Displaying 19 results from an estimated 19 matches similar to: "Error in matrix, not ordered vectors or numerical value, and SIAR."
2011 Nov 10
4
Error in Summary.factor(c(1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 4L, : max not meaningful for factors
Hello,
Beginner, sorry if this is wasting anyone's time, but have been working on
this for a couple of days now, think it should have take a few hours!
The Problem:
Error in Summary.factor(c(1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 4L, :
max not meaningful for factors
I have tried to re-arrange and check formula. I am working in SIAR, and
cannot get model1 to run because of the error
2010 Sep 07
1
problems with siar package
Hi, my name is Julio, I'm trying to run a script, specifically with the siar
package on R (I have attached the script) but the program collapses on
during the run. The error message says:
*** caught segfault ***
address 0xb31941cc, cause 'memory not mapped'
Traceback:
1: .C("siarmcmcv4", as.integer(numdata), as.integer(numsources),
as.integer(numiso),
2011 Nov 10
1
Errors in SIAR
Help!
model1 <- siarmcmcdirichletv4(data, source, tef, concdep=0, 500000, 50000)
Error in matrix(1, ncol = (numsources + numiso) * numgroups, nrow =
(siardata$iterations - :
invalid 'ncol' value (too large or NA)
In addition: Warning message:
In Ops.ordered((numsources + numiso), numgroups) :
'*' is not meaningful for ordered factors
Previous message, but more
2012 Jul 04
2
problem loading siar
Hi,
I have a problem while loading the "siar" program in R.
When I am loading siar, system does not load convexhull. On the screen I
have seen such writings.
The following object(s) are masked from ‘package:spatstat’:
convexhull
How can I load the convexhull, how can I unmask from this package? I will
be appreciated if you give advice about this.
Best
Sukran
2012 Apr 15
3
Problems loading siar package
Hello,
I recently bought a new Macbook Pro and installed R via a disk image from an
older computer - it seems to work fine. I then installed the package "siar",
tried to load it via the library command and received the following messages
(note the "mvtnorm" package did not appear to load correctly):
trying URL
2012 Oct 15
3
Problema con función readSIAR del paquete solaR
Saludos:
Hace unos días me encontré con un problema en la función readSIAR del
paquete solaR; pensé en actualizar pero no lo hice en el momento.
El caso es que acabo de actualizar el paquete solaR -y el resto de
paquetes también- y veo que el error no se va.
------ Corte desde la consola --------
R version 2.15.1 (2012-06-22) -- "Roasted Marshmallows"
Copyright (C) 2012 The R
2003 May 30
2
Need help installing qtoolbox
I have windows version of R v1.6.2
I have downloaded the qtoolbox.zip from
http://www.cmis.csiro.au/S-PLUS/qtoolbox/
My R command line is
> install.packages("C:/Program Files/R/qtoolbox.zip", .libPaths()[1], CRAN =
NULL)
and I get the following error message:
updating HTML package descriptions
Warning message:
error -1 in extracting from zip file
>
Is there another way to
2007 Feb 01
3
Can this loop be delooped?
Hi.
I have the following code in a loop. It splits a vector into subvectors of
equal size. But if the size of the original vector is not an exact multiple
of the desired subvector size, then the first few subvectors have one more
element than the last few. I know that the cut function could be used to
determine where to break up the vector, but it doesn't seem to provide
control over
2011 Nov 13
0
Has anyone used SIAR package add on?
On Nov 12, 2011 at 8:29pm Alex wrote:
> Has anyone used SIAR package add on?
I posted a reply to an earlier question from you on this subject. See
http://r.789695.n4.nabble.com/Errors-in-SIAR-td4029804.html. In it I note
that there are problems with the function from siar (not SIAR) you are
using, but that this may not be "your" problem, that the function calls for
matrices (you
2012 Nov 14
0
SIAR: problem> session aborted
I'm absolutely not brilliant with R yet and working with package SIAR.
1) SIAR reads the first column of a table.txt as "int" instead of "num". Who
can help?
2) I therefore made tables with a data.frame() > that seems to work. But at
the end of the loading proces of the SIARmodel, I get a warning screen with
"Session Aborted". Everything crashes and I can start
2013 Oct 31
0
SIAR problem with model running
Hi there,
I am trying to run an MCMC on stable isotope data from certain organisms to
determine their dietary habits in the package SIAR.
I have prepared my data according to Inger, R., Jackson, A., Parnell, A.,
Bearhop, S. : SIAR V4 (Stable Isotope Analysis in R) an Ecologist's Guide
(also better known as 'SIAR for dummies'), which is as follows:
- consumer data table (columns
2012 Oct 18
0
siar error
Hello,
I am trying to run the demoscript for the package "siar". However, using
the example script and example data supplied I cannot get 1) the model to
run unless I specify iterations =500 and burnin = 500 and 2) if the model
does work without crashing R then the function "siarhistograms" does not
work . Can anyone point out where I am going wrong?
>model1 <-
2010 Mar 26
3
Create blocks or observations
Anyone who can help me with this?
I have 48 observations (I dont want to alter their order). I want to group
these observations into 16 blocks. So I should have 3 observations for each
block. This is what I did in R, but it has warnings.
> y #contains my 48 observations
[1] 2.4 2.4 2.4 2.2 2.1 1.5 2.3 2.3 2.5 2.0 1.9 1.7 2.2 1.8 3.2 3.2 2.7 2.2
2.2
[20] 1.9 1.9 1.8 2.7 3.0
2011 May 17
1
simprof test using jaccard distance
Dear All,
I would like to use the simprof function (clustsig package) but the available distances do not include Jaccard distance, which is the most appropriate for pres/abs community data. Here is the core of the function:
> simprof
function (data, num.expected = 1000, num.simulated = 999, method.cluster = "average",
method.distance = "euclidean", method.transform =
1998 Mar 12
0
Code to check Password Server Group Memberships
I am not a member of the samba listserv, but I wanted to contribute
the following code to the samba effort.
The following is clipped from some experimental
changes I have made to my own copy of the samba
source. I have not included all of the changes
because I don't have the time to. But someone should
be able to properly do the integration without too
much effort.
Summary, these
2013 Feb 01
2
Change default order of colors & line types
Dear R users,
I'd like to change the default order of colors & line types.
Especially I am using ggplot2 and using color Set1.
In Set1, the default color order is red, blue, green, violet,.. ect.
However, I want to put red in fourth (not first).
Likewise, I want to change the order of default linetype. I want to
put "solid" line in fourth.
How can I do thses?
R code to draw the
2012 Aug 19
2
Prueba de Thom y series temporales homogéneas de prueba
Hola a todos:
Hace unos meses estuve preguntando sobre la prueba de Thom para
comprobar la homogeneidad de series temporales sobre datos de radiación
e insolación (después he visto que también se usa con otras variables
meteorológicas) [0].
El caso es que por distintas razones no había podido avanzar en el
asunto y ahora vuelvo sobre él.
Creé una función para realizar la prueba de Thom pero
2012 Jul 03
1
problem in lodging package
Dear,
I would like to use the siar program, when I lodging package the message
appear, so I couldn't use the related calculations.
The following object(s) are masked from ‘package:spatstat’:convexhull
Could you please write me what shoud I do?
Sukran Yalcin Ozdilek
[[alternative HTML version deleted]]
2010 Jul 18
6
CRAN (and crantastic) updates this week
CRAN (and crantastic) updates this week
New packages
------------
* allan (1.0)
Alan Lee
http://crantastic.org/packages/allan
Automates Large Linear Analysis Model Fitting
* andrews (1.0)
Jaroslav Myslivec
http://crantastic.org/packages/andrews
Andrews curves for visualization of multidimensional data
* anesrake (0.3)
Josh Pasek
http://crantastic.org/packages/anesrake
This