I am very new to Linux so I probably am doing something stupid but I cannot seem to update to R 2.15 Using Ubuntu 12.02 Precise Penguin I realise that debian packages are not updated regularly so I tried to follow the insructions at the R-site So far, I have modified /etc/apt/sources.list to read ## R CRAN added 2012-06-12 deb http://probability.ca/cran/bin/linux/debian squeeze-cran/ Issued command: sudo apt-get update RESULT W: GPG error: http://probability.ca squeeze-cran/ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 06F90DE5381BA480 Ubuntu seems to have happily run through all the other updates with no problem Any suggestions? Thanks John Kane Kingston ON Canada sessionInfo() R version 2.14.1 (2011-12-22) Platform: i686-pc-linux-gnu (32-bit) locale: [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C [3] LC_TIME=en_CA.UTF-8 LC_COLLATE=en_US.UTF-8 [5] LC_MONETARY=en_CA.UTF-8 LC_MESSAGES=en_US.UTF-8 [7] LC_PAPER=C LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C [11] LC_MEASUREMENT=en_CA.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base ____________________________________________________________ GET FREE SMILEYS FOR YOUR IM & EMAIL - Learn more at http://www.inbox.com/smileys Works with AIM?, MSN? Messenger, Yahoo!? Messenger, ICQ?, Google Talk? and most webmails
Nordlund, Dan (DSHS/RDA)
2012-Jun-12 16:02 UTC
[R] Attempting to update from R 2.14 to 2.15
See if the SECURE APT section of the following link helps. http://cran.r-project.org/bin/linux/ubuntu/README Dan Daniel J. Nordlund Washington State Department of Social and Health Services Planning, Performance, and Accountability Research and Data Analysis Division Olympia, WA 98504-5204> -----Original Message----- > From: r-help-bounces at r-project.org [mailto:r-help-bounces at r- > project.org] On Behalf Of John Kane > Sent: Tuesday, June 12, 2012 8:46 AM > To: r-help at r-project.org > Subject: [R] Attempting to update from R 2.14 to 2.15 > > I am very new to Linux so I probably am doing something stupid but I > cannot seem to update to R 2.15 > > Using Ubuntu 12.02 Precise Penguin > > I realise that debian packages are not updated regularly so I tried to > follow the insructions at the R-site > > So far, I have modified /etc/apt/sources.list to read > > ## R CRAN added 2012-06-12 > deb http://probability.ca/cran/bin/linux/debian squeeze-cran/ > > Issued command: sudo apt-get update > > RESULT > W: GPG error: http://probability.ca squeeze-cran/ Release: The > following signatures couldn't be verified because the public key is not > available: NO_PUBKEY 06F90DE5381BA480 > > Ubuntu seems to have happily run through all the other updates with no > problem > Any suggestions? > > Thanks > John Kane > Kingston ON Canada > > sessionInfo() > R version 2.14.1 (2011-12-22) > Platform: i686-pc-linux-gnu (32-bit) > > locale: > [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C > [3] LC_TIME=en_CA.UTF-8 LC_COLLATE=en_US.UTF-8 > [5] LC_MONETARY=en_CA.UTF-8 LC_MESSAGES=en_US.UTF-8 > [7] LC_PAPER=C LC_NAME=C > [9] LC_ADDRESS=C LC_TELEPHONE=C > [11] LC_MEASUREMENT=en_CA.UTF-8 LC_IDENTIFICATION=C > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > ____________________________________________________________ > GET FREE SMILEYS FOR YOUR IM & EMAIL - Learn more at > http://www.inbox.com/smileys > Works with AIM?, MSN? Messenger, Yahoo!? Messenger, ICQ?, Google Talk? > and most webmails > > ______________________________________________ > R-help at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting- > guide.html > and provide commented, minimal, self-contained, reproducible code.
HI, Maybe this link will be useful. (http://ubuntuforums.org/showthread.php?p=11876430). I also updated to R2.15 from 2.14 in Ubuntu 11.10 (Now I upgraded to 12.04, so the update command is disabled).? I added one line in /etc/apt/sources.list ? deb http://cran.mtu.edu/bin/linux/ubuntu oneiric/.? Similar type of code is there in the link. Hopefully, it works for you. Now, that I upgraded to Ubuntu 12.02, ----- Original Message ----- From: John Kane <jrkrideau at inbox.com> To: r-help at r-project.org Cc: Sent: Tuesday, June 12, 2012 11:46 AM Subject: [R] Attempting to update from R 2.14 to 2.15 I am very new to Linux so I probably am doing something stupid but I cannot seem to update to R 2.15 Using Ubuntu 12.02 Precise Penguin I realise that debian packages are not updated regularly so I tried to follow the insructions at the R-site So far, I have modified /etc/apt/sources.list to read ## R CRAN added 2012-06-12 deb http://probability.ca/cran/bin/linux/debian squeeze-cran/ Issued command:? sudo apt-get update RESULT W: GPG error: http://probability.ca squeeze-cran/ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 06F90DE5381BA480 Ubuntu seems to? have happily run through all the other updates with no problem Any suggestions? Thanks John Kane Kingston ON Canada sessionInfo() R version 2.14.1 (2011-12-22) Platform: i686-pc-linux-gnu (32-bit) locale: [1] LC_CTYPE=en_US.UTF-8? ? ? LC_NUMERIC=C? ? ? ? ? ? ? [3] LC_TIME=en_CA.UTF-8? ? ? ? LC_COLLATE=en_US.UTF-8? ? [5] LC_MONETARY=en_CA.UTF-8? ? LC_MESSAGES=en_US.UTF-8? [7] LC_PAPER=C? ? ? ? ? ? ? ? LC_NAME=C? ? ? ? ? ? ? ? [9] LC_ADDRESS=C? ? ? ? ? ? ? LC_TELEPHONE=C? ? ? ? ? ? [11] LC_MEASUREMENT=en_CA.UTF-8 LC_IDENTIFICATION=C? ? ? attached base packages: [1] stats? ? graphics? grDevices utils? ? datasets? methods? base ____________________________________________________________ GET FREE SMILEYS FOR YOUR IM & EMAIL - Learn more at http://www.inbox.com/smileys Works with AIM?, MSN? Messenger, Yahoo!? Messenger, ICQ?, Google Talk? and most webmails ______________________________________________ R-help at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Thanks Dan. Results sudo apt-key adv --keyserver keyserver.ubuntu.com --recv-keys E084DAB9 [sudo] password for john: Executing: gpg --ignore-time-conflict --no-options --no-default-keyring --secret-keyring /tmp/tmp.28YKFHKFht --trustdb-name /etc/apt/trustdb.gpg --keyring /etc/apt/trusted.gpg --primary-keyring /etc/apt/trusted.gpg --keyserver keyserver.ubuntu.com --recv-keys E084DAB9 gpg: requesting key E084DAB9 from hkp server keyserver.ubuntu.com gpg: key E084DAB9: public key "Michael Rutter <marutter at gmail.com>" imported gpg: Total number processed: 1 gpg: imported: 1 (RSA: 1) ## So it looks like I have the gpg key but I get the same result. ## I get basically the same result with all the other approachs. W: GPG error: http://probability.ca squeeze-cran/ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 06F90DE5381BA480 john at john-K53U:~$ John Kane Kingston ON Canada> -----Original Message----- > From: nordldj at dshs.wa.gov > Sent: Tue, 12 Jun 2012 16:02:55 +0000 > To: jrkrideau at inbox.com, r-help at r-project.org > Subject: RE: [R] Attempting to update from R 2.14 to 2.15 > > See if the SECURE APT section of the following link helps. > > http://cran.r-project.org/bin/linux/ubuntu/README > > > Dan > > Daniel J. Nordlund > Washington State Department of Social and Health Services > Planning, Performance, and Accountability > Research and Data Analysis Division > Olympia, WA 98504-5204 > > >> -----Original Message----- >> From: r-help-bounces at r-project.org [mailto:r-help-bounces at r- >> project.org] On Behalf Of John Kane >> Sent: Tuesday, June 12, 2012 8:46 AM >> To: r-help at r-project.org >> Subject: [R] Attempting to update from R 2.14 to 2.15 >> >> I am very new to Linux so I probably am doing something stupid but I >> cannot seem to update to R 2.15 >> >> Using Ubuntu 12.02 Precise Penguin >> >> I realise that debian packages are not updated regularly so I tried to >> follow the insructions at the R-site >> >> So far, I have modified /etc/apt/sources.list to read >> >> ## R CRAN added 2012-06-12 >> deb http://probability.ca/cran/bin/linux/debian squeeze-cran/ >> >> Issued command: sudo apt-get update >> >> RESULT >> W: GPG error: http://probability.ca squeeze-cran/ Release: The >> following signatures couldn't be verified because the public key is not >> available: NO_PUBKEY 06F90DE5381BA480 >> >> Ubuntu seems to have happily run through all the other updates with no >> problem >> Any suggestions? >> >> Thanks >> John Kane >> Kingston ON Canada >> >> sessionInfo() >> R version 2.14.1 (2011-12-22) >> Platform: i686-pc-linux-gnu (32-bit) >> >> locale: >> [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C >> [3] LC_TIME=en_CA.UTF-8 LC_COLLATE=en_US.UTF-8 >> [5] LC_MONETARY=en_CA.UTF-8 LC_MESSAGES=en_US.UTF-8 >> [7] LC_PAPER=C LC_NAME=C >> [9] LC_ADDRESS=C LC_TELEPHONE=C >> [11] LC_MEASUREMENT=en_CA.UTF-8 LC_IDENTIFICATION=C >> >> attached base packages: >> [1] stats graphics grDevices utils datasets methods base >> >> ____________________________________________________________ >> GET FREE SMILEYS FOR YOUR IM & EMAIL - Learn more at >> http://www.inbox.com/smileys >> Works with AIM?, MSN? Messenger, Yahoo!? Messenger, ICQ?, Google Talk? >> and most webmails >> >> ______________________________________________ >> R-help at r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide http://www.R-project.org/posting- >> guide.html >> and provide commented, minimal, self-contained, reproducible code.____________________________________________________________ GET FREE SMILEYS FOR YOUR IM & EMAIL - Learn more at http://www.inbox.com/smileys Works with AIM?, MSN? Messenger, Yahoo!? Messenger, ICQ?, Google Talk? and most webmails
Thanks arun, Thanks arun . It looked good but no luck. I have updated my /etc/apt/sources.list, apparently installed the gpg code etc thanks to Dan N's pointers by no go. Still the same error message when doing sudo ap-get update. John Kane Kingston ON Canada> -----Original Message----- > From: smartpink111 at yahoo.com > Sent: Tue, 12 Jun 2012 09:11:58 -0700 (PDT) > To: jrkrideau at inbox.com > Subject: Re: [R] Attempting to update from R 2.14 to 2.15 > > HI, > > Maybe this link will be useful. > > (http://ubuntuforums.org/showthread.php?p=11876430). > > I also updated to R2.15 from 2.14 in Ubuntu 11.10 (Now I upgraded to > 12.04, so the update command is disabled).? I added one line in > /etc/apt/sources.list > > deb http://cran.mtu.edu/bin/linux/ubuntu oneiric/.? Similar type of code > is there in the link. > > > Hopefully, it works for you. > > > > Now, that I upgraded to Ubuntu 12.02, > > > ----- Original Message ----- > From: John Kane <jrkrideau at inbox.com> > To: r-help at r-project.org > Cc: > Sent: Tuesday, June 12, 2012 11:46 AM > Subject: [R] Attempting to update from R 2.14 to 2.15 > > I am very new to Linux so I probably am doing something stupid but I > cannot seem to update to R 2.15 > > Using Ubuntu 12.02 Precise Penguin > > I realise that debian packages are not updated regularly so I tried to > follow the insructions at the R-site > > So far, I have modified /etc/apt/sources.list to read > > ## R CRAN added 2012-06-12 > deb http://probability.ca/cran/bin/linux/debian squeeze-cran/ > > Issued command:? sudo apt-get update > > RESULT > W: GPG error: http://probability.ca squeeze-cran/ Release: The following > signatures couldn't be verified because the public key is not available: > NO_PUBKEY 06F90DE5381BA480 > > Ubuntu seems to? have happily run through all the other updates with no > problem > Any suggestions? > > Thanks > John Kane > Kingston ON Canada > > sessionInfo() > R version 2.14.1 (2011-12-22) > Platform: i686-pc-linux-gnu (32-bit) > > locale: > [1] LC_CTYPE=en_US.UTF-8? ? ? LC_NUMERIC=C > [3] LC_TIME=en_CA.UTF-8? ? ? ? LC_COLLATE=en_US.UTF-8 > [5] LC_MONETARY=en_CA.UTF-8? ? LC_MESSAGES=en_US.UTF-8 > [7] LC_PAPER=C? ? ? ? ? ? ? ? LC_NAME=C > [9] LC_ADDRESS=C? ? ? ? ? ? ? LC_TELEPHONE=C > [11] LC_MEASUREMENT=en_CA.UTF-8 LC_IDENTIFICATION=C > > attached base packages: > [1] stats? ? graphics? grDevices utils? ? datasets? methods? base > > ____________________________________________________________ > GET FREE SMILEYS FOR YOUR IM & EMAIL - Learn more at > http://www.inbox.com/smileys > Works with AIM?, MSN? Messenger, Yahoo!? Messenger, ICQ?, Google Talk? > and most webmails > > ______________________________________________ > R-help at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code.____________________________________________________________ FREE 3D MARINE AQUARIUM SCREENSAVER - Watch dolphins, sharks & orcas on your desktop!
The problem is that the Ubuntu site still has 2.14 and won't update til something like Ubuntu 12.10 or whatever the next release is. Thanks for all the help. John Kane Kingston ON Canada> -----Original Message----- > From: nordldj at dshs.wa.gov > Sent: Tue, 12 Jun 2012 16:58:27 +0000 > To: jrkrideau at inbox.com, r-help at r-project.org > Subject: RE: [R] Attempting to update from R 2.14 to 2.15 > >> -----Original Message----- >> From: John Kane [mailto:jrkrideau at inbox.com] >> Sent: Tuesday, June 12, 2012 9:42 AM >> To: Nordlund, Dan (DSHS/RDA); r-help at r-project.org >> Subject: RE: [R] Attempting to update from R 2.14 to 2.15 >> >> Thanks Dan. >> >> Results >> sudo apt-key adv --keyserver keyserver.ubuntu.com --recv-keys E084DAB9 >> [sudo] password for john: >> Executing: gpg --ignore-time-conflict --no-options --no-default-keyring >> --secret-keyring /tmp/tmp.28YKFHKFht --trustdb-name >> /etc/apt/trustdb.gpg --keyring /etc/apt/trusted.gpg --primary-keyring >> /etc/apt/trusted.gpg --keyserver keyserver.ubuntu.com --recv-keys >> E084DAB9 >> gpg: requesting key E084DAB9 from hkp server keyserver.ubuntu.com >> gpg: key E084DAB9: public key "Michael Rutter <marutter at gmail.com>" >> imported >> gpg: Total number processed: 1 >> gpg: imported: 1 (RSA: 1) >> >> >> >> ## So it looks like I have the gpg key but I get the same result. >> ## I get basically the same result with all the other approachs. >> >> W: GPG error: http://probability.ca squeeze-cran/ Release: The >> following signatures couldn't be verified because the public key is not >> available: NO_PUBKEY 06F90DE5381BA480 >> john at john-K53U:~$ >> >> >> John Kane >> Kingston ON Canada >> > > My only other thought is to try the Ubuntu binary rather than Debian > > http://<my.favorite.cran.mirror>/bin/linux/ubuntu precise/ > > > Dan > > Daniel J. Nordlund > Washington State Department of Social and Health Services > Planning, Performance, and Accountability > Research and Data Analysis Division > Olympia, WA 98504-5204____________________________________________________________ Publish your photos in seconds for FREE TRY IM TOOLPACK at http://www.imtoolpack.com/default.aspx?rc=if4
Thanks I have just subscribed. John Kane Kingston ON Canada> -----Original Message----- > From: nordldj at dshs.wa.gov > Sent: Tue, 12 Jun 2012 17:26:02 +0000 > To: jrkrideau at inbox.com, r-help at r-project.org > Subject: RE: [R] Attempting to update from R 2.14 to 2.15 > >> -----Original Message----- >> From: John Kane [mailto:jrkrideau at inbox.com] >> Sent: Tuesday, June 12, 2012 10:07 AM >> To: Nordlund, Dan (DSHS/RDA); r-help at r-project.org >> Subject: RE: [R] Attempting to update from R 2.14 to 2.15 >> >> The problem is that the Ubuntu site still has 2.14 and won't update til >> something like Ubuntu 12.10 or whatever the next release is. >> >> Thanks for all the help. >> >> John Kane >> Kingston ON Canada >> >> >>> -----Original Message----- >>> From: nordldj at dshs.wa.gov >>> Sent: Tue, 12 Jun 2012 16:58:27 +0000 >>> To: jrkrideau at inbox.com, r-help at r-project.org >>> Subject: RE: [R] Attempting to update from R 2.14 to 2.15 >>> >>>> -----Original Message----- >>>> From: John Kane [mailto:jrkrideau at inbox.com] >>>> Sent: Tuesday, June 12, 2012 9:42 AM >>>> To: Nordlund, Dan (DSHS/RDA); r-help at r-project.org >>>> Subject: RE: [R] Attempting to update from R 2.14 to 2.15 >>>> >>>> Thanks Dan. >>>> >>>> Results >>>> sudo apt-key adv --keyserver keyserver.ubuntu.com --recv-keys >> E084DAB9 >>>> [sudo] password for john: >>>> Executing: gpg --ignore-time-conflict --no-options --no-default- >> keyring >>>> --secret-keyring /tmp/tmp.28YKFHKFht --trustdb-name >>>> /etc/apt/trustdb.gpg --keyring /etc/apt/trusted.gpg --primary- >> keyring >>>> /etc/apt/trusted.gpg --keyserver keyserver.ubuntu.com --recv-keys >>>> E084DAB9 >>>> gpg: requesting key E084DAB9 from hkp server keyserver.ubuntu.com >>>> gpg: key E084DAB9: public key "Michael Rutter <marutter at gmail.com>" >>>> imported >>>> gpg: Total number processed: 1 >>>> gpg: imported: 1 (RSA: 1) >>>> >>>> >>>> >>>> ## So it looks like I have the gpg key but I get the same result. >>>> ## I get basically the same result with all the other approachs. >>>> >>>> W: GPG error: http://probability.ca squeeze-cran/ Release: The >>>> following signatures couldn't be verified because the public key is >> not >>>> available: NO_PUBKEY 06F90DE5381BA480 >>>> john at john-K53U:~$ >>>> >>>> >>>> John Kane >>>> Kingston ON Canada >>>> >>> >>> My only other thought is to try the Ubuntu binary rather than Debian >>> >>> http://<my.favorite.cran.mirror>/bin/linux/ubuntu precise/ >>> > > Actually, I do have one more "final thought". The R-sig-debian mailing > list has been helpful to me for dealing with R and Ubuntu. You might try > posting your problem there. Here is a URL for signing up to the list. > > https://stat.ethz.ch/mailman/listinfo/r-sig-debian > > > Dan > > Daniel J. Nordlund > Washington State Department of Social and Health Services > Planning, Performance, and Accountability > Research and Data Analysis Division > Olympia, WA 98504-5204____________________________________________________________ FREE 3D EARTH SCREENSAVER - Watch the Earth right on your desktop!
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