[R] Problems installing mice package

David Winsemius
Wed, 15 Nov 2017 17:49:55 -0000

> On Nov 15, 2017, at 1:08 AM, Jeremie Juste <jeremiejuste at
gmail.com> wrote:
>
>
>
> Hello,
>
> I tried intalling mice package and got the following error:
>
> * installing *source* package ?mice? ...
> ** package ?mice? successfully unpacked and MD5 sums checked
> ** libs
> g++  -I/usr/local/lib/R/include -DNDEBUG
-I"/home/djj/R/x86_64-pc-linux-gnu-library/3.4/Rcpp/include"
-I/usr/local/include   -fpic  -g -O2  -c RcppExports.cpp -o RcppExports.o
> g++  -I/usr/local/lib/R/include -DNDEBUG
-I"/home/djj/R/x86_64-pc-linux-gnu-library/3.4/Rcpp/include"
-I/usr/local/include   -fpic  -g -O2  -c match.cpp -o match.o
> g++ -shared -L/usr/local/lib -o mice.so RcppExports.o match.o Welcome to R!
Goodbye!

Somehow you have sent an R "welcome message" to the installer script.
What was the action that started all this? Were you in an R session or was this
something done from a bash console?

> g++: error: Welcome: No such file or directory
> g++: error: to: No such file or directory
> g++: error: R!: No such file or directory
> g++: error: Goodbye!: No such file or directory
> /usr/local/lib/R/share/make/shlib.mk:6: recipe for target 'mice.so'
failed
> make: *** [mice.so] Error 1
> ERROR: compilation failed for package ?mice?
> * removing ?/home/djj/R/x86_64-pc-linux-gnu-library/3.4/mice?
>
> The downloaded source packages are in
> 	?/tmp/Rtmpgam70t/downloaded_packages?
> Error in library(mice) : there is no package called ?mice?
> In addition: Warning message:
> In  :

That's a rather strange method for invoking install.packages. Usually it
would be just:

install.packages("mice", repos =
"http://cran.us.r-project.org")



Your best venue for linux installation questions is probably:

https://stat.ethz.ch/mailman/listinfo/r-sig-db


>  installation of package ?mice? had non-zero exit status
>
> I'm unable to resolve it. Any help please?
>
> Best regards,
>
> Jeremie
>
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David Winsemius
Alameda, CA, USA

'Any technology distinguishable from magic is insufficiently advanced.'
-Gehm's Corollary to Clarke's Third Law