similar to: subsetting

Sorry that I was unclear. For an individual to qualify for my analysis I want both of the following two criteria to be fulfilled: First, I want to select measurement taken at a certain age: for the focal individual the year of measurement (year) should be the same as year.hatch Second, I want the focal individual to be born by a mother that reproduces for the first time. So the /parents /of

Dear all, I was wondering if anyone could help solve a problem of a missing interaction effect!! I carried out a 2 x 2 factorial experiment to see if eggs from 2 different locations (Origin = 1 or 2) had different hatching success under 2 different incubation schedules (Treat = 1 or 2). Six eggs were taken from 10 females (random = Female) at each location and split between the treatments,

Hello, everyone. I'm hoping to prevent myself from doing a lot of pointing and clicking in Excel. I have a dataframe of bird nest check observations, in which I know the date of the first check, the date of the second check (both currently in Julian date format), the status of the nest at the second check (alive or failed), and the date that the nest hatched (i.e. changed from Incubation

Dear Listers, I am drawing a plot of two density curves, for male and female incomes. I would like to shade/hatch/color (whatever) the areas under the curves which are distinctive for each gender. This is the code I have tried so far: m <- density(topmal.d$y, bw = "sj") f <- density(topfem.d$y, bw = "sj") par(mfrow = c(1,1)) plot(x = c(0,400), y = c(0,0.02), type =

Dear R users, I am trying to fit a GLMM using lmer to a dataset where the brood identity (LNRREIR) is nested within mothers identity. The reason for this is that each mother can have several nests within each year and also between years. I am running the following script (actually I have tried all different combinations with LNRREIR and mother): mod <- lmer(sr~z.hatchday +

Hi all, I wonder if anyone can help, I have a dataframe with columns for... 'I.D' 'age' 'mothers I.D' 01 5 03 02 6 06 03 16 NA 04 8 06 05 3 NA 06 17 NA I need to create a new column for 'mothers age' which puts the age of the individual with 'mothers i.d' into the row for her offspring (so

Hello, Im reading through some manuals, but I cannot find my answer. I have a file containing many data: Vpn Code Family Age F1 F2 ... F17 1 1 M 46 1 2 ... 1 2 1 D 18 3 2 ... 4 3 2 M 50 3 3 ... 3 ... and so on. Now I can read it by: F = read.table("file", header=T) but now I want to seperate the mothers (M) and daugthers (D) of the family with all the data in all other fields.

Dear R-experts, Quite new to R on this end, but learning fast (I hope). I am running version 2.7.1 on Windows Vista. I have small dataset which consists of: # NestID: nest indicator for each chicken. Siblings sharing the same nest have the same nest indicator. # Chick: chick indicator consisting of a unique ID for each single chick. # Year: 1, 2. # ClutchSize: 1-, 2- , 3-eggs. # HO:

Dear R-experts, I am running R version 2.7.1 on Windows Vista. I have a small dataset which consists of ?chick ID?, ?year (0, 1)?, ?hatching order [HO, defined as first, second and third-hatched chick]?, and the binary outcome of interest ?death (0, 1)?. So a subset of my dataset looks like this on a txt file: y ID Yr HO 1 1 1 First 0 2 1 First 0 3 1 Second 0 4 1 First 1 5 1 First 0 6 1 Third

Hi all, I was wondering whether anyone could guide me to docu and code examples how to create and use a has_and_belongs_to_many relationship with a joining table where TWO columns are used to identify the relation to TWO alternative tables. Example: table 1: mothers [mother_id, name] table 2: fathers [father_id, name] table 3: children [child_id, name] joining table 4: children_parent

I'd like to annotate an xyplot with an R^2 value, but can not find the syntax to define the superscript format for the text. I'd appreciate suggestions, xyplot(SharkSloughEggs.df$Sharkeggs.rel + SharkSloughEggs.df$SharkHatched.rel + SharkSloughEggs.df$SharkFlooded.rel + HSI.shark$MEAN ~ Year, pch=c(1,9,5,4), lty=c(1,6,3,4), lwd = c(2), col = c("black",

Dear list, i'm a new R user, so I apologize if the topic is already being addressed by some other user. I'm trying to determine if the reproductive success of a species of bird is related to a list of covariates. These are the covariates: ? elev: elevation of nest (meters) ? seadist: distance from the sea (meters) ? meanterranova: records of temperature ? minpengS1: records

I am involved in a study where, as in most of life, men demonstrate themselves to be recalcitrant. So while we have many probands and most of their mothers we only have about 50% of the trios being complete. I have been running tdt and trio.types. It appears as if it is ignoring the duos. Sometimes a duo can be informative. For instance Father ..missing Mother 1/2 Proband 1/1 This duo shows that

Dear all, I'm struggling with a plot and would value any help! I'm attempting to highlight a histogram and density plot to show a proportion of cases above a threshold value. I wanted to cross-hatch the area below the density curve. The breaks and bandwidth are deliberate integer values because of the type of data I'm looking at. I've managed to do this, but I don't think it

Hi, can anyone help me fit betabinomial model to the following dataset where each iD is a cluster in itself , if i use package aod 's betabinom model it gives an estimate of zero to phi(the correlation coeficient ) and if i fix it to the anova type estimate obtained from icc( in package aod) then it says system is exactly singular. And when i try to fit my loglikelihood by

Hi there. I have now found that dist() does what I want in a specific case. But I have (out of many fields) in my Fragebogen.data file: Vpn Code Family Test 1 X1 m 45 2 X1 t 58 3 X2 m 44 4 X2 t 43 ... When I now do: Fbg <- read.table("Fragebogen.data", header=TRUE) dist(Fbg['Test']) I have the distances between everyone to everyone. Now I want to have the mothers (m in

Hello dear members of R-help and R-core mailing list, I am not sure if this request is a "ticket" that should be filled somewhere outside the mailing list. If so, I apologize for not doing and would like to know where I should have filled it. And to the subject matter: I would like to use a command like this: plot(c(1,8), 1:2, type="n") polygon(1:7, c(2,1,2,NA,2,1,2),

Hello dear members of R-help and R-core mailing list, I am not sure if this request is a "ticket" that should be filled somewhere outside the mailing list. If so, I apologize for not doing and would like to know where I should have filled it. And to the subject matter: I would like to use a command like this: plot(c(1,8), 1:2, type="n") polygon(1:7, c(2,1,2,NA,2,1,2),

Dear Sir, I am using the following cos which creates a 3 panel figure on one image. However the legend function i am using only allows the legend to be placed within the axes of one of the graphs. The plots however do not allow for a logend to be places within the axes do to the location of points on the graph. I can add the legend later using imaging software such as paint but i lose

Hi R-people: I need a function to compute the number of months between 2 dates, in the same way a mother would do it. For example, if a kid is born on February 6, the number of months between that date and March 7 is exactly 1 month, although it is only 29 days. Thank you! Phil Smith CDC [[alternative HTML version deleted]]