Displaying 6 results from an estimated 6 matches similar to: "A couple of questions regarding the survival:::cch function"
2008 Jun 12
1
cch function and time dependent covariates
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In case cohort study, we can fit proportional hazard regression model to
case-cohort data. In R, the function is cch() in Survival package
Now I am working on case cohort analysis with time dependent covariates
using cch() of "Survival" R package. I wonder if cch() provide this utility
or not?
The cch() manual does not say if time dependent covariate is
2008 Jun 16
1
回复: cch() and coxph() for case-cohort
I tried to compare if cch() and coxph() can generate same result for
same case cohort data
Use the standard data in cch(): nwtco
Since in cch contains the cohort size=4028, while ccoh.data size =1154
after selection, but coxph does not contain info of cohort size=4028.
The rough estimate between coxph() and cch() is same, but the lower
and upper CI and P-value are a little different. Can we
2008 Jun 12
0
case-cohort
Jin Wang had an error. My original note specified a variable that was 1 for
subjects NOT in the subcohort, so the correct coxph call is
coxph(Surv(edrel, rel) ~ stage + histol + age +
offset(-100*(subcohort==0)) + cluster(seqno), data =ccoh.data)
This gives the same coefficients as the cch example, along with the
infinitesimal jackknife or "robust" variance estimate.
2008 Jul 15
0
implementation of Prentice method in cch()
Case cohort function cch() is in survival package. In cch(), the prentice
method is implemented like this:
Prentice <- function(tenter, texit, cc, id, X, ntot,robust){
eps <- 0.00000001
cens <- as.numeric(cc>0) # Censorship indicators
subcoh <- as.numeric(cc<2) # Subcohort indicators
## Calculate Prentice estimate
ent2 <- tenter
ent2[cc==2] <-
2007 Jun 07
1
MITOOLS: Error in eval(expr, envir, enclos) : invalid 'envir' argument
R-users & helpers:
I am using Amelia, mitools and cmprsk to fit cumulative incidence curves
to multiply imputed datasets. The error message that I get
"Error in eval(expr, envir, enclos) : invalid 'envir' argument"
occurs when I try to fit models to the 50 imputed datasets using the
"with.imputationList" function of mitools. The problem seems to occur
2008 Jun 16
0
cch() and coxph() for case-cohort
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I tried to compare if cch() and coxph() can generate same result for
same case cohort data
Use the standard data in cch(): nwtco
Since in cch contains the cohort size=4028, while ccoh.data size =1154
after selection, but coxph does not contain info of cohort size=4028.
The rough estimate between coxph() and cch() is same, but the lower
and upper CI