similar to: Sweave: Changing the background color, adding a border

Hi list, I was using Sweave and was wondering if anyone has had any luck changing the font colors of the code chunks. For instance, in my .Rnw preample I tried including: === \usepackage[usenames]{colors} \definecolor{darkred}{rgb}{0.545,0,0} \definecolor{midnightblue}{rgb}{0.098,0.098,0.439} \DefineVerbatimEnvironment{Sinput}{Verbatim}{fontshape=sl,formatcom={\color{midnightblue}}}

I am trying to transition from Sweave to knitr, but there are a few things about customization of the appearence of R input and output that I did not get yet. Maybe somebody on the list can help me. In my Sweave presentations I used a slanted font for the R input and a normal font for the output, both in a small font. I also indented everything by an extra 2em. All this was achieved by the

Hi the list, I am using Sweave. Between the Sinput and the Soutput, there is always an extra line: > 2+2 [1] 4 Is it possible to remove it ? > 2+2 [1] 4 Thanks Christophe

I find Sweave very useful and I was trying to combine it with the latex package fancyvrb. I was trying to get line numbering and labels in order to reference the lines where particular commands occur. Unfortunately, I haven't been able to figure out how to do it. Maybe somebody can help me. The following is a sample Rnw file: the first part shows what I would like to get, the second what I

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Hi! I am currently using Sweave for writing my bachelor thesis - and I have a problem: I am using a LaTeX style (report) with quite big margin spaces. The Sweave generated LaTeX code "floats" into the margin - and it looks ugly. The text is blocked and fine... then there comes some flattering code running over the margin... and blocked text again. Considering the LaTeX output, I guess

Hello Folks, When I run the document below through sweave, rgui.exe/rsession.exe leaves a file handle open to the sweave-001.pdf graphic (as verified by process explorer). Pdflatex.exe then crashes (with a Permission Denied error) because the graphic file is locked. This only seems to happen when there is an error in the sweave document. When there are no errors, no file handles are left open.

Hi all, I've got a basic question regarding package documentation and rd.sty. I wrote my first own package, and now I would like to place the documentation into the appendix of another LaTex document. Seemingly I cannot simply \usepackage{Rd}, as this will modify the page-settings of my document. Is there a minimum style file which will just define the environments and commands needed for

In an Sweave slide, I want to use sem::read.moments() and sem::specify.model(), which work by using scan() to read the following lines, up to the first blank line. However, Sweave throws an error: > Sweave("sem-thurstone.Rnw") Writing to file sem-thurstone.tex Processing code chunks ... 1 : term hide (label=arrests-setup) 2 : echo term hide (label=thurstone-data) Error:

I'm posting this for two reasons: one is to see if anyone has a better way of solving the problem or suggestions for improving my existing approach; and the other is to show what I'm currently doing in case anyone else might find it useful. The background is that I've been using Sweave for several years now to produce class notes, and I sometimes include quite a lot of raw R input and

Hola a todos. Estoy utilizando Sweave para integrar mis análisis en documentos de latex. Alguien sabe como cambiar el tamaño de letra por defecto para el código y las salidas de R. Supongo que será especificando algo en el preámbulo, pero no sé como. Gracias. [[alternative HTML version deleted]]

nchar(with(list(2),ls())) gives an internal error. This is of course a peculiar call (no names in the list), but the error is not caught cleanly. It is not clear from the documentation whether with(list(2)...) is allowable; if it is not, it should presumably give an error. If it is, then ls shouldn't have problems with the resulting environment. > qq <- with(list(2),ls())

Hi, I would like to be able to create new environments from package C code. AFAICT, this isn't allowed since both NewEnvironment and R_NewHashedEnv are declared in Defn.R. If exposing this isn't controvertial, I would submit a patch. However, I'm not sure where the declarations should go (Rdefines.h?) and whether they need to change to Rf_*. + seth

Hi, as Seth Falcon in 2006, I also need to create new environments from package C code. Unfortunately, both NewEnvironment and R_NewHashedEnv are not yet part of the public API, if I understand correctly. Is it planned to add at least one of these functions to the public API in the near future? May I submit a patch? Otherwise I would need to re-implement much of the functionality of R

Dear Colleagues: In an attempt to have things like # See page \pageref{this} inside comments in R code chunks I have modified Sweave.sty as below. I have followed fancyvrb's manual with regard to the use of the commandchars argument. But when compiling with LaTeX (using attached test file) I get a LaTeX error (/usr/share/texmf-texlive/tex/latex/ae/t1aett.fd) ! Missing \endcsname

Is there an elegant way to get Sweave to center graphics by default? I'd like to use \centerline{\includegraphics{}} etc. to save some vertical space that \begin{center} ... \end{center} uses, and I'd like to avoid centering with each <<fig=T>>= Thanks Frank -- Frank E Harrell Jr Professor and Chair School of Medicine Department of

I have data that looks like this: > df1 group id 1 red A 2 red B 3 red C 4 blue D 5 blue E 6 blue F I want a list of the groups containing vectors with the ids. I am avoiding subset(), as it is only recommended for interactive use. Here's what I have so far: df1 <- data.frame(group=c("red", "red", "red", "blue",

The newest version of R for Unix (version 0.50 alpha-1) is now (or will soon be) available from the following sites. NORTH AMERICA: http://lib.stat.cmu.edu/R/Alpha EUROPE: ftp://ftp.stat.math.ethz.ch/R/ ftp://statlab.uni-heidelberg.de/pub/mirrors/auckland/R/ JAPAN: ftp://ftp.u-aizu.ac.jp/pub/lang/R/ NEW ZEALAND: ftp://stat.auckland.ac.nz/pub/R/

I'm sorry for having to post this, but I can't seem to find any solutions to this, which seems pretty simple, but then again... I've started playing with the example r news project and wanted to start adding some graphs, but replacing: \begin{figure} \vspace*{.1in} \framebox[\textwidth]{\hfill \raisebox{-.45in}{\rule{0in}{1in}} A graph goes here \hfill}

On Sun, Nov 1, 2009 at 6:02 AM, Peter Dalgaard <p.dalgaard at biostat.ku.dk> w= rote: > macrakis at alum.mit.edu wrote: >> >> nchar(with(list(2),ls())) gives an internal error. This is of course >> a peculiar call (no names in the list), but the error is not caught >> cleanly. >> >> It is not clear from the documentation whether with(list(2)...) is