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--=====================_24736660==_ Content-Type: text/plain; charset="iso-8859-1"; format=flowed Content-Transfer-Encoding: quoted-printable SVD-Error on R 1.1.0 Windows 98 I get the following error applying svd on a positive definite matrix : > sk2 [,1] [,2] [,3] [,4] [,5] [1,] 1.0460139783 0.084356992 -2.810553e-04 -1.303237e-03 2.011809e-03 [2,] 0.0843569924 1.154650879 -5.152560e-04 -2.389213e-03 3.688230e-03 [3,] -0.0002810553 -0.000515256 1.000002e+00 7.960227e-06 -1.228821e-05 [4...

...2):1):82);" t<-read.tree(text=un) # following example from ape package cl1 <- collapsed.intervals(ci,0) cl2 <- collapsed.intervals(ci,0.0119) sk1 <- skyline(cl1) # from collapsed intervals sk1 <- skyline(ci) # from coalescent intervals sk1 <- skyline(tree.hiv) # from tree sk2 <- skyline(cl2) # from collapsed intervals sk2 <- skyline(ci, 0.0119) # from coalescent intervals sk2 <- skyline(tree, 0.0119) # from tree plot(sk1, show.years=TRUE, subst.rate=0.0023, present.year = 2011, col=c(grey(.8),1)) lines(sk2, show.years=TRUE, subst.rate=0.0023, present.year = 2...

...) c[ind] = sqrt(sw2)*x+means[u] c1[ind] <- sqrt(sw2)*(x*r+y*sqrt(1-r**2))+means[u] g[ind] = u mu1[ind] =means[u] }} data.frame(g=factor(g),c,e=(c1 > mean(c1)+z*sd(c1))+0) } ################################################################# sk1=sk2=sk11=sk21=skR=k1=m1=R2=R1=n10=f10=nb10=b10=s10=p10=bca10=NULL n.cp=f.cp=nb.cp=b.cp=s.cp=p.cp=bca.cp=NULL for (k in c(12,24,48)) { for (m in c(25,50,100)) { for (j in 1:1000) { #### PREPARING CLUSTER LEVEL DATA ###### d1=SimClust(k,m,mu=30,sb2=25,sw2=75,r=0.5,z=0.841621) # for p=0.2...

Commit-ID: f97573c5c1a47595c5a059b84b74f54cb2cd8d6d Gitweb: http://git.kernel.org/?p=libs/klibc/klibc.git;a=commit;h=f97573c5c1a47595c5a059b84b74f54cb2cd8d6d Author: Stephen Kitt <steve at sk2.org> AuthorDate: Mon, 6 Jun 2016 22:45:27 +0800 Committer: Ben Hutchings <ben at decadent.org.uk> CommitDate: Fri, 25 Jan 2019 02:57:21 +0000 [klibc] jobs: Handle string-based job descriptors When looking for a job using a string descriptor, e.g. fg %man the relevant loop in src/jobs...

Commit-ID: 8115b5d06f75ea543d01355384cf5556aa388481 Gitweb: http://git.kernel.org/?p=libs/klibc/klibc.git;a=commit;h=8115b5d06f75ea543d01355384cf5556aa388481 Author: Stephen Kitt <steve at sk2.org> AuthorDate: Mon, 6 Jun 2016 22:45:27 +0800 Committer: Ben Hutchings <ben at decadent.org.uk> CommitDate: Sat, 28 Mar 2020 21:42:54 +0000 [klibc] dash: jobs: Handle string-based job descriptors [ dash commit 203e8395faa9135956e3b2a2b749b6dd96a7e988 ] When looking for a job using a...

Dear All, Is there any existing code for plotting silhouette for kmeans clustering results? Many thanks! Linda [[alternative HTML version deleted]]

...(((((((41.1:0, 1.1:3):0, (9.1:0, 27.1:0):1):2, (5.1:0, 10.1:0):3):1, (38.1:1, (4.1:1, (24.1:0, 18.1:0):2):0):0):16, 36.1:19):8, (32.1:0, 33.1:1):29):33, (40.1:18, ((23.1:0, 12.1:1):3, 34.1:2):16):42):1):82);" tr <- read.tree(text = paste(tr, collapse = "")) sk1 <- skyline(tr) sk2 <- skyline(tr, 0.0119) plot(sk1, show.years=TRUE, subst.rate=0.0023, present.year = 2011, col=c(grey(.8),1)) lines(sk2, show.years=TRUE, subst.rate=0.0023, present.year = 2011) legend(.15,500, c("classic", "generalized"), col=c(grey(.8),1),lty=1) Thank you in advance! Chee...

...s awl/0.55. > notfound 702656 0.10.0-1 Bug #702656 {Done: Dmitry Smirnov <onlyjob at debian.org>} [libgoffice-0.10-10] libgoffice-0.10-10: Add goffice-0.8 source package No longer marked as found in versions goffice/0.10.0-1. > fixed 702402 3 Bug #702402 {Done: Stephen Kitt <steve at sk2.org>} [src:binutils-mingw-w64] binutils: CVE-2012-3509 Marked as fixed in versions binutils-mingw-w64/3. > fixed 701841 0.32-53-gdc59a10-1 Bug #701841 {Done: Alessio Treglia <alessio at debian.org>} [mp3fs] mp3fs: version 0.32 was released last year Marked as fixed in versions mp3fs/0.3...

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