[R] How to create gridded data

David L Carlson
Thu, 15 Nov 2018 14:57:47 -0000

It would depend on the format of the gridded data. Assuming it is a data frame
like DF2 in my earlier answer, you just reverse the steps:

> DF2
     110.5 111 111.5 112
46     6.1 4.5   7.8 5.5
45.5   3.2 5.0   1.8 2.0

> DF3 <- data.frame(as.table(as.matrix(DF2)))
  Var1  Var2 Freq
1   46 110.5  6.1
2 45.5 110.5  3.2
3   46   111  4.5
4 45.5   111  5.0
5   46 111.5  7.8
6 45.5 111.5  1.8
7   46   112  5.5
8 45.5   112  2.0

But the latitude and longitude get converted to factors and we lose the column
names:

> DF3 <- data.frame(as.table(as.matrix(DF2)))
> colnames(DF3) <- c("latitude", "longitude",
"Precip")
> DF3$latitude <- as.numeric(as.character(DF3$latitude))
> DF3$longitude <- as.numeric(as.character(DF3$longitude))

----------------------------------------
David L Carlson
Department of Anthropology
Texas A&M University
College Station, TX 77843-4352

From: lily li <chocold12 at gmail.com>
Sent: Tuesday, November 13, 2018 10:50 PM
To: David L Carlson <dcarlson at tamu.edu>
Cc: Sarah Goslee <sarah.goslee at gmail.com>; R mailing list <r-help at
r-project.org>
Subject: Re: [R] How to create gridded data

Thanks, Sarah's answer helps the question. Now how to change the gridded
data back to DF1 format? I don't know how to name the format, thanks.

On Tue, Nov 13, 2018 at 10:56 PM David L Carlson <mailto:dcarlson at
tamu.edu> wrote:
Sarah's answer is probably better depending on what you want to do with the
resulting data, but here's a way to go from your original DF1 to DF2:

> DF1 <- structure(list(latitude = c(45.5, 45.5, 45.5, 45.5, 46, 46, 46,
+? ? ? ? ?46), longitude = c(110.5, 111, 111.5, 112, 110.5, 111, 111.5,
+? ? ? ? ?112), Precip = c(3.2, 5, 1.8, 2, 6.1, 4.5, 7.8, 5.5)),
+? ? ? ? ?class = "data.frame", row.names = c(NA,
-8L))
>
# Convert to table with xtabs()
> DF2 <- xtabs(Precip~latitude+longitude, DF1)
>

# Reverse the order of the latitudes
> DF2 <- DF2[rev(rownames(DF2)), ]
> DF2
? ? ? ? longitude
latitude 110.5 111 111.5 112
? ? 46? ? ?6.1 4.5? ?7.8 5.5
? ? 45.5? ?3.2 5.0? ?1.8 2.0

# Convert to a data frame
> DF2 <- as.data.frame.matrix(DF2)
> DF2
? ? ?110.5 111 111.5 112
46? ? ?6.1 4.5? ?7.8 5.5
45.5? ?3.2 5.0? ?1.8 2.0

----------------------------------------
David L Carlson
Department of Anthropology
Texas A&M University
College Station, TX 77843-4352


-----Original Message-----
From: R-help <mailto:r-help-bounces at r-project.org> On Behalf Of Sarah
Goslee
Sent: Tuesday, November 13, 2018 8:16 AM
To: lily li <mailto:chocold12 at gmail.com>
Cc: r-help <mailto:r-help at r-project.org>
Subject: Re: [R] How to create gridded data

If you want an actual spatial dataset, the best place to ask is R-sig-geo

R has substantial capabilities for dealing with gridded spatial data,
including in the sp, raster, and sf packages.

Here's one approach, creating a SpatialGridDataFrame, which can be
exported in any standard raster format using the rgdal package.

DF2 <- DF1
coordinates(DF2) <- ~longitude + latitude
gridded(DF2) <- TRUE
fullgrid(DF2) <- TRUE

I recommend Roger Bivand's excellent book:
https://urldefense.proofpoint.com/v2/url?u=https-3A__www.springer.com_us_book_9781461476177&d=DwMFaQ&c=ODFT-G5SujMiGrKuoJJjVg&r=veMGHMCNZShld-KX-bIj4jRE_tP9ojUvB_Lqp0ieSdk&m=vZqNKoDe8N1TzBzeK12g2oa0cBS8VD6NDCs-hUhvt5o&s=B73PwZQrdKUmM1ML2Y5zjaEz7xqkHlzBDCrhluogK2U&e
and there are abundant web tutorials.

Sarah
On Tue, Nov 13, 2018 at 2:22 AM lily li <mailto:chocold12 at gmail.com>
wrote:
>
> Hi R users,
>
> I have a question about manipulating data. For example, I have DF1 as the
> following, how to transform it to a gridded dataset DF2? In DF2, each value
> Precip is an attribute of the corresponding grid cell. So DF2 is like a
> spatial surface, and can be imported to ArcGIS. Thanks for your help.
>
> DF1
> latitude? ?longitude? ?Precip
> 45.5? ? ? ? ? ?110.5? ? ? ? ?3.2
> 45.5? ? ? ? ? ?111? ? ? ? ? ? 5.0
> 45.5? ? ? ? ? ?111.5? ? ? ? ?1.8
> 45.5? ? ? ? ? ?112? ? ? ? ? ? 2.0
> 46? ? ? ? ? ? ? 110.5? ? ? ? ?6.1
> 46? ? ? ? ? ? ? 111? ? ? ? ? ? 4.5
> 46? ? ? ? ? ? ? 111.5? ? ? ? ?7.8
> 46? ? ? ? ? ? ? 112? ? ? ? ? ? 5.5
> ...
>
>
> DF2
> 6.1? ?4.5? ?7.8? ?5.5
> 3.2? ?5.0? ?1.8? ?2.0
> ...
>


--
Sarah Goslee (she/her)
https://urldefense.proofpoint.com/v2/url?u=http-3A__www.numberwright.com&d=DwMFaQ&c=ODFT-G5SujMiGrKuoJJjVg&r=veMGHMCNZShld-KX-bIj4jRE_tP9ojUvB_Lqp0ieSdk&m=vZqNKoDe8N1TzBzeK12g2oa0cBS8VD6NDCs-hUhvt5o&s=qSosThG59aeSFYzVFf1e-YQGbuBKVbvgVi1z9nFm884&e
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