similar to: Barplot with grouping x axis and count data

Hi, I tried to do a nested Anova with the attached Data. My response variable is "survivors" and I would like to know the effect of (insect-egg clutch) "size", "position" (of clutch on twig) and "clone" (/plant genotype) on the survival of eggs (due to predation). Each plant was provided with three different sizes of clutches (45,15,5) and had

Dear all, Using the data set and code below, I am interested in modelling how egg temperature (egg.temp) is related to energy expenditure (kjday) and clutch size (treat) in incubating birds using the lme-function. I wish to generate the F-distribution for my model, and have tried to do so using the anova()-function. However, in the resulting anova-table, the parameter kjday has gone from being

I have taken the liberty of including the R-help mailing list on this reply as that is the appropriate place to discuss lmer results. On 4/5/06, Andreas Svensson <andreas.svensson at bio.ntnu.no> wrote: > Hello again > I have now recieved some helpful hints in this matter and will summarize them but first let me reiterate the problem: > > I had two treatments: 2 types of food

Dear all, Using the data set and code below, I am interested in modelling how egg temperature (egg.temp) is related to energy expenditure (kjday) and clutch size (treat) in incubating birds using the lme-function. I wish to generate the F-distribution for my model, and have tried to do so using the anova()-function. However, in the resulting anova-table, the parameter kjday has gone from

Dear R-users, I set up an experiment where I put up bluebird boxes across an urbanization gradient. I monitored these boxes and at some point I pulled a feather from a chick and a friend used spectral properties (rtot, a continuous var) to index chick health. There is an effect of sex that I would like to include but how would I set up a regression and look at the effect of urbanization

Dear R-experts, Quite new to R on this end, but learning fast (I hope). I am running version 2.7.1 on Windows Vista. I have small dataset which consists of: # NestID: nest indicator for each chicken. Siblings sharing the same nest have the same nest indicator. # Chick: chick indicator consisting of a unique ID for each single chick. # Year: 1, 2. # ClutchSize: 1-, 2- , 3-eggs. # HO:

CID DISTRICT SCHOOL YRofSTUDY DATE.ENTRY SEX AGE EGGS.M EGGS.MII EGGS.H POBADN0130 PO Badongo 0 18.1.08 2 11 0 -1 73 POBADN0117 PO Badongo 0 18.1.08 1 10 0 -1 59 POBADN0160 PO Badongo 0 18.1.08 1 11 0 -1 56 POBADN0112 PO Badongo 0 18.1.08 2 10 0 -1 47 POBADN0053 PO Badongo 0 18.1.08 1 8 0 -1 42 POBADN0141 PO Badongo 0 18.1.08 2 11 0 -1 36 POBADN0056 PO Badongo 0 18.1.08 1 8 0 -1 26 POBADN0127 PO

Hi Everyone, I'm a pretty useless r-er but have data that SPSS etc doesn't like. I've managed to do GLMs for my data, but now need to fit a thin plate spline for my data (arcsine.success~date.num:clutch.size) If anyone has a bit of spare time and could come up with a bit of code I'd be very grateful- I just don't get R language! Thanks Rach -- View this message in context:

Daniel, Tobias, Renato and myself have been looking a little bit at the potential underlying reason for why http://llvm.org/perf/ is instable, and have found some clues. I want to share them here to give people with more experience in the frameworks used by LNT (flask, sqlalchemy, wsgi, .) a chance to check if our reasoning below seems plausible. Daniel noticed the following backtrace in the

Hi, I'm trying to work through a Nested ANOVA for the following scenario: 20 males were used to fertilize eggs of 4 females per male, so that female is nested within male (80 females used total). Spine length was measured on 11 offspring per family, resulting in 880 measurements on 80 families. I used the following two commands: summary(aov(Spinelength ~ Male*Female)) and

Apparently there are some applications *cough*healthscreen*cough* which NEED to have a modem set up under the "Phone and Modem" options using the control panel (which IMHO is just silly). The COM port is there, terminals see it and can talk to the EXTERNAL modem connected to it with no trouble, but the application won't talk to the COM port directly. As a result the application

A little off topic this morning...I'm thinking about switching out of Comast's clutches to another high-speed service. I've tried TDS DSL, but they were half the speed comast was/is. I''ve looked into Speakeasy, since I heard a few of ya talking about them. Since I had TDS, that kinda tells me I can get DSL. I live in Mount Juliet, on MT juliet road, behind the

Hi, I have designed the following function to extract count frequencies from an array of integers. For example... # Tipical array x <- cbind(1,1,1,1,1,2,2,2,2,3,3,3,3,4,5,6,7,22) # Define the frequency function frequency <- function(x){ max <- max(x) j <- c() for(i in 1:max){ j[i] <- length(x[x==i]) } return(j) } fre <- frequency(x) plot(fre) How

I have a server (A) with a directory structure I want to copy to another server (/usr/local/bin...) On the client (B), only /usr exists (/usr/local doesn't). I used: /opt/PKGrsync/bin/rsync -a --delete --force --rsync-path=/opt/PKGrsync/bin/rsync --exclude=save -v -v /usr/local/bin B:/usr/local/bin but it failed with: opening connection using /usr/bin/ssh B /opt/PKGrsync/bin/rsync

The reference implementation server is based on TG2. The majority of the boiler plate code has been stripped out to focus the server solely on the functionality necessary for a management server. Signed-off-by: Darryl L. Pierce <dpierce at redhat.com> --- server/.gitignore | 4 + server/MANIFEST.in | 4 +

On Sun, Apr 11, 2010 at 10:29:28AM +0200, Duncan Sands wrote: > Hi Jack, > >> bash-3.2$ GCC=/sw/bin/gcc-4 CC=gcc-4 CXX=g++-4 CFLAGS=-I/sw/include CXXFLAGS=-I/sw/include LLVM_CONFIG=/sw/lib/llvm/bin/llvm-config make >> g++-4 -c -I/sw/lib/llvm/include -D_DEBUG -D_GNU_SOURCE -D__STDC_LIMIT_MACROS -D__STDC_CONSTANT_MACROS -MD -MP -DIN_GCC -DREVISION=\"100954M\"

Peter, FYI, I am interested in dragon-egg because I have been preparing updated llvm/llvm-gcc42 2.7 packaging for fink and was considering adding in an addition dragon-egg package if the additional gcc patch didn't destablize gcc45. Also I am really interested in checking the Polyhedron 2005 benchmarks for gcc 4.5.0 with and without dragon-egg. The Polyhedron 2005 benchmarks improved about

I have data on the proportion of clutches experiencing different fates (e.g., 4 different sources of mortality) for 5 months . I need to test 1) if the overall proportion of these different fates is different over the entire study and 2) to see if there are monthly differences within (and among) fate types. Thus, I am pretty sure this is an RM analysis -( I measure the same quadrats each month).

Hi, I started developing with wxRuby with the 0.1.0 release, and have been very pleased. As a ruby and wxWindows fan, I was happy to see the wxruby project, and have been very impresed with the implementation. I''ve been working on supporting the XML resources (wxXRC), and have an issue I''d like some advice on. XRC plugged in very nicely, and I was able to query resources.

Dear R-users, I did some more research and I'm still not sure how to set up an ANCOVA with nestedness. Specifically I'm not sure how to express chicks nested within boxes. I will be getting Pinheiro & Bates (Mixed Effects Models in S and S-Plus) but it will not arrive for another two weeks from our interlibrary loan. The goal is to determine if there are urbanization (purban)