similar to: installing R with RPM

Hello, dear R experts! I run R on Debian 'sarge' platform. There is 'r-mathlib' package in Debian distribution, which is described as: $ dpkg --status r-mathlib ... This packages provides the libRmath shared and static libraries which can be called from standalone C or C++ code. Well, I use runif() function in test_runif.c: #include <Rmath.h> main() { // ...

Hello, all, I have the same question as the last mail I sent. I have installed libRmath in my system. But I still can not link Rmath through -lRmath. The whole process is as follow.Is there anybody who is so kind to help me find out the problem? I will appreciate very much. [credsim at confsys ~]$ cd /usr/lib [credsim at confsys lib]$ ls -l libR* -rw------- 1 bcdesai bcdesai 237828 Apr

Hi, I am trying to install Bioconductor software on our server with Red Hat Linux Enterprise (Server) edition version 4, 32GB Ram and automatic proxy configuration (http://www.ntu.edu.sg/proxy.pac) setting. from http://www.bioconductor.org <http://www.bioconductor.org/> website but couldn't install. I encounter the following errors highlighted in RED when I try to download from

Hi All, A group of about 3-4 of us are looking into the possibility of incorporating R into OpenOffice's (OO) spreadsheet component (sc) . We wish to use OO's nice ODBC ability to query a postgresql-based gene expression database thus populating an OO sc and then use Bioconductor via R to analyse user-selected parts of this spreadsheet. We've looked at and compiled and used

Hello. I've made out a Debian package out of Maxence Guesdon's OCaml/R bindings: http://yziquel.homelinux.org/topos/debian-ocamlr.html http://yziquel.homelinux.org/debian/pool/main/o/ocaml-r/ The upstream software itself is on the following page: http://home.gna.org/ocaml-r/ This binding is dynamically linked to the /usr/lib/R/lib/libR.so and to the /usr/lib/libRmath.so libraries.

Hi, looking on the build scripts, I noticed on configure.ac ## <FIXME> ## Completely disable using libtool for building shlibs until libtool ## fully supports Fortran and C++. ## AC_ARG_WITH([libtool], ## [AS_HELP_STRING([--with-libtool],[use libtool for building shared libraries @ <:@yes@:>@])], ## [use_libtool="${withval}"], ## [use_libtool=yes]) ##

Hello, It seems the recent Mac OS X 10.4.11 update installed a new libBLAS.dylib in the Accelerate framework which either contains a bug itself or exposes a bug somewhere in R's lapack code on the PowerPC G4 and G5. My build of R 2.6.0 executed the tests/lapack.R code succesfully when I upgraded when 2.6.0 was released. After the OS update, it now crashes. This happens both with the version I

Hi, I am trying to update my version of R on Centos 4. $uname -a Linux 2.6.9-78.0.5.ELsmp #1 SMP Wed Oct 8 07:06:30 EDT 2008 x86_64 x86_64 x86_64 GNU/Linux I tried to update the current version of R (2.6.2) which was installed locally as an rpm $R --version R version 2.6.2 (2008-02-08) Copyright (C) 2008 The R Foundation for Statistical Computing ISBN 3-900051-07-0 I used yum to

Hi, I am wondering where the library file for R's nmath routines are? Doing a search on libR gave me the following: /usr/lib/libRKC16.so.1.2.0 /usr/lib/libRKC.so.1.2.0 /usr/lib/R/lib/libRlapack.so /usr/lib/R/lib/libR.so /usr/lib/libRKC.so.1 /usr/lib/libRKC16.so.1 None of these have the functions in nmath. Any help? Many thanks and best wishes! GT

Hi: I followed the README in src/nmath/standalone/ to make the use the command "make shared" to make the libRmath.so file. I also add the directories containg libRmath.so to LD_LIBRARY_PATH by using command "export D_LIBRARY_PATH=$LD_LIBRARY_PATH:$/home/zhliu/Backup/R-2.0.1/src/nmath/standalon e " However, when I try to run the following codes by the command

Hi: I followed the README in src/nmath/standalone/ to make the use the command "make shared" to make the libRmath.so file. I also add the directories containg libRmath.so to LD_LIBRARY_PATH by using command "export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$/home/zhliu/Backup/R-2.0.1/src/nmath/standalon e " However, when I try to run the following codes.

Hi ! 1) First question. Excuse me for trouble with the same question. I still have problems with the compilation of test.c in src/nmath/standalone. I did follow the instructions you gave me but I still receive this message [root at my standalone]# cc -o test test.c -L/usr/local -lRmath /usr/local/libRmath.so: undefined reference to `log' /usr/local/libRmath.so: undefined reference to

Linking my VC++ application with the standalone Rmath library yields the following; ------ Build started: Project: Complex plugin, Configuration: Debug Win32 ------ Linking... Creating library .\../Debug/complex_plugin.lib and object .\../Debug/complex_plugin.exp libRmath.a(mlutils.o) : warning LNK4217: locally defined symbol __iob imported in function _REprintf libRmath.a(dbeta.o) :

Rgraphviz Install works fine (http://www.bioconductor.org/packages/release/bioc/html/Rgraphviz.html) Latest version of graphviz is installed as well however I get following error when loading Rgraphviz (on Mac 10.6.2) Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared library '/Users/jb/Library/R/2.9/library/Rgraphviz/libs/i386/Rgraphviz.so':

I see Rmath.h in include. Why can't I find libRmath.a and/or libRmath.so? -- View this message in context: http://r.789695.n4.nabble.com/where-is-libRmath-a-libRmath-so-tp2216048p2216048.html Sent from the R devel mailing list archive at Nabble.com.

In the hope of some meaningful response and ignoring the risk of further abuse, let me try to clarify the issue here. I have re-read the 'Writing R Extensions' manual. It seems to me that it clearly says R API functions can be called from from C++ programs, and the API includes the special values ISNAN() and R_FINITE() and the missing test ISNA(). R_FINITE is no problem. It is

Hi I got a very tricky problem when I tried to compile a C++ program which links to libRmath.so. The program itself had no problem, I can compile and run in my own linux machine where I compiled libRmath.so file and copied it to system directory (/usr/local/lib). Now I want to compile my program at another linux box where I don't have root privilege. That machine only has binary version of R,

Hi, I haven't used my system in a while now and wanted to update R. Running yum update R fails because of missing dependency texinfo-tex I have installed the EPEL yum repo configurations but yum install texinfo-tex does not find the package. How can I install that missing package? Any help is appreciated. Thanks. -Christos ## =========================================== [root at localhost

Hello R developers, I am working on the "seqinr" package and I encounter a tricky problem using a C function. We defined a C fonction called "getzlibsock" which is dedicated to compressed socket connections. This function is using the R internal C function called "getConnection(int)" in order to get information about the socket previously opened with the

Hi, I installed RSPerl (RSPerl_0.91-2.tar.gz) and after loading the library I get a buffer overflow. below is the output from R and below that the messages during the installation. Its on an AMD opteron system running Fedora Core5 R version 2.4.1 (2006-12-18). Thank you very much for your help. Ido > sessionInfo() R version 2.4.1 (2006-12-18) x86_64-redhat-linux-gnu locale: