similar to: gluster fuse disk state problem (reproducible ), kind of solved

I think I have the same problems as: http://gluster.org/pipermail/gluster-users/2011-June/007980.html and http://gluster.org/pipermail/gluster-users/2011-May/007697.html Recently I installed Glusterfs 3.2.0 on four workstations which share a total of 28TB of disk-space between them for batch processing of FMRI and DTI data. Had the same setup between three workstations and 9TB with Glusterfs

Dear BioConductor and R fellow users I apologize in advance for double posting, but I am not sure which list would actually be best fit for this message. I am experiencing a weird error with my R installation on Ubuntu 10.04.4 (LTS) 64bit: When I run R on the terminal everything goes smoothly: $R R version 2.15.2 (2012-10-26) -- "Trick or Treat" Copyright (C) 2012 The R Foundation

I am trying to write a dynamic linked library for R, in Pascal. (This is to speed up the execution of a simulation that I am running in R.) I know Pascal might not be the perfect language for this (C or Fortran being more natural), but from what I have read I think it should work. Though I should point out that I am a neophyte when it comes to DLLs. From R I want to hand a function in

Thanks for your help with this problem about dynamic linked libraries. I thought I had it solved, but apparently not. Below is a small piece of Pascal code that I compile into a library. When I load the library using dyn.load R becomes very unstable. The Mac GUI crashes in all kinds of situations --even moving a window can sometimes crash it. Running from the command line (I thought the

I was not sure who I should contact about this, so I am posting this here. There are a few broken links on the R website. 1) http://www.r-project.org/search.html -> link to the Nabble R Forum. I belive the correct/new URL should be: http://r.789695.n4.nabble.com/ 2) http://www.r-project.org/other-docs.html -> link to "Auswertung ?kologischer Daten". Not sure if there is a new

Hi BioC user, I have a problem extracting the gene set I would like to work with. Here is I work with my data: normData <- read.delim("normalizedData.txt",sep ="\t") ######### two class unpaired comparison # y must take values 1,2 classes <- c(-1,-2,1,2) #prepere the data for the samr analysis data.x <-as.matrix(normData[,8:11]) d=list(x=data.x,y=classes,

Hi everybody, I am a new user of R, design package. I am trying to plot the estimated hazard ratio's of my cox regression model with the confidence intervals. But I keep getting the message:Error in `contrasts<-`(`*tmp*`, value = "contr.treatment") : contrasts can be applied only to factors with 2 or more levels I have dichotomous, categorical as well as continuous

Dear Dushanthi, Please keep your e-mails on the R-Help list, where Michael has already given you some excellent advice. As Michael already explained, metafor can handle proportions, but does not have any specific functionality for categorical variables with more than 2 levels (at the moment). So, if it is logical and possible to do so, you could collapse the levels of the categorical outcome to 2

In an experimental setup we obtain z-data samples at equidistant grid points. The surf.gls (Kriging) algorithm produces an error under this circumstance when performing the Choleski decomposition. A workaround is to dither the grid coordinates using (x <- rnorm(length(x)) ; y<- rnowm(length(y))). Question: Is this an expected behaviour of the surf.gls function ? Regards, Berthold

Thanks Andris, Michael and Petr for your prompt and kind feedbacks. I will try generating my own biplot from low-level graph commands... I hope it will work. Best regards, Marco -- Marco Manca, MD University of Maastricht Faculty of Health, Medicine and Life Sciences (FHML) Cardiovascular Research Institute (CARIM) PO Box 616 6200 MD Maastricht E-mail: m.manca at path.unimaas.nl Office

Hello. I am getting results from sem that are not correct (that's assuming that the results from my AMOS 4.0 software are correct). sem does not vary some of the parameters substantially from their starting values, and the final estimates of those parameters as well as the model chisquare value are incorrect. I've attached some code that replicates the problem. The parameters in

Hi... Isn''t there a proper way or hack/workaround for the following? * For the example with unfortunate disabilities.. look below,,, Usage of has_* (associationmethods) do {def with_deleted AccociatedModel#with_scope} {Paranoid''s#find_with_deleted}... The has_one associations give me a nil object when invoking it with Model.association_OBJECT.with_deleted. Has_many does like

Hello, Dr. Viechtbauer. I am trying to perform a meta-analyis on a group of before-after studies using Metafor. I read your webpage including your correspondence with Dr. Dewey (https://stat.ethz.ch/pipermail/r-help/2012-April/308946.html), who also conducted a similar study. These information is very hepful, but I have one additonal question which I wonder if you can give me some instruction.

Dear All, Suppose I want to write a method for the generic function confint(): > args(confint) function (object, parm, level = 0.95, ...) So, it looks like the second and third argument have been predefined in the generic function. Suppose one or several of the predefined arguments don't apply or fit (in some sense) with the design of the rest of the package. What should one do? I see

I currently have a few CentOS 5.2 based Xen clusters at different sites. These are built around a group of 3 or more Xen nodes (blades) and some sort of shared storage (FC or iSCSI) carved up by LVM and allocated to the domUs. I am "managing" the shared storage (from the dom0 perspective) using cman+clvmd, so that changes to the LVs (rename/resize/create/delete/etc) are

Dear All, I have been checking the metafor package against R-devel. R CMD check --as-cran metafor yields one note: FOSS licence with BuildVignettes: false Yes, I have 'BuildVignettes: FALSE' in my DESCRIPTION file. I see at http://developer.r-project.org/blosxom.cgi/R-devel/NEWS: Tue, 25 Jun 2013 CHANGES IN R-devel UTILITIES 'R CMD check --as-cran' warns about a false

First of all, let me apologize, as this is probably an absurdly basic question. I did search before asking, but perhaps my ineptitude didn't allow me to apply what I read to what I'm doing. Totally new to R, and haven't done any code in any language in a long time. Basically I've got categories. They're department codes for doctors (say, 9999 for radiology or 5555 for

Hi All, I am compiling R-devel on Linux (Ubuntu 16.04.2) and that works just fine, but I am missing some of the expected features, as shown here: https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Linux In particular, after configure (using all defaults), I see: R is now configured for x86_64-pc-linux-gnu [...] Interfaces supported: X11 External libraries:

I have a sun machine (solaris 8) with R 1.3.0 installed. I want to install tcltk libraries to add gui support. Could someone please point me to the appropriate instructions? Thank you for your help. -- John CAREW <carew at mr.radiology.wisc.edu> Functional MRI Research Group Radiology E3/311 600 Highland Ave. Madison, WI 53792-3252 Phone: (608)265-5742 Fax: (608)265-9840

Thank you. This is a very useful idea! Best, Ravi ________________________________ From: R-devel <r-devel-bounces at r-project.org> on behalf of Viechtbauer, Wolfgang (SP) <wolfgang.viechtbauer at maastrichtuniversity.nl> Sent: Thursday, April 30, 2020 6:59:02 AM To: r-devel Subject: Re: [Rd] Use of MathJax (or something similar) in .Rd files Thanks Gabor and Duncan! It works.