similar to: write.arff function in package foreign can't handle Date time

Hi, I am trying to read in a large and highly sparse ARFF file into R which was produced by WEKA. However the package 'RWeka' just chokes on this file. The data set has about 40k observations and about 20k dimensions. Even after 1hr read.arff method of RWeka is still trying to read in the file, whereas WEKA is able to read it in in less than 20seconds. What are my options at this

?Hello everyone, I guess this is really directed to the R Core Team, but I understand that this is the best channel to submit this (please correct me if I'm wrong!). I would like to submit a function to consideration, as an upgrade for the current read.arff in package foreign. Code in github: https://raw.githubusercontent.com/jumanbar/misc/master/R/read.arff.R This function is a modified

Simply gooling for "writing ARFF file in R" gave the following as first hit, which is right on the WEKA page: Miscellaneous code [...] Function for reading ARFF files into the R statistical package (kindly provided by Dr Craig Struble). Function for writing ARFF files from the R statistical package (kindly provided by Nigel Sim).

Running Weka's command line with calls to system(), like this > system("java weka.classifiers.bayes.NaiveBayes -K -t HWlrTrain.arff -o") === Confusion Matrix === a b <-- classified as 3518 597 | a = NoSpray 644 926 | b = Spray === Stratified cross-validation === === Confusion Matrix === a b <-- classified as 3512 603 | a = NoSpray

Hello, I have some trouble in achieving the desired parametrisation for the weka classifier functions, using the package RWeka. The problem is, that the functions result=classifier(formula, data, subset, na.action, control = Weka_control(mycontrol)) do not seem to be manipulated by the mycontrol- arguments Perhaps this should be resepected via the handlers- argument , but the

Hi all, I have been using WEKA to do some text classification work and I want to try out R. The problem is I cannot load the String to Vector ARFF files created by WEKA's string parser into Rattle . Looking at the logs I get something like: /Error in scan(file, what, nmax, sep, dec, quote, skip, nlines, na.strings, : scan() expected 'a real', got '2281}'/ *My ARFF

Full_Name: Martin C. Martin Version: 2.7.1 OS: Ubuntu Submission from: (NULL) (75.150.115.86) The function write.arff, in the foreign library: - Can produce relation names with invalid characters - Doesn't use colnames() for attribute names when writing a matrix. Here's a better version: write.arff <- function (x, file, eol = "\n") { if (file == "")

Hello: I´m trying to execute Apriori(file.arff) command of RWeka package. I´m working with: Operating System: Windows XP home R-2.4.0 RWeka_0.2-11 rJava_0.4-11 classpath= .;C:\Archivos de programa\Java\jdk1.5.0\lib;C:\Archivos de programa\R\R- 2.4.0\library\RWeka\jar An error occurs when .jnew command is executed, on class "weka/core/Instances" :

Hi, I'm trying to use RWeka and followed the following example from the RWeka manual. ============ ## Use some example data. w <- read.arff(system.file("arff","weather.nominal.arff", package = "RWeka")) ## Identify a decision tree. m <- J48(play~., data = w) m ## Use 10 fold cross-validation. e <- evaluate_Weka_classifier(m, cost = matrix(c(0,2,1,0),

Dear all, I am using the RWeka package to append several arff files. Although it works the resulting arff files always have "@relation R_data_frame", and I have to change this manually to my desired relation name. Can the package accomplish this for me instead? Thank you, Wil Koetsier

I need to create an arff file.i have the necesaary codes as two parts and i need to combine them..if there is anyone who can help i'll send the codes..thank you. -- View this message in context: http://r.789695.n4.nabble.com/help-for-creating-arff-file-i-have-the-codes-tp2308039p2308039.html Sent from the R help mailing list archive at Nabble.com.

Hi Dirk I think there are problems with pg_config, the configure script of RPostgreSQL checks for pg_config and got ¡°checking for pg_config... /usr/bin/pg_config¡±. In Solaris 10u7 X64, three versions of PostgreSQL are installed, there are in /usr/postgres/8.2(8.2.9) and /usr/postgres/8.3(8.3.3), the corresponding bin files are in /usr/postgres/<version>/bin and

Hi, I am using RpgSQL to retrieve data from a PostgreSQL database wich is with encoding UTF8, and I have some Chinese character in one of the columns, unfortunately R can't show it correctly. > df <- dbGetQuery(con, "select * from test") > df a b 1 1 ????????\xa2 2 2 ???? EURO\xa1 I see the following option, do I need to change the encoding option to show

Hi everyone, I am new to field of data mining as well as particularly using R respectively RWeka for writing my master thesis. I intend to create some specific J48 classification trees with the RWeka_classifiers_tree function. When I run the source code it says ?cannot handle numeric class?. I therefore checked the arff-file and indeed there it says that the class variable is numeric although it

Hi, Since we can?t access Google Groups here in China, so please forgive me if anyone has asked this question before. Sincerely Xiaobo Gu

Hi, I am trying to write a function do cast columns of data frame as factor in a loop, the source is : as.factor.loop <- function(df, cols){ if (!is.null(df) && !is.null(cols) && length(cols) > 0) { for(col in cols) { df[[col]] <- as.factor(df[[col]]) } } } source('D:/ambertuil.r') x <- 1:5 y <- 2:6 df <- data.frame(x=x, y=y)

Hi, I am using Rattle 2.6.4 with R 2.12.2 on win64, is this a bug ? Following is the content after execute the associate analysis process: Summary of the Apriori Association Rules: Number of Rules: 23351 Summary of the Measures of Interestingness: support confidence lift Min. :0.1250 Min. :1 Min. :2.667 1st Qu.:0.1250 1st Qu.:1 1st Qu.:2.667 Median :0.1250

A question, please about development of R packages: Are there any guidelines or best practices for deciding when and why to implement an operation in R, vs. implementing it in C? The "Writing R Extensions" recommends "working in interpreted R code . . . this is normally the best option." But we do write C-functions and access them in R - the question is, when/why is this

Hi, I see the following is the credit scoreing in R guide : m2<-glm(formula = good_bad ~ checking + duration + history+ purpose +amount + savings + employed + installp + marital + coapp +age + other + depends + telephon + foreign +checking:amount What does checking:amount mean? Regards, Xiaobo Gu

Especially for large ff objects. Xiaobo.Gu [[alternative HTML version deleted]]