Displaying 17 results from an estimated 17 matches for "grassland".
2007 Jul 05
3
data messed up by read.table ? (PR#9779)
...#39;t obtain any improvement.
Please let me know, how I can correct this.
Best regards
Joerg
> worms<-read.table("C:/Programme/R/R-2.5.0/Data/Worms.txt", header = T)
> worms
Field.Name Area Slope Vegetation Soil.pH Damp Worm.density
1 Oak.Mead 3.1 2 Grassland 3.9 F 2
2 Church.Field 3.5 3 Grassland 4.2 F 3
3 Ashurst 2.1 0 Arable 4.8 F 4
4 Field.Name Area Slope Vegetation Soil.pH Damp Worm.density
5 Nash's.Field 3.6 11 Grassland 4.1 F...
2003 Jul 22
1
Making a group membership matrix
...atly should that be easier
to work with.)
> length(foo)
[1] 314482
> foo[1:10]
[1] Montane Chaparral Barren Red Fir Red Fir
[5] Red Fir Red Fir Red Fir Red Fir
[9] Red Fir Red Fir
39 Levels: Alpine-Dwarf Shrub Annual Grassland Aspen Barren ... White
Fir
> summary(foo)
Alpine-Dwarf Shrub Annual Grassland
Aspen
7402 0
582
Barren Bitterbrush Blue
Oak-Foothill Pine
69111...
2011 Nov 11
6
need help
hello all R experts,
how do I calculate the reliability between the two groups
using the ICCs?
I'll appreciate your reply,
Thanks
Sincerely,
Supreet kaur,
Biomedical research engineer,
Nationwide Childrens Hospital,
Columbus, OH
(614)355-3509
[[alternative HTML version deleted]]
2007 Aug 28
1
subcripts on data frames (PR#9885)
...rub
=20
worms[rev(order(Worm.density)),] [!duplicated(Vegetation),]
Field.Name Area Slope Vegetation Soil.pH Damp Worm.density
9 The.Orchard 1.9 0 Orchard 5.7 FALSE 9
16 Water.Meadow 3.9 0 Meadow 4.9 TRUE 8
10 Rookery.Slope 1.5 4 Grassland 5.0 TRUE 7
2 Silwood.Bottom 5.1 2 Arable 5.2 FALSE 7
4 Rush.Meadow 2.4 5 Meadow 4.9 TRUE 5
and here is the correct set of rows, but in the wrong order, using
unique
=20
worms[rev(order(Worm.density)),] [unique(Vegetation),]...
2004 Dec 18
4
variables - data-structure
dear R-friends,
i`ve got a large dataset of vegetation-samples with about 500
variables(=species) in the following format:
1 spec1
1 spec23
1 spec54
1 spec63
2 spec1
2 spec2
2 spec253
2 spec300
2 spec423
3 spec20
3 spec88
3 spec121
3 spec200
3 spec450
.
.
this means: sample 1 (grassland) with the species (=spec) 1, 23, 54, 63
is it possible to get a following data-structure for further analysis?
1 2 3 ......
spec1 1 1 0
spec2 0 1 0
spec3
...
spec253 0 1 0
...
spec450 0 0 1
with thanks from the snowy tirol
helli
2006 Jul 19
1
Random structure of nested design in lme
...e error-term right in aov(), in lme() it appears impossible to get as expected. I would be greatful for any help.
My experiment aimed to identify whether two fixed factors (habitat type and soil type) affect the development of plants. I took soil from six random sites each of two types (arable and grassland) and transplanted them back into the sites of origin in such way that in each of the sites there were six pots containing arable soil and six pots of grassland soil, each containing a seedling.
With aov(), I got the analysis as I expected, with habitat type tested against destination site, and soi...
2010 Oct 24
1
best predictive model for mixed catagorical/continuous variables
...as field size or vegetation height.
I have tried using the TREE package but the models produced seem too
simplistic and discard most variables with the result that there is no
predictive power in the result.
I would expect that there will be interactions between variables eg. if the
vegetation is grassland then the vegetation height variable will mediate the
interaction, if the vegetation is arable then crop type will be more
significant.
Would it be possible to use GLM or GAM models for this type of predictive
modelling?
Any assistance would be greatly appreciated - it's several years since I...
2011 Dec 16
1
Model design
...s which are classfied into ~2000
AREA's and ~750 STATE'S
So my question is do AREA'S differ in the amount of grass they contain
i.e does AREA A contain significantly more grass than AREA B?
I have modelled this by
area_grass <- gls(grass~AREA, correlation=corExp(form=~x+y), data = grassland
I have set the contrasts to options(contrasts = c("contr.treatment",
"contr.poly")) as there are no control groups.
What i will get ( it is taking ages!)
is
AREA A: -0.12.... **
AREA B: 0.17....*
AREA C..
So can i then say AREA A has significantly less grass than...
2006 Aug 23
0
Random structure of nested design in lme
...ctor(habitat)
> destination=factor(destination)
> origin=factor(origin)
> summary(aov(response~soiltype*habitat+Error(destination+origin)))
> anova(lme(response~soiltype*habitat,random=~1|destination/origin))
> #
> #"habitat" type is either 'arable' or 'grassland'
> #"destination" indicates what site the soil was transplanted into, and is considered a random factor within habitat type
> #"soiltype" is either 'arable' or 'grassland'
> #"origin" indicates what site the soil was taken from, and is c...
2009 Nov 03
1
lmer and estimable
...espace (and not attached):
[1] gdata_2.4.2 grid_2.9.2 gtools_2.6.1 MASS_7.2-48 svMisc_0.9-5
Many thanks for any help or advice that anyone can provide :)
Cheers,
Zaneta
____________________________
Zaneta Park
Biometrician
T +64 6 351 8008
E zaneta.park-ng@agresearch.co.nz
AgResearch Limited
Grasslands Research Centre
Tennent Drive, Private Bag 11008, Palmerston North, New Zealand
T +64 6 356 8019 F +64 6 351 8032 www.agresearch.co.nz
Farming Food and Health. First
Te Ahuwhenua Te Kai me te Whai Ora. Tuatahi
=======================================================================
Attention...
2011 Oct 04
2
Adonis and nmds help and questions for a novice.
...this.
I have been trying to use Adonis to find out if there are significant difference between groups on data that I have analyses with NMDS, and have been struggling with getting this to work and understanding what is going on. I am looking at diversity in different soils with either woodland or grassland habitats.
I have run the scripts
library(vegan)
library(ecodist)
library(MASS)
mydata <- read.table("ash_data.csv", header=TRUE, sep=",", row.names="Site")
envdata_fit <- read.table("ash_env.csv", header=TRUE, sep=",", row.names="Site&...
2004 Jan 13
0
Running out of memory
I'm working with large data frames and running out of memory. I hope some
of you may be able to suggest a more efficient approach.
I have grid/lattice data representing a time series of 1 m2 quadrats in a
grassland: Each 1 cm2 cell or pixel contains one ecological state (ie grass
or bare ground). The goal is to calculate, for each cell, the transition
probabilities to all available states (given that a cell is occupied by
grass, what are the probabilities it will change to grass or bare ground in
the nex...
2008 May 17
0
autocorrelation in nlme: Error: cannot allocate vector of size 220979 Kb
...eg*year,
data=a,
random = list(Site=pdDiag(~Veg),
Plot=pdDiag(~Veg))
Dataset:
a-data frame of daily measurements of soil temperature (Soil.temp)
over six years
Site (6 sites),
Plot(2 plots per site),
Veg(2 vegetation types: 2 sites as grassland, 4 sites as forest)
M-month (categorical predictor)
year (continues)
Thanks,
Julia
P.S. I a sorry if this message showed up a few times, since I had
trouble posting it.
[[alternative HTML version deleted]]
2002 Jul 22
1
TechTV News advises consumers
TechTV News advises consumers of Open Vorbis being better then mp3's in
both quality and at a reduced file size.
(Tue Jul 23 00:09:18 EDT 2002)
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2010 Apr 26
2
Using optim function for logistic model simulation
Hello!
I'm a college undergrad desperately trying to finish up my thesis. I
have a dataset on the distribution of a grassland bird from the
Breeding Bird Survey. I have a very straightforward and simple version
of the logistic growth model to describe changes in this bird's
abundance over time. The variables are the natural birth rate,
mortality, and carrying capacity. The equation itself looks like this:
birds <-...
2002 Jul 13
3
wow! and what about h/w players for vorbis files?
wow! i must say vorbis deprecates mp3! lol.
although, i had to use the "OSS/3d for XMMS" plugin on my sblive value
w/ 4 point sound to get a proper base. On my other box with a diff card,
bass is just fine.
however, are there any h/w players for vorbis files? the faq only states
one manufacturer called iObjects but i see no portable players!
Basically, i want to player vorbis files
2011 Sep 15
1
TOP and Rayman 3 wine 1.3.28
...uest: [Smuggle Tortoise Shells>> ID[617] Type[1]
Set Quest: [A Terrible Curse>> ID[618] Type[1]
Set Quest: [Boar Independence Day>> ID[619] Type[1]
Set Quest: [Boar Challenge>> ID[620] Type[1]
Set Quest: [Expensive Herbs>> ID[621] Type[1]
Set Quest: [Secret of the Grassland Elk>> ID[622] Type[1]
Set Quest: [Deer Skin Coat>> ID[623] Type[1]
Set Quest: [White Owlie>> ID[624] Type[1]
Set Quest: [Revenge>> ID[625] Type[1]
Set Quest: [Pursue of the Wolf>> ID[626] Type[1]
Set Quest: [Cruel Massacre>> ID[627] Type[1]
Set Quest: [Boxi...