search for: kyli

Displaying 20 results from an estimated 34 matches for "kyli".

Did you mean: kyle
2004 Oct 22
1
p-values for the dip test
...ercentage points for various sample sizes. The same table is provided in the diptest package as 'qDiptab' (but at greater accuracy). n=63 is not tabled but n=50 and 100 are. In the table for n=100 the value given for 90% is 0.0471 so where does the 0.474 come from? Any help appreciated! Kylie. [1] Hartigan JA & Hartigan PM. "The Dip Test of Unimodality", The Annals of Statistics, v13(1):70-84, 1985.
2006 May 15
2
[PATCH 10/12 bugfix: openssh-4.3p2: memory leak
...his branch. This patch adds the xfree. This entire set of patches passed the regression tests on my system. Bug found by Coverity. Signed-off-by: Kylene Hall <kjhall at us.ibm.com> --- sshconnect.c | 1 + 1 files changed, 1 insertion(+) diff -uprN openssh-4.3p2/sshconnect.c openssh-4.3p2-kylie/sshconnect.c --- openssh-4.3p2/sshconnect.c 2005-12-13 02:29:03.000000000 -0600 +++ openssh-4.3p2-kylie/sshconnect.c 2006-05-04 10:07:57.000000000 -0500 @@ -937,6 +937,7 @@ ssh_login(Sensitive *sensitive, const ch } else { ssh_kex(host, hostaddr); ssh_userauth1(local_user, server_user, hos...
2019 Jul 23
3
Any plans for ALTREP lists (VECSXP)?
Hi Kylie, Is it a list with only numerics in it? (I only see REALSXPs there, but obviously inspect isn't showing all of them). If so, you could load it up into one big vector and then also keep partitioning information around. Bioconductor does this (see ?IRanges::CompressedList ). The potential benef...
2019 Jul 23
3
Any plans for ALTREP lists (VECSXP)?
...d be much faster and simpler for me to return a theoretical ALTREP list that serves SEXP elements on-demand, similar to how ALTSTRING seems to be implemented. I don?t know how many other people would get a use out of ALTREP lists, but I certainly would. Are there any plans for this? Thanks! ~~~ Kylie Ariel Bemis Khoury College of Computer Sciences Northeastern University kuwisdelu.github.io<https://kuwisdelu.github.io> [[alternative HTML version deleted]]
2019 Jul 24
1
[External] Re: Any plans for ALTREP lists (VECSXP)?
...ltvec' methods a class should provide: > > Extract_subset > not Dataptr > not Dataptr_or_null > > 'altlist' specific methods: > > Elt > Set_elt > > Best, > > luke > > On Tue, 23 Jul 2019, Gabriel Becker wrote: > > > Hi Kylie, > > > > Is it a list with only numerics in it? (I only see REALSXPs there, but > > obviously inspect isn't showing all of them). If so, you could load it up > > into one big vector and then also keep partitioning information around. > > Bioconductor does this (se...
2006 May 15
1
[PATCH 2/12] bug fix: openssh-4.3p2 NULL dereference
...r check. This entire set of patches passed the regression tests on my system. Null dereference bug found by Coverity. Signed-off-by: Kylene Hall <kjhall at us.ibm.com> --- deattack.c | 2 +- 1 files changed, 1 insertion(+), 1 deletion(-) diff -uprN openssh-4.3p2/deattack.c openssh-4.3p2-kylie/deattack.c --- openssh-4.3p2/deattack.c 2003-09-22 06:04:23.000000000 -0500 +++ openssh-4.3p2-kylie/deattack.c 2006-05-04 15:10:19.000000000 -0500 @@ -137,7 +137,7 @@ detect_attack(u_char *buf, u_int32_t len for (i = HASH(c) & (n - 1); h[i] != HASH_UNUSED; i = (i + 1) & (n - 1))...
2019 Jul 19
2
ALTREP wrappers and factors
Hi Jiefei and Kylie, Great to see people engaging with the ALTREP framework and identifying places we may need more tooling. Comments inline. On Thu, Jul 18, 2019 at 12:22 PM King Jiefei <szwjf08 at gmail.com> wrote: > > If that is the case and you are 100% sure the reference number should be 1 > fo...
2005 Jul 14
2
Coxph with factors
...ing survfit with presepecified values for the covariates and factor (i.e. '0' to get the baseline) I get an error message, which I think is a result of my inability to specify the factors in the correct manner. I would very much appreciate if somebody can help me out. Thanks very much, Kylie
2019 Jul 24
0
[External] Re: Any plans for ALTREP lists (VECSXP)?
...lized_state Duplicate or DuplicateEx Coerce Inspect Length 'altvec' methods a class should provide: Extract_subset not Dataptr not Dataptr_or_null 'altlist' specific methods: Elt Set_elt Best, luke On Tue, 23 Jul 2019, Gabriel Becker wrote: > Hi Kylie, > > Is it a list with only numerics in it? (I only see REALSXPs there, but > obviously inspect isn't showing all of them). If so, you could load it up > into one big vector and then also keep partitioning information around. > Bioconductor does this (see ?IRanges::CompressedLis...
2006 Feb 28
1
Capturing warning messages within R
...ge"s from R? I'm using Rpy (the python plug-in for R). I guess those are not python exception so I couldn't use the "try" block. For example: Ran out of iterations and did not converge in: fitter(X, Y, strats, offset, init, control, weights = weights, MPR Regards, Kylie-Anne Richards [[alternative HTML version deleted]]
2019 Jul 17
2
ALTREP wrappers and factors
...c2 [MARK,NAM(7)] (len=2, tl=0) @7fb0c81bf4c0 09 CHARSXP g1c1 [MARK,gp=0x61] [ASCII] [cached] "a" @7fb0c90ba728 09 CHARSXP g1c1 [MARK,gp=0x61] [ASCII] [cached] "b" Is there a way to do this that doesn?t rely on .Internal() and won?t produce R CMD check warnings? ~~~ Kylie Ariel Bemis Khoury College of Computer Sciences Northeastern University kuwisdelu.github.io<https://kuwisdelu.github.io> [[alternative HTML version deleted]]
2019 Jul 23
0
Any plans for ALTREP lists (VECSXP)?
Hi Kylie, As an alternative in the short term, you could consider deriving from S4Vector's List class, implementing the getListElement() method to lazily create the objects. Michael On Tue, Jul 23, 2019 at 9:09 AM Bemis, Kylie <k.bemis at northeastern.edu> wrote: > > Hello, > > I w...
2019 Jul 18
0
ALTREP wrappers and factors
Hi Kylie, For your question, I don't think a wrapper can completely solve your problem. The duplication occurs since your variable y has more than 1 reference number( Please see highlighted), so even you have a wrapper, any changes on the value of the wrapper still can trigger the duplication. > ....
2006 May 15
0
[PATCH 1/12] bug fix: openssh-4.3p2 memory leak
...confines of all paths. This entire set of patches passed the regression tests on my system. Memory leak bug found by Coverity. Signed-off-by: Kylene Hall <kjhall at us.ibm.com> --- clientloop.c | 2 ++ 1 files changed, 2 insertions(+) diff -uprN openssh-4.3p2/clientloop.c openssh-4.3p2-kylie/clientloop.c --- openssh-4.3p2/clientloop.c 2005-12-30 23:22:32.000000000 -0600 +++ openssh-4.3p2-kylie/clientloop.c 2006-05-04 10:36:49.000000000 -0500 @@ -833,6 +833,8 @@ client_process_control(fd_set * readset) debug2("%s: accepted tty %d, subsys %d, cmd %s", __func__, cctx-&g...
2006 May 15
0
[PATCH 3/12] bug fix: openssh-4.3p2 resource leak
...function. This entire set of patches passed the regression tests on my system. Resource leak bug found by Coverity. Signed-off-by: Kylene Hall <kjhall at us.ibm.com> --- hostfile.c | 4 +++- 1 files changed, 3 insertions(+), 1 deletion(-) diff -uprN openssh-4.3p2/hostfile.c openssh-4.3p2-kylie/hostfile.c --- openssh-4.3p2/hostfile.c 2005-11-22 02:43:27.000000000 -0600 +++ openssh-4.3p2-kylie/hostfile.c 2006-05-04 13:51:10.000000000 -0500 @@ -254,8 +254,10 @@ check_host_in_hostfile_by_key_or_type(co if (key == NULL) { /* we found a key of the requested type */ - if (found->...
2006 May 15
0
[PATCH 4/12] bug fix: openssh-4.3p2 memory leak
...condtional leak. This entire set of patches passed the regression tests on my system. Resource leak bugs found by Coverity. Signed-off-by: Kylene Hall <kjhall at us.ibm.com> --- monitor.c | 4 ++++ 1 files changed, 4 insertions(+) diff -uprN openssh-4.3p2/monitor.c openssh-4.3p2-kylie/monitor.c --- openssh-4.3p2/monitor.c 2005-11-04 22:07:05.000000000 -0600 +++ openssh-4.3p2-kylie/monitor.c 2006-05-08 17:18:15.697809744 -0500 @@ -1010,6 +1010,10 @@ mm_answer_keyallowed(int sock, Buffer *m key_blobtype = type; hostbased_cuser = cuser; hostbased_chost = chost; + } else {...
2006 May 15
0
[PATCH 5/12] bug fix: openssh-4.3p2 scp bugs
...eed. This patch adds the xfree. This entire set of patches passed the regression tests on my system. Bugs found by Coverity. Signed-off-by: Kylene Hall <kjhall at us.ibm.com> --- scp.c | 4 +++- 1 files changed, 3 insertions(+), 1 deletion(-) diff -uprN openssh-4.3p2/scp.c openssh-4.3p2-kylie/scp.c --- openssh-4.3p2/scp.c 2006-01-31 05:11:38.000000000 -0600 +++ openssh-4.3p2-kylie/scp.c 2006-05-08 15:15:04.016516104 -0500 @@ -181,7 +181,8 @@ do_cmd(char *host, char *remuser, char * * Reserve two descriptors so that the real pipes won't get * descriptors 0 and 1 because that w...
2006 May 15
0
[PATCH 6/12] bug fix: openssh-4.3p2 memory leak
...s patch adds the xfree. This entire set of patches passed the regression tests on my system. Resource leak bug found by Coverity. Signed-off-by: Kylene Hall <kjhall at us.ibm.com> --- serverloop.c | 1 + 1 files changed, 1 insertion(+) diff -uprN openssh-4.3p2/serverloop.c openssh-4.3p2-kylie/serverloop.c --- openssh-4.3p2/serverloop.c 2005-12-30 23:33:37.000000000 -0600 +++ openssh-4.3p2-kylie/serverloop.c 2006-05-03 16:52:06.000000000 -0500 @@ -1085,6 +1085,7 @@ server_input_global_request(int type, u_ success = channel_cancel_rport_listener(cancel_address, cancel_port);...
2006 May 15
0
[PATCH 11/12] bugfix: openssh-4.3p2 variable reuse bug
...as not been reset. This entire set of patches passed the regression tests on my system. Bug found by Coverity. Signed-off-by: Kylene Hall <kjhall at us.ibm.com> --- ssh-keygen.c | 4 +++- 1 files changed, 3 insertions(+), 1 deletion(-) diff -uprN openssh-4.3p2/ssh-keygen.c openssh-4.3p2-kylie/ssh-keygen.c --- openssh-4.3p2/ssh-keygen.c 2005-11-28 20:10:25.000000000 -0600 +++ openssh-4.3p2-kylie/ssh-keygen.c 2006-05-03 16:23:38.000000000 -0500 @@ -485,8 +485,10 @@ do_fingerprint(struct passwd *pw) xfree(fp); exit(0); } - if (comment) + if (comment) { xfree(comment); + commen...
2006 May 15
0
[PATCH 12/12] bug fix: openssh 4.3p2 ssh-rand-helper bugs
...close. This entire set of patches passed the regression tests on my system. Bugs found by Coverity. Signed-off-by: Kylene Hall <kjhall at us.ibm.com> --- ssh-rand-helper.c | 4 +++- 1 files changed, 3 insertions(+), 1 deletion(-) diff -uprN openssh-4.3p2/ssh-rand-helper.c openssh-4.3p2-kylie/ssh-rand-helper.c --- openssh-4.3p2/ssh-rand-helper.c 2005-07-17 02:26:44.000000000 -0500 +++ openssh-4.3p2-kylie/ssh-rand-helper.c 2006-05-08 15:22:13.967153672 -0500 @@ -564,7 +564,8 @@ prng_write_seedfile(void) /* Try to ensure that the parent directory is there */ snprintf(filename, sizeof...