similar to: Problem with two libraries

R version 2.7.0 Under development (unstable) (2008-03-04 r44677) i386-apple-darwin8.10.1 locale: C attached base packages: [1] grid grDevices datasets graphics stats utils methods base other attached packages: [1] lattice_0.17-6 MASS_7.2-41 JGR_1.5-18 iplots_1.1-2 JavaGD_0.5-1 rJava_0.5-1 The following opens a JavaGD window and freezes JGR: super.sym <-

> mypal <- trellis.par.get('superpose.line')$col[1:2] > mycol <- mypal[1] > trellis.par.set(list(dot.symbol = list(pch = 16, cex = 1.5))) > dotplot(1:6 ~ audRating, data = txtA.ci, + scales = list(y = list(at = 1:6, labels = txtA.ci$pitchAud, col = 'black', cex = 1.1)), + ylab = '', aspect = 1.2, xlab = 'rated duration', ylim = c(0.5,

Dear R-helpers, I tried the playwith packages for the first time, and it crashed R: > require(playwith) Loading required package: playwith Loading required package: lattice Loading required package: grid Loading required package: gWidgets Loading required package: gWidgetsRGtk2 Loading required package: RGtk2 Loading required package: cairoDevice > sessionInfo() R version 2.7.1

> > Message: 107 > Date: Tue, 12 Sep 2006 05:25:09 -0400 > From: Michael Kubovy <kubovy at virginia.edu> > Subject: Re: [R] Reading fixed column format > To: Anupam Tyagi <AnupTyagi at yahoo.com> > Cc: r-help at stat.math.ethz.ch > Message-ID: <3EBEC9D3-559C-4607-838D-46042D36A3AA at virginia.edu> > Content-Type: text/plain; charset=US-ASCII;

Dear R-helpers, How do I transform v <- c('insd-otsd', 'sppr-unsp') into c('insd--otsd', 'sppr--unsp') ? _____________________________ Professor Michael Kubovy University of Virginia Department of Psychology USPS: P.O.Box 400400 Charlottesville, VA 22904-4400 Parcels: Room 102 Gilmer Hall McCormick Road Charlottesville, VA 22903

Take a look at the "scales" argument in dotpolot. Maybe you need something like: position<-exp(-5:0)/(1+exp(-5:0)) dotplot(type~freq/(3027-freq), scales=list(x=list(log=T, at=position, lab=round(position, 3))) ) Stefano >-----Messaggio originale----- >Da: r-help-bounces at stat.math.ethz.ch >[mailto:r-help-bounces at stat.math.ethz.ch]Per

Dear R-listers, Can someone suggest a method for generating a finite Bernoulli sequence that is likely to have a given point-biserial correlation with an existing Bernoulli sequence? _____________________________ Professor Michael Kubovy University of Virginia Department of Psychology USPS: P.O.Box 400400 Charlottesville, VA 22904-4400 Parcels: Room 102 Gilmer Hall

Dear r-helpers, I downloaded http://popgen.unimaas.nl/~jlindsey/rcode/rmutil.tar (it was originally .tgz, but got unzipped by my browser). Can anyone give me detailed instructions on installing this and Lindsey's other packages on R version 2.4.0 (2006-10-03)---(powerpc- apple-darwin8.7.0, locale: C)? _____________________________ Professor Michael Kubovy University of Virginia

Dear R-helpers, How do I tell panel.polygon what greoup and panel it applies to whithin xyplot(y ~ x | c, groups = g panel = function(x, y, groups, ...){ panel.polygon(x = xpol[c, g], y = ypol[c, g], default.units = 'native') panel.xYplot(x, y, groups, ...) llines(x = c(1, 6), y = c(-24.283333, 35.941667), lwd = 2, lty = 3, col = 4) } x[c, g] and y[c, g] describe

Dear R-helpers, I would like the bands in an xYplot() to be gray without dark edges. I've tried playing around with col.bands, but that seems not to affect the edges, although changin col.fill does change the fill as I would expect. I would appreciate pointers. _____________________________ Professor Michael Kubovy University of Virginia Department of Psychology USPS: P.O.Box

Dear r-helpers, After updating to R version 2.2.1, 2005-12-20, powerpc-apple- darwin7.9.0 (from binary), JGR wouldn't launch. I then deleted everything I could find related to JGR, and reinstalled it from the latest binary. Both R and JGR are installed in /Applications/ \~LocalApps/mathStat/. Advice on how to identify the source of the problem? My machine: Machine Name:

Dear r-helpers, When use latex() on a matrix, I set the option dcolumn = T. As a result, in front of each tabular I get \newcolumntype{.}{D{.}{.}{-1}} The LaTeX compiler complains about these multiple redeclarations. _____________________________ Professor Michael Kubovy University of Virginia Department of Psychology USPS: P.O.Box 400400 Charlottesville, VA 22904-4400 Parcels: Room

Dear Friends, Please note that in the following CI lower > CI higher: > require(lmer) > require(gmodels) > fm2 <- lmer(Reaction ~ Days + (1|Subject) + (0+Days|Subject), sleepstudy) > ci(fm2) Estimate CI lower CI upper Std. Error p-value (Intercept) 251.66693 266.06895 238.630280 7.056447 0 Days 10.52773 13.63372 7.389946 1.646900

Dear R-helpers, This produces a red title. How do I make it black, without making the labels black? legend(title = 'Channel Integration', 0.7, 0.3, c('loudness','luminance'), col = c('red', 'blue'), text.col = c('red', 'blue'), lty = 1, xjust = 0.5, bty = 'n') _____________________________ Professor Michael Kubovy University

Dear R-helpers, I need to generate all the binary sequences of length n (here n = 8) that start with 1 and have no fewer than two of each digit, and are not cyclic permutations of each other. Here is what I have done: len <- 8 df <- as.data.frame(numeric(2^(len - 1)) %o% numeric(len)) require(partitions) for (i in 1:2^(len - 1)) df[i, ] <- binary(i, dim = len)[[1]] df <-

Here's a small dataset: type <- c('hierarchical','partial','single','complete','single +hierarchical','single+partial','partial+hierarchical','single+partial +hierarchical') freq <- c(1455,729,688,65,29,28,16,17) lodds <- log(freq/(3027 - freq)) dotplot(type~lodds) I would like to have the x-axis have ticks at nice,

How does one define PDFs as yet undefined in R, such as the ex- gaussian, the sum of two RVs, one exponential, one Gaussian? The PDF would then be the convolution of an exponential PDF, dexp(), and a normal, dnorm(). Kindly cc me in your reply to r-help. Thanks, _____________________________ Professor Michael Kubovy University of Virginia Department of Psychology USPS: P.O.Box 400400

Dear r-helpers, Could you please help me solve the following problem: When I run require(AlgDesign) trt <- LETTERS[1:5] blk <- 10 trtblk <- 3 BIB <- optBlock(~., withinData = trt, blocksizes = rep(trtblk, blk)) In response to the last command, R complains: Error in optBlock(~., withinData = trt, blocksizes = rep(trtblk, blk)) : object ".Random.seed" not found The

> (fm1 <- lmer2(Reaction ~ Days + (Days|Subject), sleepstudy)) Error in as.double(start) : Calloc could not allocate (888475968 of 4) memory ************************* > sessionInfo() R version 2.4.1 (2006-12-18) powerpc-apple-darwin8.8.0 locale: C attached base packages: [1] "grid" "datasets" "stats" "graphics" "grDevices"

Dear R-helpers, I'm trying to selectively swap labels between two factors, depending on an indicator variable i. Can you point me to a solution, and perhaps how I could have found it? labels(fact1) is a character vector of r row numbers levels(fact1) is a character vector of the n < r unique levels How do I then get the character vector of length r of the levels of fact1? Once I have