similar to: create a color palette with custom ranges between colors

Hi, i created a graph with heatmap(sma) function: heatmap(dataHeat(x)) and I wish to change the gradation of colors from blue to red, how could i do? Using "heatmap(dataHeat(x), col=c(2,4))" i will use only 2 colors without gradation. Ty so much Andrea

I'm working on some heatmaps, and the person I'm working with would prefer a red-black-green color palette (red denoting gene induction and green denoting gene repression). Does such a palette exist already? If not, is there an easy way to create one? Thanks, Jake

Own Color Palette Dear all,<?xml:namespace prefix = o ns = "urn:schemas-microsoft-com:office:office" /><o:p></o:p> I would like to generate a contour-plot according to a master plot. The problem is that the rainbow-palette included in R does not answer this purpose. I need a darker blue, no turquoise, relatively less green, more yellow and more red. Haw can I adjust

Dear List, Is there a color palette avaliable similar to what is used in satellite ocean color imagery? I.e. a gradient with blue on one end and red on the other, with yellow in the middle? I have tried topo.colors(n) but that comes out more yellow on the end. I am looking for something similar to what is found on the CoastWatch web page:

Dear useRs, I got stuck trying to generate a palette of topographic colors that would satisfy these two requirements: - the pallete must be 'anchored' at 0 (just like on a map), with light blue/lawn green corresponding to data values close to 0 (dark blue to light blue for negative values, green-yellow-brown for positive values) - the brown must get darker for higher positive

Hi, I have a matrix with both positive and negative numbers, I would like to use image() to draw a heatmap. How can I can design a palette (or is there a function already available) that treat negative numbers in a blue gradient and positive numbers in a red gradient and treat 0 as white? Thanks

Hi All, I am looking for a color palette like this: http://www.ncl.ucar.edu/Applications/Images/h_long_5_lg.png I think I found out how some time ago (something like Colors[1:n]), but when I now wanna use it, I could not remember how I did it. Does anyone know which package I could use? Many thanks! Linda [[alternative HTML version deleted]]

Hi All, I am looking for a color palette like this: http://www.ncl.ucar.edu/Applications/Images/h_long_5_lg.png I think I found out how some time ago (something like Colors[1:n]), but when I now wanna use it, I could not remember how I did it. Does anyone know which package I could use? Many thanks! Linda [[alternative HTML version deleted]]

Hi, I hope to show a heatmap with thre colours, no gradation. How to specify heatmap.2 to map "green" for values less than -1, "gray" for values between -1 and 1, and "red" for values greater than 1 ? Thanks [[alternative HTML version deleted]]

Dear list I'm having trouble with inverting color gradation. As seen in the "rgl" example, library(rgl) example(rgl.surface) I understand that I can assign colors to heights for each point. col <- colorlut[ y-ylim[1]+1 ] # assign colors to heights for each point However, I am now trying to assign inverted colors. (top colored green, and bottom colored gray). Is there any

Hello: I have a tab delim file with 100 rows and 100 columns. I have numerical values in this table. What I want is to create an image color map with color gradation. my values range from -5 to 0. max value is 0. to acheive this, I need to convert my data.frame into matrix. I tried following : mydf <- read.table('mytable',sep='\t',header=T) mydf1 <- mydf[,2:100]

Using the small reproducible example below, I'd like to know if one can somehow use the matrix "sig" (defined below) to add a black outline (with lwd=2) to all pixels with a corresponding value of 1 in the matrix 'sig'? So for example, in the ggplot2 plot below, the pixel located at [1,3] would be outlined by a black square since the value at sig[1,3] == 1. This is my first

Full_Name: Hsiu-Khuern Tang Version: 1.8.0 OS: GNU/Linux (Debian unstable) Submission from: (NULL) (156.153.255.243) Hi, I use palette(rgb(red=..., green=..., blue=..., names=mycolors)) to define my own color palette. After doing this, the names `mycolors' are not stored in palette() anymore, so that palette() returns a mix of built-in color names and RGB values. Eg: > palette()

Is there a way to increase the "sensitivity" of the color palette in order to more clearly represent certain sections of data? For example I am wanting to clearly differentiate between height data for a rolling landscape but because of the extremes of the dataset (sea and mountain tops), the bulk of the landscape is shaded in closely approximating green - i have attempted to do this by

Dear All, [I'd already sent this message earlier (Apr 6) but as I had no response and I still see that it is the case in R1.5 I thought I'd try again] I recently encountered a problem (actually missed some data) because "white" is one of colours in the "default" palette and that does not show up to well on my transparent (on white background). Of course it is

Dear all, I'm generally not a big fan of GUIs, but I have just discovered one thing where a GUI would be a nice thing: creating color palettes. I'm creating an "image", for transparencies for a lecture I'm giving, so this is going to look great... :-) What I'm out for, is to make green tones and red tones, and a relatively sharp break between them. This break will

For many years, when my R process starts up I've been automatically setting my preferred default plot colors, basically like so: my.colors <- c("black" ,"red" ,"gold" ,"sky blue" ,"green" ,"blue" ,"orange" ,"grey" ,"hot pink" ,"brown" ,"sea green" ,"cyan"

On 16/04/2016 8:47 AM, Atte Tenkanen wrote: > Hi, > > How would you calculate the "mean colour" of several colours, for > example c("#FF7C00","#00BF40","#FFFF00")? > Bert answered your subject line question. Your text is asking something else: if those are colours, you don't want to treat each of them as a single integer. A

Try this example(palette) then trigger a redraw e.g. by resizing the window. Shouldn't the palette be stored as part of the display list? (This only happens because the palette was reset at the end of the example, but still...) -- O__ ---- Peter Dalgaard Blegdamsvej 3 c/ /'_ --- Dept. of Biostatistics 2200 Cph. N (*) \(*) -- University of Copenhagen

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