Displaying 20 results from an estimated 1000 matches similar to: "Interesting Plot"
2007 Nov 03
1
mantel tests
This is a general statistics question so I'm sorry if its outside the field of r help.
Anyway, I have a suite of female and male traits and I have made a matrix of correlation coefficients using rcorr(). This results in a 6 by 6 matrix like this..
[1] 0.11287990 0.20441361 0.23837442 0.04713234 0.04331637 0.01461611
[7] 0.22627981 0.11720108 0.14252307 0.19531625 0.29989953 0.09989502
2009 Mar 10
5
2 Simple Lattice Plot Questions
Hi,
I have created the plot below and have a few questions about changes.
1) How do I change the "Year" title of each plot so it reads from the top
"2006","2007","2008","2009".
2) How do I get rid of those vertical grey bars in the title bar of each
plot?
I apologise for my ignorance... one of those days :(
James
2009 Mar 22
5
If statement generates two outputs
Hi,
How do I tell an if statement to generate two seperate outputs.
E.g If X>5 I want to create df1 and df2:
if (X>5) {df1<-c(4,5,6,7,8) AND df2<-c(9,10,11,12,13)}
Thanks,
James
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2009 Jan 14
1
Help with Plot/Legend
Dear R-Users
I have 2 questions:
Firstly, If I create a matplot and legend for multiple vectors and then tag
another vector on using matlines (e.g. a 'total' of all vectors), is there
anyway to add the new line to the legend without recreating it? I have
created the plot this way because I would like to define the lty and lwd for
the 'total' vector so that it can be
2007 Apr 01
4
Abundance data ordination in R
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2009 Jan 07
2
Plotting a graph for every Level of a Factor
Hello,
I'm sorry if this seems similar to my last post but I thought it was
significantly different to warrent a new thread. Using the dataset below,
is there a way to generate a bar/line plot for the TACC/Catch of every lvl
of stock? i.e. OR1,OR3,OR5. The picture at the bottom of this post is an
example of the bar/line plot for OR1 which was generated when OR1 was the
only stock in the
2009 Oct 05
2
Loop function/comparison operator problem
Hi There,
I have created the following function
format<- function(){
repeat {
form<-readline(paste("\nIn what format do you want to save these
plots?\nChoose from: wmf, emf, png, jpg, jpeg, bmp, tif, tiff, ps, eps, or
pdf.\nNote: eps is the suggested format for publication quality plots.\nPlot
format --> "));
cat("\nI'm sorry, I don't know what that format
2009 Jul 27
2
Split rownames into factors
Hi Guys,
I was wondering how you would go about solving the following problem:
I have a list where the grouping information is in the row names.
Rowname [,1]
X1Jan08 324
X1Jun08 65
X1Dec08 543
X2Jan08 23
X2Jun08 54
X2Dec08 8765
X3Jan08 213
X3Jun08 43
X3Dec08 65
How can I create the following dataframe:
Value Date Group
[1,] 324 Jan 08 X1
[2,] 65 Jun 08
2009 Oct 01
2
Re gression for levels of a factor/xyplot type="r"
Hi,
I'm sure these are basic problems so I apologise in advance for my
ignorance. I have a dataset with X, Y, and a Factor with 4 levels. I am
trying to figure out how to use lm() to find the r2 value, slope and
intercept of an X~Y regression, for each level of the Factor. Is there a
way to do this automatically without having to specify different subsets of
the factor?
my code so far:
2009 Jan 15
1
Zoo Plot Can't Get Rid of Box
Hi,
I apologise for the stupid question but how to you get rid of the box around
a plot in the package zoo? I can't seem to find an equivalent for bty="l"
i.e. just x and y axis.
Cheers
James
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2009 Apr 14
1
Lattice xyplot: Line and Rectangle in legend.
Hello fellow R users,
I have a problem. I have created a barchart overlayed by an xyplot line,
both of which read off the same Y axis. The problem comes when I try to
generate a key. It seems that I can only create either two lines, or two
rectangles. I would much prefer to have the barchat series depicted by a
rectangle, and the xyplot series by a line. Is there a way to do this?
Your help
2008 Jan 18
1
residuals from pcaiv
Dear R users,
How can I extract the residuals from a pcaiv/rda in ade4?
In Vegan there is the
residuals()
function, giving the approximation of the original data from the
unconstrained ordination
Is there something similar in ade4?
Nikos
2009 Nov 06
3
Calculate Mean for each Treatment/Trial Interaction in DF
Hi,
I am create a new DF that summarizes the mean angle per treatment/trial, of
the original DF (see below). I have had some success using:
(tapply(df$Angle, INDEX=interaction(df$State,
df$Trial), FUN=mean)); however, this gives the answer as a list, which
means I would have to split the name to get the categories back. Does
anyone know a simple way to transform the Original DF into Summary
2009 Oct 12
1
Binding objects with a similar name
Dear R users,
The code below splits a dataset by "target_species" and then further splits
each target species group by year. Finally the sum of a variable called
"total_hook_num" is calculated and then assigned a name based on
(paste(a$target_species[1],a$year[1],sep="").
newsplit<-split(newdataset,list(newdataset$target_species))
for(i in newsplit){
2009 Mar 06
3
PCA and categorical data
Hi all,
I' m trying to figure out if it is appropriate to do a PCA having only categorical data (not ordinal). I have only find the following quote:
One method to find such relationships is to select appropriate variables and
to view the data using a method like Principle Components Analysis (PCA) [4].
This approach gives us a clear picture of the data using KL-plot of the PCA.
However, the
2006 Jul 20
3
Correspondence analysis with R
Hello everybody,
i'm having some trouble performing correspondence analysis with R for Mac OS
X. Does anyone know about some useful package?
And also, if i had found coordinates of points representing row and column
profiles, how do i put them in a single figure with labels identifying each
one of them?
This thing is getting me almost crazy...
Thank you in advance for answering,
bye
2004 Nov 16
5
Difference between two correlation matrices
Hi
Now a more theoretical question. I have two correlation matrices - one
of a set of variables under a particular condition, the other of the
same set of variables under a different condition. Is there a
statistical test I can use to see if these correlation matrices are
"different"?
Thanks
Mick
2004 May 13
2
BIO-ENV procedure
I've been unable to find a R package that provides the means of
performing Clarke & Ainsworth's BIO-ENV procedure or something
comparable. Briefly, they describe a method for comparing two separate
sample ordinations, one from species data and the second from
environmental data. The analysis includes selection of the 'best'
subset of environmental variables for explaining
2008 Jun 05
3
How to combine to PCAs
Dear all:
Subjects were measured two times (t1 and t2) on different variables (v1 ... vn).
Between t1 and t2 there was an experimental manipulation. I computed two PCAs for time-points t1 and t2.
Is it possible to combine both PCAs in order to get only one set of eigenvectors? Due to the experimental manipulation measurement values on time points t1 and t2 changed for each subject.
Many
2005 Apr 21
4
basic question
I know this question is very simple, but I am not figure it out
I have the data frame:
test<- data.frame(year=c(2000,2000,2001,2001),x=c(54,41,90,15), y=c(29,2,92,22), z=c(26,68,46,51))
test
year x y z
1 2000 54 29 26
2 2000 41 2 68
3 2001 90 92 46
4 2001 15 22 51
I want to sum the vectors x, y and z within each year (2000