similar to: barplot2 x-axis

I'm using barplot2 to plot some data. Is there any way to determine the width of the bars in the generated plot? I know that barplot2 returns a list of the coordinates of the center of each bar, but since there is some white space between each bar, I don't know how to get the width of each bar. Jamie

Hi list, I'm using barplot2 form the gplots package to plot a few numbers (I want to add SD bars later). However, I would like the y-axis not to start from 0 but 500. When I add the parameters YLIM, something goes wrong. The graph is not 'cut off' at 500. Instead the bars seems to sink trough the bottom of the graph. Because its a little hard to explain, here is a self-containing

Hello, I get a nice looking barplot using the barplot2 function in the gregmisc package: body2 <- barplot2(hh3, beside = TRUE, col = c("mistyrose", "lightcyan"), .... cex.names = 1.0, plot.ci = TRUE, ci.l = cil, ci.u = ciu, plot.grid = TRUE) box() However, obviously I lose the collors when converting from ps to a pdf (outside of R)

Dear R users, I have what I think it is a very simple question concerning plots in R. If you could help me I would be very grateful. How can I include a legend in my plot? Below I give an example of my data and the code I am using. What I wish to accomplish is a legend saying that the black line refers to "A", the red to "B" and the blue to "C". Any suggestions?

Dear All, I have the following data coming out from s <- with(final, summarize(norm, llist(gtt,fdiab), function(norm) { n <- sum(!is.na(norm)) s <- sum(norm, na.rm=T) binconf(s, n) }, type='matrix') ) ie gtt fdiab norm.norm norm.norm2 norm.norm3 18

Hi R-users, I inted to make multiple plots using for loop. The question is how can I adjust the left hand side margin of the plot according to the names.arg argument in barplot2. In every plot I have different annotations in the y axis and they vary in length. Now when I have fixed margins opar <- par(mar=c(3,15,0,2)... I get the same margins in all of the plots. That leaves lots of white

Hello, I try to handle a simple bar-plot, but it turns out to be not as simple as I thought. 1) I have created a .dat-File, e.g. test.dat: DATA DATA-SEM 2.2 0.32 6.2 1.30 12.7 1.61 48.6 3.08 4.1 0.86 4.5 0.32 1.5 1.13 1.2 1.08 The first row is the data represented by bars. The second row deals with the Standard Error of Mean. The lines correspond to time-intervals of experiments. 2) I now

R-Users, I am working with gplots (in gregmisc bundle) plotting some posterior probabilities (using barplot2) of harvest bag limits for discrete data (x-axis from 0 to 12, data is counts) and I ran into a couple of questions whose solutions have evaded me. 1) When I create and include the confidence intervals, the lower bound of the confidence intervals for several of the posterior probabilities

Hello, I would like to know if it's possible to modify the name of groups of bar because on my barplot2, I have 5 groups of bars and one of them is called "User Contributes" and when I save the plot "User contributes" is to big so I don't have it on my plot! Is it pssible to put the name vertically! Thanks! Sabine --------------------------------- ils, photos

Full_Name: Marketa Kylouskova Version: 1.2.1 OS: Windows Submission from: (NULL) (147.231.7.2) Hi, I believe there is a bug in the extension of wilcox.test, namely in determination of confidence intervals. I concentrated on the two-sample test only. I examined and tested its performance on this working data set: x<-rnorm(10,3,1) # So I have two samples, I will test whether

Dear R-helper, I wonder if anyone can help me. I am trying to convert a dataset to a format recognizable by a software onboard a research vessel but I am having problems with some steps. I have a data frame as follows: Conc Lat Lon Depth Point0000 56.25 -5.65 70 Point0001 56.55 -5.35 85 Point0002 56.25 -5.65 65 Point0003 56.37

Hi All, I'd like to see the function code behind the barplots2() function in the gplots package, however i come across a bit of a stumbling block of a hidden function, can anyone help? > library(gplots) > methods(barplot2) [1] barplot2.default* Non-visible functions are asterisked > barplot2 function (height, ...) UseMethod("barplot2") <environment:

Hi, I am new to R. Anyone can explain the following from R-help or anyone can direct me how to calculate odds ratio from logistic model in R. Thank you very much. Guoya Stefano <stecalza at tiscalinet.it <https://stat.ethz.ch/mailman/listinfo/r-help> > writes: >Hi all. > >A simple question. >Is there a function to compute the Odds Ratio and its confidence intervall,

Dear R Users, (and dear Marc) First of all many thanks for the answers to my previous questions. I would like to barplot the mean percent change of a variate with it's CI. Bars should start from the zero reference line to height (in barplot2). Is there a way to tweak barplot2, for example, to do that ? I have tried to see what the function was but unlike other functions was not able to

Dear R users, I have a very simple problem but I can't find the function in R to deal with it. I need to split (or decompose) one line into many lines using one field as a reference. I have a table with the following format: A B Frequency 23 3 2 24 2 5 25 1 3 And need to split each line into several lines according to the frequency to achieve something like this: A B

Dear R users, I need to find the coordinates for the point (midpoint) located half way between two pairs of coordinates (lon1,lat1 and lon2,lat2) assuming a straight line between them. What would be the best way? I tried to find an answer in the help archives but without success. I would greatly appreciate any help. df<- data.frame(lon1=c(-4.568,-4.3980), lat1=c(59.235,56.369),

R 2.4.0 for Windows The following plot appears as a squared window (as all r-plots) Not all subtitles are visible, but all subtitle will appear, when changing the aspect ratio of the plot window with the mouse to a wide format. But does not work when using the save as postscript menu item from the plot window. is there any solution for that? opar <- par(mfrow = c(2,2), oma = c(0, 0, 1.1,

Dear all, I am still a R apprentice... Apologies for the basic question. I am trying to reshape a dataframe based on the order of two variables (a character variable and a numerical variable). To simplify it, consider the following dataframe > df<-data.frame(id=c("b","b","a","a","a"),ord=c(2,1,1,3,2)) id ord 1 b 2 2 b 1 3 a 1 4

Dear all, I have a four variable: Stuy.Name, OR, 95%LCI and 95%UCI and I would like to create a meta analysis plot. I can't use meta.MH function in metaplot because I do not have n.trt, n.ctrl, col.trt, col.ctrl are not available! Is there an alternative way to do it? Many thanks in advance, Cheba [[alternative HTML version deleted]]

I am making a barplot using barplot2 from gplots where each bar represents a specific tree species. I have formatted the species names on the x-axis so that the genus name is above the species name and have then rotated the labels 45 degrees to save room. This is my code: >columncolor<-c("grey20", "grey20", "grey20", "grey70",