search for: yvo

Does anybody know how to do a intermediate linkage clustering in R? Is there a command allready developed? Which package do I have to load? Thanks in advance yvo -- View this message in context: http://www.nabble.com/intermediate-linkage-clustering-tp15736379p15736379.html Sent from the R help mailing list archive at Nabble.com.

...ression lines plot(bif,abund,type="n", xlab= "number_bifurcations", ylab="abundances") sbif<-split(bif,stage) sabund<-split(abund,stage) points(sabund[[2]],sbif[[2]],pch=16, col="red") for(i in 1:2) abline(lm(sabund[[i]]~sbif[[i]])) Thanks in advance Yvonne Fabian -- View this message in context: http://www.nabble.com/Plot-with-two-different-coloured-regression-lines-and-legend-tp15828255p15828255.html Sent from the R help mailing list archive at Nabble.com.

I''ve been tasked at my workplace to upgrade our puppet installation to a more modern version. Currently all the environments run a RubyGem version of puppet 0.25.4 on mostly RHEL/Centos 5.3 - 5.5 (there are, like most environments, a few laggards running RHEL4 or new machines running CentOS 6). The plan is to upgrade these to the most stable version of Puppet, which at the time of

...quot;) res2a <- lme(response~x+y+z+treatment,correlation = corCAR1(form = ~ session|trapfield), random=~1|field, na.action=na.omit, data=plates, method="ML") Error: Incompatible formulas for groups in "random" and "correlation" What is the problem? thanks a lot! Yvonne -- View this message in context: http://r.789695.n4.nabble.com/lme-correlationstructure-AR1-and-random-factor-tp3416248p3416248.html Sent from the R help mailing list archive at Nabble.com.

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...t;) plot(hc) plot(hc, hang = -1) Here I want to compare the number of bifurcations for each species, but therefor I need this numbers first. There should be an elegant way to get this- instead of counting everything. I would be happy if you could tell me the solution!!!! Thanks a lot in advance!!! Yvonne Fabian -- View this message in context: http://www.nabble.com/bifurcation-countings-in-a-cluster-dendrogram-tp15773122p15773122.html Sent from the R help mailing list archive at Nabble.com.

...jaccard", binary=T, diag=FALSE, upper=FALSE, na.rm = FALSE) hc2<- hclust(Sc2Mpred_JD, "ave") plot(hc2, hang = -1) str(hc2) merge height order labels Do you know of any function that computes that? I did not find any. I hope you have a good advice! Thanks a lot in advance!! Yvonne Yvonne Fabian PhD Student University of Fribourg Department of Biology Ecology and Evolution Group http://www.nabble.com/file/p16142989/Sc2Mown_Pred.txt Sc2Mown_Pred.txt -- View this message in context: http://www.nabble.com/Table-for-clustering-dendrogram-tp16142989p161...

...ebody already created a solution? Something like that, which is not working?. rgee1 <- geeglm(Alus01 ~ treatment + scale(LAI) + scale(log(Tot_Sp)) + scale(AveH) , data = plates, family = binomial, waves = session, id = trapfield, corstr = "ar1") Any help is appreciated a lot?. Thanks Yvonne -- View this message in context: http://r.789695.n4.nabble.com/binary-data-with-correlation-tp3393884p3393884.html Sent from the R help mailing list archive at Nabble.com.