similar to: ps or pdf

Hello all, I discovered that the pdf device uses fonts to represent "points" symbols (as in plot(...,type="p",...) ). Namely it uses ZapfDingbats with symbol U+25cf. This can lead to problems when the font is not available, or available in another version (such as points being replaced by other symbols, or worst: slightly displaced). Furthermore, it also causes

Dear R-users When trying to import graphics from an pdf-file to a Vector graphics editor (I use Inkscape, but i've confirmed the same problem on adobe products), all points in the graphics turn out as "q"s. This example displays the beaviour: pdf(file="points are weird.pdf") plot(1:5) dev.off() When importing the file to inkscape, I get five neatly arranged little

Good Evening: I am putting together a large report with plots created in R, V 2.12.0. Most of the plots are created using ggplot2 V0.8.9. I use R's pdf() command to export the plot to a pdf file. I am exporting the plots and attempting to edit the title text in?Inkscape?primarily because ggplot2 does not support superscript or subscript formatting in the title text. For the report I am

Hi everyone, Is there an easy way to combine the counts from table()? Let's say that I have: x<-1:4 y<-2:5 I want to replicate: table(c(x,y)) using only table(x) and table(y) as input. The reason is that it's cumbersome to carry all the values around when all I care about are the counts. The actual situation has about a billion counts over ~150 categories. I know there's

*PLEASE FORWARD* Inkscape: An Open Source Vector Graphics (SVG) Editor Overview Birds of a Feather Meeting in Co-operation with Siggraph 04 at the Los Angeles Convention Center http://www.siggraph.org/s2004/conference/birds/index.php?pageID=conference Monday, 9 August 4 - 5 pm Holiday Inn City Center Santa Monica Room Jon Phillips + Jon Cruz ### Inkscape: Draw Freely.

I've just been trying to post-process some R-created heatmaps using Inkscape, but I can't get them to display correctly in that software. To reproduce: library(grid) r <- as.raster(matrix(runif(25), 5, 5)) pdf("test.pdf") grid.newpage() grid.raster(r, interpolate = FALSE) dev.off() This figure should be a five by five block of grey squares. This is what I see in the R GUI

Hello, All: ????? I'm unable to control the font size in plots to svg.? Consider the following: svg('cex-svg.svg') cex. <- 5 plot(1:2, cex.axis=cex.) text(1:2, 1:2, c('as', 'DF'), ????????? cex=cex.) dev.off() ????? When I open this in Gimp 2.10.4, the font size is tiny.? I also tried: svg('cex-svg.svg', width=15, height=15, pointsize=24) cex.

Hi everyone, I've had R crashing on rather repeatedly and I'd like to know if there's anything to be done with it. This is with R 2.3.0. That computer does not have R 2.4 installed on it. This is a Linux FC4 on 64bit processor. How to reproduce it: 1- ssh to server with X forwarding. 2- start R in a screen. 3- violently kill ssh on the client machine (in my case this is achieved by

hi BioC, I need to plot a vector of characters on a pdf device, not as a legend, but as in image by itself. I tried text but it is only related to locate text in a plot. what do you suggest? > sessionInfo() R version 2.6.0 (2007-10-03) x86_64-unknown-linux-gnu locale:

I generated a heatmap in R using the following commands: > mydata <- read.csv(file="Data.csv", header=TRUE, sep=",") > mydata <- mydata[rowSums(mydata[,-1]^2) >0, ] > rownames(mydata)=mydata$Name > mydata <- mydata[,2:253] > mydatamatrix <- data.matrix(mydata) > mydatascale <- t(scale(t(mydatamatrix))) > hr <-

System: Linux kernel 2.6.15 Ubuntu dapper R version 2.5.1 ESS 5.2.11 on Emacs 21.4.1 ------------------------- Colleagues Having read the posts on producing perfect graphs in R, or using inkscape to edit R graphics output, I have a related question. Lately I am publishing in a journal that is very picky about their graphics formats. It is more efficient for me to get the final picky details

I can compile RSPython without difficulty, been when I try to load it, I get the error messages below. Also below are some cryptic warnings I get on R boot (in case these are pertinent) and my sessionInfo(). Any help is appreciated. Thanks, Mark Warning messages: 1: In .updateMethodsInTable(fdef, where, attach) : Couldn't find methods table for "conditional", package

In the following snippet plot(1:10,1:10,type="n") points(1:5,1:5,pch="+") points(6:10,6:10,pch=20) legend(5,5, c("A","B"), pch=c("+",20)) I want to get a legend with a "+" and a solid circle (pch=20). However, what I get in the legend is "+" and "2". How can I get a "+" and a solid circle? thanks, Steve

Hi, Can anyone help me of the affylmGUI package, I can't get it work and searched for google but can't find any proper solutions. I get the error information each time when I load my cells files, which are shown in the following links. ------------- http://clarezoe.googlepages.com/1.png http://clarezoe.googlepages.com/2.png http://clarezoe.googlepages.com/3.png ------------- Errors also

Had some packages fail install so I updated to today's R-beta release. On updating packages the following packages still fail. sessionInfo follows. Mark Warning messages: 1: In install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : installation of package 'MANOR' had non-zero exit status 2: In install.packages(update[instlib == l,

I am having trouble getting tcltk package to load on openSuse 10.2 running R-devel. I have specifically put my /usr/share/tcl directory in my PATH, but R doesn't seem to see it. I also have installed tk on my system. Any ideas on what the problem is? Also, note that I have some warning messages on starting up R, not sure what they mean or if they are pertinent. Thanks, Mark Warning

Hi All, I tried to install AnnotationDBI like so: source("http://bioconductor.org/biocLite.R") biocLite("AnnotationDbi") and got this error: .... Loading required package: RSQLite Error in dyn.load(file, ...) : unable to load shared library '/RHEL3/local/lib64/R/library/ RSQLite/libs/RSQLite.so': /RHEL3/local/lib64/R/library/RSQLite/libs/RSQLite.so: undefined

Dear R-help, I would like to include the documentation of an R function in an *.rnw document processed by Sweave. Because I'm sharing my *.rnw files with colleagues under Linux and Windows (I'm on Mac OS X), I would like a pure R solution. The naive approach doesn't work, because Sweaving this *.rnw file: -------- tmp.rnw -------- \documentclass{article} \begin{document}

Hi Railsers, How do you design your applications? Do you start coding HTML? Start with the controllers/models? Start in a program like photoshop/gimp/illustrator/inkscape? I start in inkscape, it''s a SVG editor. I sketch all the views of my application, and then I create the views that belong to one controller in RHTML. After that, I do the models/controller, and move on to the

Hi, I have a tiny question about the graphics change in R 2.7.0. If I write a script ? la: options(device="pdf") formals(pdf)[c("file","onefile","width","height")] <- list("~/Rplot %03d.pdf", FALSE, 8, 8) plot(3) plot(4) both plots will be written into ONE pdf file. (not two as expected) This worked fine under 2.6.x In R 2.7.0 I