similar to: error with lme within a loop

I have found that specifying different "sizes" in the sample command has a funny effect on the random sampling. The code below is a condensed version of a function I wrote to simulate a bootstrap method. For simplicity, I eliminated the internal bootstrap loop, but kept a statement to draw one bootstrap sample, because this is where the problem occurs. The output (mean(y)^2) should be

Hi all, I am currently doing a consistency analysis using an lmer model and trying to use parametric bootstrapping for the confidence intervals. My model is like this: model<-lmer(y~A+B+(1|C/D)+(1|E),binomial) where E is the individual level for consistency analysis, A-D are other fixed and random effects that I have to control for. Following Nakagawa and Scheilzeth I can work out the

Dear R users, I am trying to fit the following ANCOVA model in R2.4.0 Y_ij=mu+alpha_i+beta*(X_ij-X..)+epsilon_ij Particularly I am interested in obtaining estimates for mu, and the effects alpha_i I have this data (from the book Applied Linear Statistical Models by Neter et al (1996), page 1020) y<-c(38,43,24,39,38,32,36,38,31,45,27,21,33,34,28)

Dear R-users, I am trying to run some simulations in batch mode. In an older version of the program, I used rterm --vsize=100M --nsize=5000K --restore --save <input file> output file, however, in the new version R 2.2.0 , the parameters vsize and nsize are ignored. I can use the command memory.limit to increase memory, but I am not sure if this corresponds to vsize and nsize.

Dear R user, I am trying to reproduce the results in Montgomery D.C (2001, chap 13, example 13-1). Briefly, there are three suppliers, four batches nested within suppliers and three determinations of purity (response variable) on each batch. It is a two stage nested design, where suppliers are fixed and batches are random. y_ijk=mu+tau_i+beta_j(nested in tau_i)+epsilon_ijk Here are the

Buenas, En R, como en la mayoría del software estadístico, no se utiliza ningún nivel de confianza sino que lo que se calcula es el p-valor asociado al contraste. De forma que cuanto más cerca de 0 esté el p-valor "menos credibilidad le damos a la hipótesis nula". Dicho mejor, debemos rechazar la hipótesis nula si el p-valor está por debajo de nuestro nivel de confianza. Por ejemplo,

I applied the patch to the trunk version successfully, although I get an error in between: 1 out of 1 hunk FAILED -- saving rejects to file lib/Transforms/IPO/CMakeLists.txt.rej Can I ignore the error? The patch exits normally except for that error. Also, I tried to apply the patch to the LLVM 3.0 but does not work at all. Is the trunk version the only one where the patch can be applied?

Hi Hal, On 02/12/11 21:06, Hal Finkel wrote: > On Fri, 2011-12-02 at 19:08 +0100, Pablo Barrio wrote: >> I applied the patch to the trunk version successfully, although I get an error in between: >> >> 1 out of 1 hunk FAILED -- saving rejects to file lib/Transforms/IPO/CMakeLists.txt.rej >> >> Can I ignore the error? The patch exits normally except for that error.

Gracias Carlos. Yo también he visto el ejemplo que te pone chatGPT, pero la salida que te da no soy capaz de interpretarla. Os paso las ordenes y las respuestas de R de la propuesta de chatGPT Ejemplo.aov<- aov(P~TRAT+CORTE+REP) > summary (Ejemplo.aov) Df Sum Sq Mean Sq F value Pr(>F) TRAT 6 0.0028 0.00046 0.777 0.590 CORTE 2 0.5022 0.25110 424.542 <2e-16

On Fri, 2011-12-02 at 19:08 +0100, Pablo Barrio wrote: > I applied the patch to the trunk version successfully, although I get an error in between: > > 1 out of 1 hunk FAILED -- saving rejects to file lib/Transforms/IPO/CMakeLists.txt.rej > > Can I ignore the error? The patch exits normally except for that error. The attached patch should apply cleanly. Thanks for the feedback,

On Mon, 2011-12-12 at 12:59 +0100, Pablo Barrio wrote: > Hi Hal, > > On 02/12/11 21:06, Hal Finkel wrote: > > On Fri, 2011-12-02 at 19:08 +0100, Pablo Barrio wrote: > >> I applied the patch to the trunk version successfully, although I get an error in between: > >> > >> 1 out of 1 hunk FAILED -- saving rejects to file lib/Transforms/IPO/CMakeLists.txt.rej

Hi, Apologies for the very late response. We have manually tried the idea with a very simple Fibonacci sequence code. While being very very simple, the recursion cannot be handled by TRE. Because there are two recursive callsites, it also needs to keep some sort of state across iterations of the "while(stack not empty)" loop. We get between 2.5 and 8x slowdowns depending on which

On 12/12/11 17:07, Hal Finkel wrote: > On Mon, 2011-12-12 at 12:59 +0100, Pablo Barrio wrote: >> >> I'm still getting the following error: >> >> --- >> 1 out of 3 hunks FAILED -- saving rejects to file >> lib/Transforms/IPO/PassManagerBuilder.cpp.rej >> --- >> >> I'm using LLVM rev. 146369 (current trunk). Is it the same as you? If

On 28/11/2011, at 18:52, Hal Finkel wrote: > On Mon, 2011-11-28 at 17:49 +0100, Pablo Barrio wrote: >> How can I install the patch? Any step-by-step guide? > > First, grab the trunk versions of llvm and clang. This is detailed on > http://clang.llvm.org/get_started.html > > Then you apply the patch. On a Unix-like system, this is something like: > cd llvm > patch

On Tue, 2011-11-29 at 16:26 +0100, Pablo Barrio wrote: > On 28/11/2011, at 18:52, Hal Finkel wrote: > > > On Mon, 2011-11-28 at 17:49 +0100, Pablo Barrio wrote: > >> How can I install the patch? Any step-by-step guide? > > > > First, grab the trunk versions of llvm and clang. This is detailed on > > http://clang.llvm.org/get_started.html > > >

Hi all, I'm starting a new project and I'm having some trouble with the LLVM configure+Makefile system. When I type "./configure" in the sample project, it seems to work. However, after going down to the autoconf dir and typing "./AutoRegen.sh", when I go back to the project main dir and type "./configure" again, I get the following error: configure:

On Tue, 2011-12-13 at 13:00 +0100, Pablo Barrio wrote: > On 12/12/11 17:07, Hal Finkel wrote: > > On Mon, 2011-12-12 at 12:59 +0100, Pablo Barrio wrote: > >> > >> I'm still getting the following error: > >> > >> --- > >> 1 out of 3 hunks FAILED -- saving rejects to file > >> lib/Transforms/IPO/PassManagerBuilder.cpp.rej >

Hi all, I'm having trouble when trying to reuse some functions that use Boost::Exception into my LLVM-based application. As far as I know, LLVM turns off Exception handling (apparently for performance reasons), so I get the following link-time error in a few places: "undefined reference to `boost::throw_exception(std::exception const&)" When I compile the external code from

On 05/16/2011 05:11 PM, Sebastian Redl wrote: > On 16.05.2011, at 08:44, Pablo Barrio wrote: > >> Hi all, >> >> I'm having trouble when trying to reuse some functions that use >> Boost::Exception into my LLVM-based application. As far as I know, LLVM >> turns off Exception handling (apparently for performance reasons), so I >> get the following

Hi, I need to convert an integer into a string. I would normally do that in C++ by using the StringStream class, but the LLVM coding standards discourage using that class. The same coding standards suggest to use llvm:StringStream instead, but I cannot find that class anywhere; furthermore, the header file where it was supposed to be (according to the coding standards) doesn't even exist. Is