similar to: Beginners manual for emacs and ess

Displaying 20 results from an estimated 8000 matches similar to: "Beginners manual for emacs and ess"

2006 Sep 06
4
problem with putting objects in list
Hi I use the following code and it stores the results of density() in the list dr: dens <- function(run) { density( positions$X[positions$run==run], bw=3, cut=-2 ) } dr <- lapply(1:5, dens) but the results are stored in dr[[i]] and not dr[i], i.e. plot(dr[[1]]) works, but plot([1]) doesn't. Is there any way that I can store them in dr[i]? Thanks a lot, Rainer -- Rainer M. Krug,
2006 Sep 20
4
Calculating mean together with split
Hi I have a table called npl containing results of simulations. It contains about 19000 entries and the structure looks like this: NoPlants sim run year DensPlants 1 6 lng_cs99_renosterbos 1 4 0.00192 . . . it has 43 different entries for sim and year goes from 1 to 100, and run from 1 to 5. I would like to calculate the mean of DensPlants for each
2006 Dec 01
2
specify point shape for ggplot (equivalent to pch)?
Hi is it possible to specify the shape of the point to be used in ggplot (as with pch in plot)? I couldn't find anything in the help. Thanks Rainer -- Rainer M. Krug, Dipl. Phys. (Germany), MSc Conservation Biology (UCT) Department of Conservation Ecology and Entomology University of Stellenbosch Matieland 7602 South Africa Tel: +27 - (0)72 808 2975 (w) Fax: +27 - (0)86 516 2782 Fax:
2006 Sep 22
1
Update to Dillo browser question
Hi I asked about if there is any way of opening URLs from the help browser in the same window of the same dillo browser - here is the answer. Just to reiterate: dillo is for me the perfect browser for the help of R when you use ?... Rainer -------- Original Message -------- Subject: Re: [Dillo-dev] Opening new URL in same instance and -s option Date: Thu, 21 Sep 2006 21:31:57 -0400 From:
2006 Oct 25
3
simplification of code using stamp?
Hi I have the following code which I would like to simplify. Id does linear regressions and returns the r-squares, and the coefficients. It runs slow, as it is doing the regressions for each - is it possible to get the values in a dataframe which looks as follow: expert | xx | seeds | r.squared | slope | intercept Thanks in advance, Rainer library(reshape) rsqs <- as.data.frame(
2006 Sep 21
1
transforming factor back to numbers
Hi I generate a new dataframe by doing: npl.agg <- aggregate(npl$DensPlants, list(year=npl$year, sim=npl$sim), mean, na.rm=TRUE ) Now I want to plot it by using coplot(npl.agg$x ~ npl.agg$year | npl.agg$sim, type="l") but, as npl.agg$year is seen as a factor, the order of the points on the x-axis (time axis) does not follow the numerical sorting 1...100, but rather the text
2006 Nov 01
1
Compare linear regressios for significant differences of the slopes
Hi I have (8 measures * 96 groups) = 768 datasets for which I did linear regressions using lm(). Now I want to compare the slopes for each of the 8 measures in each of the 96 groups. As I understand , I can not use > anova(lm1, ..., lm8) as the lm1 ... lm8 are based on different datasets. I also read in previous discussions in this list, that I can see if the slope +- stddev(slope)
2006 Aug 30
2
density() with from, to or cut and comparrison of density()
Hi the function density() does normally integrate to one - I've checked it and it works and I also read the previous threads. But I realised that it does not integrate to one if I use from, to or cut. My scenario: I simulated densities of a plants originating from an sseed source at distance zero. Therefore the density of the plants will be highest close to zero. Is there anything I can do
2005 Dec 20
1
Problems installing R 2.1.1. from rpm (R-base-2.2.0-1.i586.rpm) on SuSE 10
Hi I have problems installing R 2.1.1. from rpm (R-base-2.2.0-1.i586.rpm) on SuSE 10. It installs fine, all dependances are OK (at least Yast does not complain) but when I try to run R, it gives the following error message: symbol lookup error: /usr/lib/libblas.so.3: undefined symbol: _gfortran_filename and R quits. blas version: 3.0-926 Any help appreciated, Rainer -- -- Rainer M.
2005 Oct 26
1
install.packages under SuSE 10 behind proxy, R 2.2.0 from source
Hi I installed R 2.2.0 from source and want to use install.packages but it doesn't work. http_proxy is set to http://proxy.sun.ac.za:3128 but it still can't connect to the repository. The mirror is available, I can connect to it via the internet. Any help welcome, Rainer -- NEW TELEPHONE NUMBER Tel: +27 - (0)72 808 2975 (w) Rainer M. Krug, Dipl. Phys. (Germany), MSc
2006 Mar 23
4
Create graphs from text console
Hi I am using R 2.2.1 under Linux (SuSE 10) and would like to know if it is possible to create graphs, i.e. jpeg(filename=fn) try( coplot( mor$I_Morisita ~ mor$Year | mor$RunStr, show.given=FALSE) ) dev.off() from a text console? It gives me an error message on the jpeg() command: Error in X11(..snip..) unable to start device jpeg In addition: warning message: unable to open connection to
2005 Oct 10
3
Vectorizing loop
Hi I have the following loop and would like to vectorize it. Any ideas if it is possible? Thanks, Rainer Tha Loop: for (i in 2:Result$NoSims) { ppp <- runifpoint(Result$NoPlants) K <- Kest(ppp) Result$LSim[i,] <- sqrt(K$iso / pi) - K$r CM <- (Result$LSim[i,] * Result$LSim[i,]) / abs(K$r[2] - K$r[1]) Result$SigCM[i] <- sum(CM, na.rm=TRUE) print(i) flush.console() }
2005 Dec 15
2
Why is bubbles() creating empty png graphs?
This code below produces empty XXX.png files - if I use plot(), it works and if I enter the commands png(filename=fn) bubble(positions, do.sqrt=FALSE, main=q) dev.off() manually, it works as well. I am lost - any help appreciated. The weird thing is that it worked before I made some changes... (I don't have a copy of the working version...). R version: platform i686-pc-linux-gnu arch
2006 Jan 09
2
Problem with WineTools - unexpected identifier
Hi I try to run WineTools, It starts fine, but when I click any button (e.g. Basic Setup), it gives me the following message and returns to the main menu: ------------------------ ckrug@consecol-ckrug:~> wt detecting Wine version... done. Drive C: is /home/ckrug/.wine/drive_c Wine 0.9.3 wine is executed as wine Parameters are --noexit Browser is /usr/bin/firefox. WINEVER is
2006 Apr 28
2
fixme:imm:ImmReleaseContext message - what should I do?
Hi When I run a program I've written with Delphi7, I get several of the following messages: fixme:imm:ImmReleaseContext (0x10020, 0x403b9e80): stub . . . The program works - but is there anything I can do to avoid these messages? Rainer -- Rainer M. Krug, Dipl. Phys. (Germany), MSc Conservation Biology (UCT) Department of Conservation Ecology and Entomology University of Stellenbosch
2006 Mar 10
4
How to get the intercept from lm?
Hi I am using R 2.2.0 under SuSE 10 I want to use lm() to get the slope and intercept for several daatasets and store them in a database. So far so good - but how do I extract the slope and the intercept from the result from lm()? my code looks like this: lmNNDens <- lm(log(DensNN$MeanNN) ~ log(DensNN$MeanDensity)) anovaLM <- anova(lmNNDens) Results$slope[No] <- ???lmNNDens???
2006 Dec 13
2
exporting a table to latex
Hi I am using the latex() command from the Hmisc package to export table to latex. For formating of the values, I use the format() function. But I don't manage to get the format of the values right: I don't want scientific notation, but if I say scientific=FALSE, I get many digits after the decimal point which I can not control with digits=... and nsmall=... in the format command.
2006 May 23
1
SmartInspect Personal crashes kwin under Wine 0.9.13
Hi System: SuSE 10.0 KDE Release 3.5.2 Level "a" Wine 0.9.13 SmartInspect Personal 1.1.0.597 I installed SmartInspect Personal 1.1.0.597 under Wine 0.9.13 and it works perfect. There is only on problem, but it doesn't influence the usage - but when it happens, I have to logout (if still possible) and logon again: If I click on Help - About, the About window shows (it seems to be
2006 Nov 10
1
Combining factors
Hi I know this is a basic question and I know I have done it before but I can't find the answer any more. I have a data set, say: F1, F2, Value F1 and F2 are Factors. I would like to plot plot(TheCombinationOf(F1, F2), Value) I remember there was a function for TheCombinationOf() but I don't remember the name. I could create a new factor based on F1 and F2, but I would prefer the
2006 Dec 14
7
loop is going to take 26 hours - needs to be quicker!
Dear R-help, I have a loop, which is set to take about 26 hours to run at the rate it's going - this is ridiculous and I really need your help to find a more efficient way of loading up my array gpcc.array: #My data is stored in a table format with all the data in one long column #running though every longitute, for every latitude, for every year. The #original data is sotred as