Displaying 20 results from an estimated 10000 matches similar to: "library/function that estimates parameters of well known distributions from empirical data?"
2008 Sep 22
1
Statistical question re assessing fit of distribution functions.
I am in a situation where I have to fit a distrution, such as cauchy or
normal, to an empirical dataset. Well and good, that is easy.
But I wanted to assess just how good the fit is, using ks.test.
I am concerned about the following note in the docs (about the example
provided): "Note that the distribution theory is not valid here as we have
estimated the parameters of the normal
2003 Jul 25
5
named list 'start' in fitdistr
Hi R lovers!
I'd like to know how to use the parameter 'start' in the function
fitdistr()
obviously I have to provide the initial value of the parameter to optimize
except in the case of a certain set of given distribution
Indeed according to the help file for fitdistr
" For the following named distributions, reasonable starting values
will be computed if `start'
2002 Aug 06
2
Estimating Weibull parameters
Hi R-Community,
I have a vector of Weibull distributed observations and I would like to
estimate the parameters "shape" and "scale" of the Weibull distribution.
Is there a way to do this in R?
Much thanks in advance,
Hagen Schm?ller
--
-----------------------------------------------------------------------
Dipl.-Ing. Hagen K. Schm?ller
Institut f?r Elektrische Anlagen und
2011 Nov 03
1
Fit continuous distribution to truncated empirical values
Hi all,
I am trying to fit a distribution to some data about survival times.
I am interested only in a specific interval, e.g., while the data lies in the interval (0,...., 600), I want the best for the interval (0,..., 24).
I have tried both fitdistr (MASS package) and fitdist (from the fitdistrplus package), but I could not get them working, e.g.
fitdistr(left, "weibull", upper=24)
2005 Jun 08
1
Fitting Theoretical Distributions to Daily Rainfall Data
Dear List Members,
I need a bit help about fitting some theoretical
distributions (such as geometric, exponential,
lognormal or weibull distribution) to the following
*dry spell*, *wet spell*, *cycles (Wet-Dry or
Dry-Wet)* from my meteorological (daily rainfall) data
http://www.angelfire.com/ab5/get5/R.rainfall.txt only
for rainy seasen (july - september) of 14 years only:
2008 Oct 30
1
Is possible, on biological grounds, suggest to fitdistr (MASS library) that the estimated parameters must be between two values?
Sorry if it is a silly question, I haven't found documentation on this and I
don't know if it is possible.
library(MASS) ## for fitdistr
library(msm) ## for dtnorm
#prepare truncated normal distribution
dtnorm0 <- function(x, mean, sd , log = FALSE) {
dtnorm(x, mean, sd, 105, 135, log)
}
set.seed(1)
#Generate normal distribution with the TRUE population mean (day 106 of the
2011 May 03
3
fitting distributions using fitdistr (MASS)
Please guide me through to resolve the error message that I get
this is what i have done.
>x1<- rnorm(100,2,1)
>x1fitbeta<-fitdistr(x1,"beta")
Error in fitdistr(x1, "beta") : 'start' must be a named list
Yes, I do understand that sometime for the distribution to converge to the
given set of data, it requires initial parameters of the distribution, to
2008 Sep 22
2
Why isn't R recognising integers as numbers?
I have a number of files containing anywhere from a few dozen to a few
thousand integers, one per record.
The statement "refdata18 =
read.csv("K:\\MerchantData\\RiskModel\\Capture.Week.18.csv", header =
TRUE,na.strings="")" works fine, and if I type refdata18, I get the integers
displayed, one value per record (along with a record number). However, when
I try "
2010 Jul 14
2
R's Data Dredging Philosophy for Distribution Fitting
Forum,
I'm a grad student in Civil Eng, took some Stats classes that required
students learn R, and I have since taken to R and use it for as much as I
can. Back in my lab/office, many of my fellow grad students still use
proprietary software at the behest of advisers who are familiar with the
recommended software (Statistica, @Risk (Excel Add-on), etc). I have spent
a lot of time learning
2005 Apr 28
3
have to point it out again: a distribution question
Stock returns and other financial data have often found to be heavy-tailed.
Even Cauchy distributions (without even a first absolute moment) have been
entertained as models.
Your qq function subtracts numbers on the scale of a normal (0,1)
distribution from the input data. When the input data are scaled so that
they are insignificant compared to 1, say, then you get essentially the
2010 May 28
3
Gelman 2006 half-Cauchy distribution
Hi,
I am trying to recreate the right graph on page 524 of Gelman's 2006
paper "Prior distributions for variance parameters in hierarchical
models" in Bayesian Analysis, 3, 515-533. I am only interested, however,
in recreating the portion of the graph for the overlain prior density
for the half-Cauchy with scale 25 and not the posterior distribution.
However, when I try:
2005 Nov 02
5
Distribution fitting problem
I am using the MASS library function
fitdistr(x, dpois, list(lambda=2))
but I get
Error in optim(start, mylogfn, x = x, hessian = TRUE, ...) :
Function cannot be evaluated at initial parameters
In addition: There were 50 or more warnings (use warnings() to see the first
50)
and all the first 50 warnings say
1: non-integer x = 1.452222
etc
Can anyone tell me what I am doing
2006 Feb 01
1
Cauchy distribution limits
I have question (curiosity) regarding returned values of R's qcauchy
() function,
for nonexceedance probability (F). It seems the ideal returned range
of cauchy distribution should be [-Inf,Inf].
For F=0
> qcauchy(0)
[1] -Inf
but for F=1
> qcauchy(1)
[1] 8.16562e+15
It seems to me that the proper return value should be Inf???
For default (location=0,scale=1) quantile function of
2010 Jul 08
1
Query about using timestamps returned by SQL as 'factor' for split
I have a simple query as follows:
"SELECT
m_id,sale_date,YEAR(sale_date),WEEK(sale_date),return_type,DATEDIFF(return_date,sale_date)
AS elapsed_time FROM risk_input"
I can get, and view, all the data that that query returns. The question is,
sale_date is a timestamp, and I need to call split to group this data by
m_id and the week in which the sale occurred. Obviously, I would
2008 Jun 11
2
MLE Estimation of Gamma Distribution Parameters for data with 'zeros'
Greetings, all
I am having difficulty getting the fitdistr() function to return without
an error on my data. Specifically, what I'm trying to do is get a
parameter estimation for fracture intensity data in a well / borehole.
Lower bound is 0 (no fractures in the selected data interval), and upper
bound is ~ 10 - 50, depending on what scale you are conducting the
analysis on.
I read in the
2008 Oct 20
1
How to get estimate of confidence interval?
I thought I was finished, having gotten everything to work as intended. This
is a model of risk, and the short term forecasts look very good, given the
data collected after the estimates are produced (this model is intended to
be executed daily, to give a continuing picture of our risk). But now there
is a new requirement.
I have weekly samples from a non-autonomous process (i.e. although well
2002 Jun 28
1
Problem in optim(method="L-BFGS-B") (PR#1717)
Full_Name: Jörg Polzehl
Version: 1.5.1
OS: Windows 2000
Submission from: (NULL) (193.175.148.198)
When calculating MLE's in a variance component model using constrained
optimization, i.e. optim(...,method="L-BFGS-B",...) I observed an inproper
behaviour in cases where
the likelihood function was evalueted at the constraint. Parameters and value of
the
function at the constraint
2008 Oct 16
1
Two last questions: about output
Here is my little scriptlet:
optdata =
read.csv("K:\\MerchantData\\RiskModel\\AutomatedRiskModel\\soptions.dat",
header = FALSE, na.strings="")
attach(optdata)
library(MASS)
setwd("K:\\MerchantData\\RiskModel\\AutomatedRiskModel")
for (i in 1:length(V4) ) {
x = read.csv(as.character(V4[[i]]), header = FALSE, na.strings="");
y = x[,1];
fp =
2008 Feb 10
1
Error in optim while using fitdistr() function for estimation of parameters
Hello,
I am trying to fit distribution for data consisting of 421 readings.It is
basically no of requests arrived per minute.It contains many 0 entries as no
of requests.When i use
fd<-fitdistr(V2,"gamma")
I get following error:
Error in optim(x = c(0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, :
initial value in 'vmmin' is not finite
What should I do ? I need
2008 Sep 19
0
Re lative Novice ? "Can I get some explanation of the docs for fitdistr(MASS)?"
In the docs I see:
Usage
fitdistr(x, densfun, start, ...)
Arguments
x A numeric vector.
densfun Either a character string or a function returning a density
evaluated at its first argument.
Distributions "beta", "cauchy", "chi-squared", "exponential", "f", "gamma",
"geometric", "log-normal", "lognormal",