************************************** Kurt Lewis Helf, Ph.D. Ecologist

Greetings Though I have months in chronological order in my data table, the data were sampled every other month (i.e., February, April, June, August, October, December), every time I try to plot them (on the x-axis) they are plotted in alphabetical order. What am I missing? Cheers Kurt *************************************************************** Kurt Lewis Helf, Ph.D. Ecologist EEO

Greetings Does anyone have any suggestions for reducing pdf file size, particularly pdfs containing photos, without sacrificing quality? Thanks for any tips in advance. Cheers Kurt *************************************************************** Kurt Lewis Helf, Ph.D. Ecologist EEO Counselor National Park Service Cumberland Piedmont Network P.O. Box 8 Mammoth Cave, KY 42259 Ph: 270-758-2163

Greetings Using the following command I've been trying to subset a dataframe of counts of an organism to compute the sizes of groups for use as a predictor: Hs.patches <- as.data.frame(with(Hs.long, table(Cave,Year,Month,Region,Plot,))) I am getting the following error message that I do not understand: ERROR: argument is missing, with no default Can anyone shed light on this

Greetings I want to remove numbers from a string of characters that identify sites so that I can merge two data frames. For example, a site in one frame is called "001a Frozen Niagara Entrance" whereas the same site in the other data frame is called "Frozen Niagara Entrance". It seems to me the easiest thing to do would be to remove the numbers from the first data

All Is there a script in R equivalent to the "if then" transforms one can perform in Systat? For example, I want to create a "Treatment" column coded either 1 or 2 for twelve field sites in a large data set. Ideally, I'd be able to tell R to code sites a-f as 1 and sites g-l as 2. Cheers Kurt *************************************************************** Kurt Lewis

Hi folks, I''m curious how a lookup with a large group of values would be handled in Rails. For example, I have a (contrived) AnimalType filtering a list of many Animals--more than can be presented comfortably in a dropdown box. Therefore I need to either redirect to another screen to select an animal (returning after the selection is made), or show a dialog--modal or otherwise--to

https://bugzilla.samba.org/show_bug.cgi?id=8565 Summary: rsync hangs when using --only-write-batch and --hard-links Product: rsync Version: 3.1.0 Platform: x64 OS/Version: Linux Status: NEW Severity: normal Priority: P5 Component: core AssignedTo: wayned at samba.org

Hi, I?ve installed wine on Ubuntu 6.10 64bit using the following guide : http://www.ubuntuforums.org/showthread.php?t=185557 but, when I type winecfg in Terminal I get the following error : exec: 29: /usr/bin/wine: not found Dunno if it may help, but here?s a terminal shot of when wine was getting installed. matt@ubuntu:~/Desktop$ dpkg -x lib libartsc0_1.3.2-3_amd64.deb

Dir Sirs/Madams, How do you do! Please allow me introduce myself. My name is Yang Wenqing, I am from POLY high-technology company. My company focuses on technology support service and software promotion application for Linux software. We have army background. I used to promote TurboLinux software in SI in 2000. After that, I worked in LessonMaster Software Company for promotion Red Hat Linux

Hi list, I'm hoping to find a way via php, preferably without using exec() or system(), to reliably identify an ogg vorbis file via php. Using $fi = new finfo(FILEINFO_MIME); $mime_type = $fi->buffer(file_get_contents($upload)); results in 'application/ogg' My site accepts vouchers for herpetology records, but only image and audio. I do not wish to support video vouchers, but

Hi - I'm running CentOS, which means many of the support libraries are a bit on the stale side. I have occasional need to transcode to theora - but it seems the transcode program, which I have managed to successfully install, does not have theora as an output option. It seems I have to use a program called ffmpeg2theora which I just can not get to build on CentOS - I'm guessing

https://bugzilla.samba.org/show_bug.cgi?id=8804 Summary: rsync -aH --only-write-batch hangs Product: rsync Version: 3.0.9 Platform: x64 OS/Version: Linux Status: NEW Severity: normal Priority: P5 Component: core AssignedTo: wayned at samba.org ReportedBy: christian.heinlein at htw-aalen.de

?Dear All I have some data expressed in geometric means and 95% confidence intervals. Can I code them in metafor as: rma(m1i=geometric mean 1, m2i=geometric mean 2, sd1i=geometric mean 1 CI /3.92, sd2i=geometric mean 2 CI/3.92.......etc, measure="MD") All of the studies use geometric means. Thanks! Edward ---------------------------- [[alternative HTML version deleted]]