Displaying 1 result from an estimated 1 matches for "significantclust".
2011 May 17
1
simprof test using jaccard distance
...s(rawdata))) {
for (i in 1:length(simprof.results$samples)) {
for (j in 1:length(simprof.results$samples[[i]])) {
simprof.results$samples[[i]][j] <- rownames(rawdata)[as.numeric(simprof.results$samples[[i]][j])]
}
}
}
results[["significantclusters"]] <- simprof.results$samples
return(results)
}
<environment: namespace:clustsig>
I tried to trick the function by bypassing the input of a raw community matrix (sites x species) by inputing instead a distance matrix already calculated with vegdist (vegan package) (Jaccard dis...