similar to: R/Splus--Perl Interface && ssh

Hi, I've just started using RSPerl. Though also tests in directory "/usr/local/lib/R/library/RSPerl/tests/" are passed successfully, I meet the problem with the following codes; use strict; use warnings; use R; use RReferences; my @array1=1..10; my @array2=1..39; &R::initR("--silent"); &R::library("RSPerl"); my $tt=&R::call("t.test",

Hi, I am somewhat new to R and RSPerl, but I think this particular problem has to do with RSPerl and so I am not sure if this is the right forum to ask for help. Nevertheless I am quite sure that many of you would have used RSPerl with R. My hardware platform is a Sun/Solaris V440 server running Solaris 9 operating system I use the gcc-3.4.0 compiler to compile R without any problems. My

Hi, I use RSPerl on Ubuntu and Apache2 web server. It is my first experience with R language :-) I have the next code embedded into a Perl CGI: use R; use RReferences; my @x; &R::initR("--silent","--no-save"); &R::library("RSPerl"); @x = &R::call("rnorm", 10); &R::call("plot", \@x); The CGI works but no plot is shown. Apache2

Hi all, I'm trying to use the RSPerl module in a script that uses threads. I am able to call R functions without a problem when I don't use threads. However, using threads, I get varying errors depending on how I call the R functions. If I call the R::initR function in the "boss" thread and then try to call R functions from a "worker" thread, I get the following

My previous post seems to have been eaten by the server because of embedded code. You can now find that code at: http://tinyurl.com/3o88j2 I aoplogize for the double-posting... -Jay Hi all, I'm trying to use the RSPerl module in a script that uses threads. I am able to call R functions without a problem when I don't use threads. However, using threads, I get varying errors depending

Hi, I installed RSPerl (RSPerl_0.91-2.tar.gz) and after loading the library I get a buffer overflow. below is the output from R and below that the messages during the installation. Its on an AMD opteron system running Fedora Core5 R version 2.4.1 (2006-12-18). Thank you very much for your help. Ido > sessionInfo() R version 2.4.1 (2006-12-18) x86_64-redhat-linux-gnu locale:

Dear R-helpers, I am running well Perl and R on my Debian Linux, and I tried RSPerl. Installation is ok and all simple functions run well. But I have a problem to call the "lines" function. I would like to draw an histogram with the density curve on. Is is OK in R with the command: >x<-rnorm(1000) >hist(x,prob=T) >lines(density(x)) for example. Now, I have a Perl script

Hi - I'm trying to set up a parallelized batch job that is run under rmpi and managed by sge, using qsub, but it reports that it can't load RMySQL because it can't find the libmysqlclient.so.15 file. Note, when I run R interactively, and manually load the RMySQL library, it works without a hitch, however, when I have qsub launch R, it reports the following error: Error in

Hi, I've just started using R and RSPerl. I have some code as follows: &R::initR("--no-save"); &R::call("t.test", (\@array1, \@array2)); where @array1 and @array2 are both 1-dimensional arrays in Perl having 54675 elements each. On execution the output is as follows: Calling R function name `t.test', # arguments: 3 1) Arg type 3 Got a reference to a

Hi, The problem is most likely, you need to call a R CMD BATCH with your arguments and the R-script inside of a shell script that you submit to your qsub. Unfortunately we don't use qsub anymore so can't test it, but it should be as follows: R-script eg. test.R: > ##First read in the arguments listed at the command line > args=(commandArgs(TRUE)) > > ##args is now a list of

Hello, I tried the R-Sig-Mac list with this query, but had no takers. I hope that the following isn't too far off the mark for this list. Many thanks in advance if someone can help me out! Quick summary: I can't get RSPerl working on a PPC G5 with the pre-compiled binary for Mac OS X, but it does work if I compile R from source with the "--enable-R-shlib" flag. If I

Hi, installation of RSPerl works fine without errors. Running RSPerl does not work at all. If I start R, and then enter this command: library(RSPerl) this error appears: ----------------- > library(RSPerl) Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library "/usr/local/lib/R/library/RSPerl/libs/RSPerl.so":

Dear list, I have updated to version R-2.10.0. When I try to load the RSPerl library I get the following error: > library(RSPerl) Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared library '/usr/local/lib/R/library/RSPerl/libs/RSPerl.so': /usr/local/lib/R/library/RSPerl/libs/RSPerl.so: undefined symbol: boot_DB_File__Glob Error: package/namespace load failed

Hello, I am having errors when I try to install RSPerl-0.92 under fedora 14. I have the following rpms installed: R-devel-2.13.0-1.fc14.x86_64 R-core-2.13.0-1.fc14.x86_64 perl-5.12.3-143.fc14.x86_64 perl-devel-5.12.3-143.fc14.x86_64 perl-ExtUtils-* (all of them from yum) Now I get the following errors: # R CMD INSTALL RSPerl_0.92-1.tar.gz * installing to library ‘/usr/lib64/R/library’ *

Hi, I am having problems installing RSPerl 0.92-1 in my Mac OSX 10.5.1. I?ve installed correctly R-2.6.1 with the .mpkg. I run the next command: <R CMD INSTALL --configure-args=' --with-in- perl ' RSPerl> And the next error message appears: RSPerl * Installing to library '/Library/Frameworks/R.framework/Resources/ library' * Installing *source* package

Hi, I'm trying to install de RSPerl module and i have some problems trying to test it. I've tried to contact with the author but the e-mail address seems not to exist. Hope that anyone in this list could explain me a little about this problem. I have a bash shell and what i do is the following: #PERLLIB=/usr/lib/R/library/RSPerl/share/blib/arch:/usr/lib/R/library/RSPerl/share/blib/lib #

Dear list, I've a package, myPkg, which was developed on R v 2.6.1. I have installed R v2.9.2 from source, with a shared library and tcktk support. The package, myPkg, depends on RSPerl, and imports it in its NAMESPACE. I've downloaded and installed RSPerl using command: >R CMD INSTALL -c --configure-args="--with-modules='IO \ Fcntl Socket Storable XML::Parser::Expat

Hello, Has anyone gotten RSPerl ( (http://www.omegahat.org/RSPerl/) to work on Mac OS X? After installing RSPerl, I run the test program (or, even simpler, perl -e 'use R;') and get the following error: dyld: perl Undefined symbols: _RPerl_createRProxy _RPerl_discardRProxy _RPerl_getProxyValue _RPerl_getReferenceName _addPerlConverterRoutine _fromPerl _tryEval _userLevelConversionToPerl

If anyone can help it would be very much apreciated... System RedHat 9 R installed as # ./configure --enable-R-shlib # make # make install and R seems to work fine ... Then I do # R INSTALL --clean --configure-args='--with-in-perl' RSPerl_0.5-7.tar.gz # export R_HOME=/usr/local/lib/R # cd /usr/local/lib/R/library/RSPerl/examples/ # perl -I

I know that I'm a fool for trying to get this working under windows but I'm obliged. Note I have R 2.6.1 and the latest cygwin. I'm running winxp sp2. 1) If I issue: R CMD INSTALL RSPerl_0.92-1.tar.gz, it fails as such ---------- Making package RSPerl ------------ ********************************************** WARNING: this package has a configure script It