search for: librblas

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2018 Sep 22
4
libRblas.so: cannot open shared object file: No such file or directory
R 3.5.1 is installed under Linux Mint 19 from binaries r-base and r-base-dev from ubuntu bionic-cran35.? Mysteriously, packages using libRblas cannot be compiled.? I get: libRblas.so: cannot open shared object file: No such file or directory.? And indeed, I find no libRblas.so. Any ideas about how to fix this? Thanks, Steve
2007 Jul 26
1
Problem installing tseries package
...-std=gnu99 -c tsutils.c -o tsutils.o gcc -shared -Bdirect,--hash-stype=both,-Wl,-O1 -o tseries.so arma.o bdstest.o boot.o dsumsl.o garch.o ppsum.o tsutils.o -L/usr/lib/R/lib -lRblas -lgfortran -lm -lgcc_s -lgfortran -lm -lgcc_s -L/usr/lib/R/lib -lR /usr/bin/ld: skipping incompatible /usr/lib/R/lib/libRblas.so when searching for -lRblas /usr/bin/ld: skipping incompatible /usr/lib/R/lib/libRblas.so when searching for -lRblas /usr/bin/ld: cannot find -lRblas collect2: ld returned 1 exit status make: *** [tseries.so] Error 1 ERROR: compilation failed for package 'tseries' ** Removing '/usr/li...
2010 Mar 03
1
why no libRblas.so in ubuntu packages on CRAN?
Hi, everybody. I notice debian packages for Ubuntu on CRAN are missing "libRblas.so" and I'm trying to find out why. Why do I care? We are working in an hpc project in a CentOS Linux cluster. That led me to the question of "which BLAS is fastest?" Dirk E referred me this morning to the R admin manual. The standard R compilation creates a shared blas libra...
2018 Sep 23
2
libRblas.so: cannot open shared object file: No such file or directory
For example, install.packages("emplik") is failing with: libRblas.so: cannot open shared object file: No such file or directory As Dirk pointed out, this is likely an error in the emplik package, Steve On 09/23/2018 09:57 AM, Ista Zahn wrote: > On Sat, Sep 22, 2018 at 4:08 PM Steve Gutreuter <sgutreuter at gmail.com> wrote: >> R 3.5.1 is ins...
2018 Sep 23
1
libRblas.so: cannot open shared object file: No such file or directory
...?[5] LC_MONETARY=en_US.UTF-8??? LC_MESSAGES=en_US.UTF-8 ?[7] LC_PAPER=en_US.UTF-8?????? LC_NAME=C ?[9] LC_ADDRESS=C?????????????? LC_TELEPHONE=C [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C so R is indeed aware of a blas.? However, packages that require a blas fail to build and return libRblas.so: cannot open shared object file: No such file or directory Baffled, Steve On 09/22/2018 04:55 PM, Dirk Eddelbuettel wrote: > On 22 September 2018 at 16:08, Steve Gutreuter wrote: > | R 3.5.1 is installed under Linux Mint 19 from binaries r-base and > | r-base-dev from ubuntu bionic...
2010 Dec 16
1
'libRblas.so' missing in R 2.12.1
Dear R developers, I just compiled the latest version of R (2.12.1) and noticed that 'libRblas.so' is missing in the '/x86_64/src/extra/blas' subdirectory of my R-installation. Did I miss ongoing discussions on the Mailinglist about this or might it be a local problem? Thanks for this brilliant software. Best Christian -- Christian Kohler Institute of Functional Genomics ~...
2009 Sep 14
1
R: error while loading shared libraries: libRblas.so:
Hi,       I am trying to debug R on fedora9.0. When I use gdb to debug R-1.9.2, I am getting the error "R: error while loading shared libraries: libRblas.so: cannot open shared object file: No such file or directory" "Program exited with code 0177. Missing separate debuginfos, use: debuginfo-install glibc.i686" I have libRblas.so shared library in two paths, 1) ../../src/extra/blas/libRblas.so 2) ../../lib/libRblas.so I set the LD_L...
2007 Aug 18
0
Installing Rstem on Mac Intel
...stem package available for Intel Macs? Thanks in advance! Tina. ... mytestpointer targets in passing argument 1 of 'Rf_mkChar' differ in signedness ld: warning can't open dynamic library: /Developer/SDKs/ MacOSX10.4u.sdk/Library/Frameworks/R.framework/Versions/2.5/Resources/ lib/libRblas.dylib referenced from: /Library/Frameworks/ R.framework/../R.framework/R (checking for undefined symbols may be affected) (No such file or directory, errno = 2) ld: warning can't open dynamic library: /Developer/SDKs/ MacOSX10.4u.sdk/Library/Frameworks/R.framework/Versions/2.5/Resources/ l...
2018 Sep 22
0
libRblas.so: cannot open shared object file: No such file or directory
On 22 September 2018 at 16:08, Steve Gutreuter wrote: | R 3.5.1 is installed under Linux Mint 19 from binaries r-base and | r-base-dev from ubuntu bionic-cran35.? Mysteriously, packages using | libRblas cannot be compiled.? I get: libRblas.so: cannot open shared | object file: No such file or directory.? And indeed, I find no libRblas.so. | | Any ideas about how to fix this? What does sessionInfo() show? For me on this computer it is R> sessionInfo() R version 3.5.1 (2018-07-02)...
2008 Jan 27
2
problems building and installing some packages in 'unstable'
...eMove, available from CRAN) depending on KernSmooth fails with: ---<---------------cut here---------------start-------------->--- Loading required package: KernSmooth Error in dyn.load(file, ...) : unable to load shared library '/usr/lib/R/library/KernSmooth/libs/KernSmooth.so': libRblas.so: cannot open shared object file: No such file or directory ---<---------------cut here---------------end---------------->--- Needless to say, the package built fine until about 2 weeks ago and no changes to the source have been made. 2) Installing a package (install.packages("tripEs...
2008 Oct 02
1
KernSmooth not loading in R 2.7.2
I just upgraded to R 2.7.2 (from 2.7.1) this morning (Ubuntu amd64 platform). Shortly afterwards, I ran into a problem loading the odesolve library, it could not find libRblas.so. I was able to fix this by rebuilding odesolve. Now, KernSmooth gives me the same problem... R> library(KernSmooth) Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared library '/usr/lib/R/library/KernSmooth/libs/KernSmooth.so': libRblas.so: cannot open shared...
2011 Jan 22
0
libRblas.so: undefined reference to `xerbla_' ?
...i=0; i<2; i++){ printf("%f\n", B[i]); } return info; } ========================== When I am trying to link to BLAS/LAPACK using gcc -std=gnu99 solve.c -o test -I$R_HOME/include -L$R_HOME/lib -lRblas -lRlapack -lgfortran linker generates an error message $RHOME/lib/libRblas.so: undefined reference to `xerbla_' Dumping symbol table shows that indeed libRblas.so has undefined xerbla_ symbol and so does libRlapack. Confusingly, documentation says that xerbla is error checking routine for BLAS, but it is not found in the library libRblas. I did find out that...
2014 May 22
1
R 3.1 breaks RStudio in Fedora 20?
Hi All I just installed R 3.1 on fedora 20 after removing rstudio # rpm -q R R-3.1.0-5.fc20.x86_64 after I removed rstudio (I don't use it that much but need it for teaching) I tried to reinstall rstudio but its missing libRblas.so and libRlapack.so dependencies I'm guessed it would be OK to force it because lapack-devel and blas-devel are installed so I tried # rpm -ivh --no-deps rstudio-0.98.507-x86_64.rpm but I'm not sure this is OK because rstudio seems to be dead although I suspect thats a different problem...
2010 Aug 16
1
R-2.11.1 Download: missing libRblas.so library
Hello, I've been trying to use R-2.11.1 but I get the following error when trying to run R on linux: "error while loading shared libraries: libRblas.so: cannot open shared object file: No such file or directory" How can I solve this problem? Best, Katy
2010 Nov 20
1
R-.12.0 atlas lapack
...hs ago. The computer was equipped with these:- ---cpu amd64 2 cores ---o/s cblfs 64-bit only linux kernel-2.6.32 gcc-4.4.2 jdk(1.5)-6U20? ---bls atlas3.9.26 lapacck-3.2.1 I obtained an installed directory of ~58Mbytes and in the ~/lib directory was libR.so (~7.8Mbytes in size) as well as libRblas.so and libRlapack.so (~2.9Mbytes). I have since upgraded atlas to atlas3.9.32 and lapack to lapack-3.2.2. to fulfill requirements of other numeric intensive programs I use. Today I compiled and installed R-2.12.0 using the same settings used for R-2.11.1 and these are my findings:- {...
2010 Jun 07
1
Compiling R-2.11.1 patched on Ubuntu 10.04 with Optimized GotoBLAS2 libraries
...a6-jdk sun-java6-jre Subsequently, I successfully installed R 2.11.1 patched from subversion using defaults: ./configure Next, I built the optimized Optimized GotoBLAS2 libraries version 1.13 and placed the file 'libgoto2_penrynp-r1.13.so' in /usr/lib Finally, I renamed the original 'libRblas.so' file that was installed in /usr/local/lib64 and created a soft link to the libgoto2 file. cd /usr/local/lib64/R/lib sudo ln -s /usr/lib/libgoto2_penrynp-r1.13.so libRblas.so
2019 May 08
4
openblas
...installed openblas 0.3.7 but I am not 100% sure that it is being used by R. Using ./configure --with-blas="-lopenblas" Then running R to discover the PID I get: Rd % lsof -p 17960|egrep -i blas R 17960 rhankin txt REG 1,8 189224 33471762 /Users/rhankin/Rd/lib/R/lib/libRblas.dylib But it is not clear to me how to interpret this. Am I using openblas as intended? I suspect not, for I cannot reproduce the error. Can anyone advise? hankin.robin at gmail.com
2018 Sep 23
0
libRblas.so: cannot open shared object file: No such file or directory
On 23 September 2018 at 10:09, Steve Gutreuter wrote: | For example, | | install.packages("emplik") | | is failing with: libRblas.so: cannot open shared object file: No such | file or directory | | As Dirk pointed out, this is likely an error in the emplik package, I made one educated guess. Now we have more information and can update: - this is a CRAN package so everybody can check its status: https://cloud.r-project...
2019 May 08
3
openblas
...gt; (CCing the R-devel list, maybe someone will have a better answer.) > > To be honest, I don't know how to. I wasn't able to configure R to use > OpenBLAS using the configure script and options on my Linux Fedora system. > I configure it without external BLAS, then replace the libRblas.dylib (.so > in my case) with a link to the OpenBLAS dynamic link library. R on Fedora uses openblas by default since Fedora 23. In fact, there's a specific package, openblas-Rblas, that provides libRblas.so. $ ll /usr/lib64/R/lib/ total 64544 -rwxr-xr-x. 1 root root 60113776 feb 28 13:37...
2007 Jan 18
2
building R on freebsd 6.2 (amd64)
Hi, I updated my os to freebsd 6.2 and built R-patched with no changes in configure. I pass make check and copy the R executable to /usr/local/bin/R. Then when I start R, I get /libexec/ld-elf.so.1: Shared object "libRblas.so" not found, required by "R" and have to copy/link the two shared object files (libRblas.so and libRlapack.so) to somewhere "visible" like /usr/local/lib/ as well. I didn't have to do this last step in freebsd 6.1. Is there some configure setting I can use to avoid h...